CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJB6_XENTR (DnaJ homolog subfamily B member 6 OS=Xenopus tropicalis GN=dnajb6 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 54/102 (52.94%), Postives = 65/102 (63.73%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK-----QHAAXXXXXXXXXVNIQDIFSSFFGG 537
            YY+VL V R AS E IK+AYRKLALK+HPDKN  N +EA +RF E+  AYEVLSDS+ R+IYD YG+EGL       H            +  D+F  FFGG
Sbjct:    4 YYDVLGVQRNASPEDIKKAYRKLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLTGGGGGSHFDNPYEFGFTFRSPDDVFRDFFGG 105          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJB6_BOVIN (DnaJ homolog subfamily B member 6 OS=Bos taurus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 54/103 (52.43%), Postives = 66/103 (64.08%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK------QHAAXXXXXXXXXVNIQDIFSSFFGG 537
            YYEVL V R AS E IK+AYRKLALK+HPDKN  N EEA ++F ++  AYEVLSD++ R+IYD YG+EGL        H            N +D+F  FFGG
Sbjct:    4 YYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDRYGKEGLNGGGGGGSHFDSPFEFGFTFRNPEDVFREFFGG 106          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_THETN (Chaperone protein dnaJ OS=Thermoanaerobacter tengcongensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 56/148 (37.84%), Postives = 78/148 (52.70%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN------------IQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            K  YE+L V R AS E+IK+AYR+LA KYHPD N G++EA ++F EIN AYE+LSD + R  YD +G    +Q  +                         DIFS FFG G  + ++   KG D+  +L  T E+   G   ++  E+
Sbjct:    4 KDLYEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFEQGGSQQGGFGDFGEGGFDFDFGGFGDIFGDIFSDFFGTGRRKAEKGPKKGADIRYDLTLTFEEAAFGTEKEIEVER 151          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_THESQ (Chaperone protein dnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK------QHAAXXXXXXXXXVNI--QDIFSSFFGGGPMEED--EKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            K YYE+L VPR A+ E+IKRAY++L  ++HPD++  N +EA +RF EI  AYEVLSD + R +YD +G  G +      +             NI  +DIF  FFG  P +E+  E   +G+D+  E++ TL DL  G  + V  E+
Sbjct:    6 KDYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPTYQETESGGFFDDIFREFENIFNRDIFDVFFGERPHQEERREYARRGEDIRYEIEVTLSDLINGAEIPVEYER 152          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_THEMA (Chaperone protein dnaJ OS=Thermotoga maritima GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK------QHAAXXXXXXXXXVNI--QDIFSSFFGGGPMEED--EKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            K YYE+L VPR A+ E+IKRAY++L  ++HPD++  N +EA +RF EI  AYEVLSD + R +YD +G  G +      +             NI  +DIF  FFG  P +E+  E   +G+D+  E++ TL DL  G  + V  E+
Sbjct:    6 KDYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPTYQETESGGFFDDIFRDFENIFNRDIFDVFFGERPHQEERREYARRGEDIRYEIEVTLSDLINGAEIPVEYER 152          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALTY (Chaperone protein dnaJ OS=Salmonella typhimurium GN=dnaJ PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALTI (Chaperone protein dnaJ OS=Salmonella typhi GN=dnaJ PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALSV (Chaperone protein dnaJ OS=Salmonella schwarzengrund (strain CVM19633) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALPC (Chaperone protein dnaJ OS=Salmonella paratyphi C (strain RKS4594) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALPB (Chaperone protein dnaJ OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 134          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJB6_XENTR1.939e-2052.94DnaJ homolog subfamily B member 6 OS=Xenopus tropi... [more]
DNJB6_BOVIN1.939e-2052.43DnaJ homolog subfamily B member 6 OS=Bos taurus GN... [more]
DNAJ_THETN1.939e-2037.84Chaperone protein dnaJ OS=Thermoanaerobacter tengc... [more]
DNAJ_THESQ1.939e-2040.14Chaperone protein dnaJ OS=Thermotoga sp. (strain R... [more]
DNAJ_THEMA1.939e-2040.14Chaperone protein dnaJ OS=Thermotoga maritima GN=d... [more]
DNAJ_SALTY1.939e-2037.50Chaperone protein dnaJ OS=Salmonella typhimurium G... [more]
DNAJ_SALTI1.939e-2037.50Chaperone protein dnaJ OS=Salmonella typhi GN=dnaJ... [more]
DNAJ_SALSV1.939e-2037.50Chaperone protein dnaJ OS=Salmonella schwarzengrun... [more]
DNAJ_SALPC1.939e-2037.50Chaperone protein dnaJ OS=Salmonella paratyphi C (... [more]
DNAJ_SALPB1.939e-2037.50Chaperone protein dnaJ OS=Salmonella paratyphi B (... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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