CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_BUCAP (Chaperone protein dnaJ OS=Buchnera aphidicola subsp. Schizaphis graminum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 49/141 (34.75%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYG----EEGLKQHAAXXXXXXXXXVN--IQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A K YY++L +P+ A + +IK+AY++LA+KYHPD+NQG++ A  +F EI  AYE+L + E R  YD YG    E G  Q+                 D+F   FGG     ++++ KG D+   ++ +LE+   G + ++
Sbjct:    1 MAKKDYYQILGIPKSAEEREIKKAYKRLAMKYHPDRNQGDKNAENKFKEIKEAYEILINEEKRTAYDQYGHAAFENGYNQNNTYSTFTSSTDFGDIFGDVFGDIFGG---SRNQRVKKGADLCYNMEISLEEAVKGTTKEI 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPA (Chaperone protein dnaJ OS=Bordetella parapertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN------IQDIFSSFF------GGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYEVL V + ASDE +K+AYRKLA+KYHPD+N  ++EA ++F E   AYEVL D + R  YD YG  G+  +AA         +         DIF   F      GGGP     ++ +G D+   L+ TLE    G
Sbjct:    1 MAKRDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNAAGMGGGMGGGMGGGFADAFGDIFGEIFGAGRRGGGGP-----QVYRGADLKYALEITLEQAASG 137          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_BORBR (Chaperone protein dnaJ OS=Bordetella bronchiseptica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 57/138 (41.30%), Postives = 76/138 (55.07%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXV--NIQDIFSSFF------GGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYEVL V + ASDE +K+AYRKLA+KYHPD+N  ++EA ++F E   AYEVL D + R  YD YG  G+  +AA               DIF   F      GGGP     ++ +G D+   L+ TLE    G
Sbjct:    1 MAKRDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNAAGMGGGMGGGFADAFGDIFGEIFGAGRRGGGGP-----QVYRGADLKYALEITLEQAASG 133          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ALHEH (Chaperone protein dnaJ OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 52/139 (37.41%), Postives = 74/139 (53.24%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN-------IQDIFSSFFGGGPME--EDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            YYE L V R ASD +IK+AYR++A+KYHPD+N G++EA  RF E   AYE+LSD + R  YD +G  G+   A                     D+F   FGGG        ++ +G D+   L+ +LED   G  +++
Sbjct:    6 YYEALGVARNASDSEIKKAYRRMAMKYHPDRNPGDKEAEARFKEAKEAYEILSDPQKRAAYDQFGHAGVDPSAGMGGAGGPGGPGGPDFADIFSDVFGDIFGGGGRRGGGGRRVFRGADLRYNLELSLEDAVRGTEVQI 144          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJB6_PONAB (DnaJ homolog subfamily B member 6 OS=Pongo abelii GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 54/103 (52.43%), Postives = 65/103 (63.11%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK------QHAAXXXXXXXXXVNIQDIFSSFFGG 537
            YYEVL V R AS E IK+AYRKLALK+HPDKN  N EEA ++F ++  AYEVLSD++ R+IYD YG+EGL        H            N  D+F  FFGG
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGG 106          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJB6_MACFA (DnaJ homolog subfamily B member 6 OS=Macaca fascicularis GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 54/103 (52.43%), Postives = 65/103 (63.11%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK------QHAAXXXXXXXXXVNIQDIFSSFFGG 537
            YYEVL V R AS E IK+AYRKLALK+HPDKN  N EEA ++F ++  AYEVLSD++ R+IYD YG+EGL        H            N  D+F  FFGG
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGG 106          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJB6_HUMAN (DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 54/103 (52.43%), Postives = 65/103 (63.11%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK------QHAAXXXXXXXXXVNIQDIFSSFFGG 537
            YYEVL V R AS E IK+AYRKLALK+HPDKN  N EEA ++F ++  AYEVLSD++ R+IYD YG+EGL        H            N  D+F  FFGG
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGG 106          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBF1 (Chaperone protein dnaJ OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 48/131 (36.64%), Postives = 76/131 (58.02%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            + +YEVL V R AS+  IK+AY++LA+K+HPD+NQG++ A ++F E+  AYE+L+D++ R+ YD YG    +Q             +  DI    F   FGGG     ++  +G D+   ++ TLE+   G
Sbjct:    4 RDFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDDTAAEKFKEVKVAYEILTDAQKRSAYDQYGHAAFEQGGMGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGQQRAQRGSDLRYNMELTLEEAGRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_THEP1 (Chaperone protein dnaJ OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK------QHAAXXXXXXXXXVNI--QDIFSSFFGGGPMEED--EKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            K YYE+L VPR A+ E+IKRAY++L  ++HPD++  N +EA +RF EI  AYEVLSD + R +YD +G  G +      +             NI  +DIF  FFG  P +E+  E   +G+D+  E++ TL DL  G  + V  E+
Sbjct:    6 KDYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPTYQETESGGFFEDIFKEFENIFNRDIFDVFFGERPGQEEKREYARRGEDIRYEIEVTLSDLINGAEIPVEYER 152          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SHISS (Chaperone protein dnaJ OS=Shigella sonnei (strain Ss046) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGG--GPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+ R  YD YG    +Q             +  DIF   FG   G     ++  +G D+   ++ TLE+   G
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ-GGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRG 131          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_BUCAP1.939e-2034.75Chaperone protein dnaJ OS=Buchnera aphidicola subs... [more]
DNAJ_BORPA1.939e-2040.14Chaperone protein dnaJ OS=Bordetella parapertussis... [more]
DNAJ_BORBR1.939e-2041.30Chaperone protein dnaJ OS=Bordetella bronchiseptic... [more]
DNAJ_ALHEH1.939e-2037.41Chaperone protein dnaJ OS=Alkalilimnicola ehrliche... [more]
DNJB6_PONAB2.532e-2052.43DnaJ homolog subfamily B member 6 OS=Pongo abelii ... [more]
DNJB6_MACFA2.532e-2052.43DnaJ homolog subfamily B member 6 OS=Macaca fascic... [more]
DNJB6_HUMAN2.532e-2052.43DnaJ homolog subfamily B member 6 OS=Homo sapiens ... [more]
DNAJ_VIBF12.532e-2036.64Chaperone protein dnaJ OS=Vibrio fischeri (strain ... [more]
DNAJ_THEP12.532e-2040.14Chaperone protein dnaJ OS=Thermotoga petrophila (s... [more]
DNAJ_SHISS2.532e-2038.64Chaperone protein dnaJ OS=Shigella sonnei (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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