CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALNS (Chaperone protein dnaJ OS=Salmonella newport (strain SL254) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALHS (Chaperone protein dnaJ OS=Salmonella heidelberg (strain SL476) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALG2 (Chaperone protein dnaJ OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALEP (Chaperone protein dnaJ OS=Salmonella enteritidis PT4 (strain P125109) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALDC (Chaperone protein dnaJ OS=Salmonella dublin (strain CT_02021853) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALCH (Chaperone protein dnaJ OS=Salmonella choleraesuis GN=dnaJ PE=3 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALA4 (Chaperone protein dnaJ OS=Salmonella agona (strain SL483) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PROMH (Chaperone protein dnaJ OS=Proteus mirabilis (strain HI4320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 50/135 (37.04%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ-----HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + +YEVL + + A +++IKRAY++LA+KYHPD+NQG++++  +F EI  AYEVLSD + R  YD YG    +Q                     D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDFYEVLGLSKTADEKEIKRAYKRLAMKYHPDRNQGDKDSESKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGFGGQGGGGFGGADFSDIFGDVFGDIFGGG--RRQQRAARGSDLQYNMDLTLEEAVRG 133          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_NITEC (Chaperone protein dnaJ OS=Nitrosomonas eutropha (strain C91) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 60/150 (40.00%), Postives = 77/150 (51.33%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFG--GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKML*ASPRQRRCN 687
            + YYEVL V R A + ++K+ YRKLA+KYHPD+N G+ +A +RF EI  AYEVLSDS  R  YD +G  GL                  DIFS  FG  GG       + +G D+   L+ TLE    G   K+         PRQ  C+
Sbjct:    4 RDYYEVLGVGRDADESELKKVYRKLAMKYHPDRNAGDAKAEERFKEIKEAYEVLSDSNKRAAYDQFGHAGLNGGVGGAGAQGFSDA-FSDIFSDLFGMRGGGR---SSVHRGADLRYNLEITLEQAARGTETKI-------RIPRQEACD 142          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_BURXL (Chaperone protein dnaJ OS=Burkholderia xenovorans (strain LB400) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 55/140 (39.29%), Postives = 77/140 (55.00%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQH--AAXXXXXXXXXVNIQDIFSSFFG--------GGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYEVL V + ASD++IK+AYRKLA+K+HPD+N GN++A   F E+  AYE+LSDS+ R  YD YG  G+  +   A             DIF   FG        GG      ++ +G D+   ++ TLE    G
Sbjct:    1 MAKRDYYEVLGVAKNASDDEIKKAYRKLAMKHHPDRNPGNKDAEGHFKEVKEAYEMLSDSQKRAAYDQYGHAGVDPNMGGAGAQGFGGFADAFGDIFGDIFGQAAGGAARGGGGRAGPQVYRGADLRYSMEITLEQAAHG 140          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_SALNS1.939e-2037.50Chaperone protein dnaJ OS=Salmonella newport (stra... [more]
DNAJ_SALHS1.939e-2037.50Chaperone protein dnaJ OS=Salmonella heidelberg (s... [more]
DNAJ_SALG21.939e-2037.50Chaperone protein dnaJ OS=Salmonella gallinarum (s... [more]
DNAJ_SALEP1.939e-2037.50Chaperone protein dnaJ OS=Salmonella enteritidis P... [more]
DNAJ_SALDC1.939e-2037.50Chaperone protein dnaJ OS=Salmonella dublin (strai... [more]
DNAJ_SALCH1.939e-2037.50Chaperone protein dnaJ OS=Salmonella choleraesuis ... [more]
DNAJ_SALA41.939e-2037.50Chaperone protein dnaJ OS=Salmonella agona (strain... [more]
DNAJ_PROMH1.939e-2037.04Chaperone protein dnaJ OS=Proteus mirabilis (strai... [more]
DNAJ_NITEC1.939e-2040.00Chaperone protein dnaJ OS=Nitrosomonas eutropha (s... [more]
DNAJ_BURXL1.939e-2039.29Chaperone protein dnaJ OS=Burkholderia xenovorans ... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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