CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SHIDS (Chaperone protein dnaJ OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 1 
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGG--GPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+ R  YD YG    +Q             +  DIF   FG   G     ++  +G D+   ++ TLE+   G
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ-GGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRG 131
[Close]
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SHIBS (Chaperone protein dnaJ OS=Shigella boydii serotype 4 (strain Sb227) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 1 
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGG--GPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+ R  YD YG    +Q             +  DIF   FG   G     ++  +G D+   ++ TLE+   G
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ-GGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRG 131
[Close]
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SHIB3 (Chaperone protein dnaJ OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 1 
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGG--GPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+ R  YD YG    +Q             +  DIF   FG   G     ++  +G D+   ++ TLE+   G
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ-GGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRG 131
[Close]
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEHT (Chaperone protein dnaJ OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 47/138 (34.06%), Postives = 74/138 (53.62%), Query Frame = 1 
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ------HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYEVL V + AS+  IK+AY++LA+KYHPD+  G++E   +F E+  AYE+L+D++ R  YD YG    +Q      H               D+F   FGGG      +  +G D+   +D +LE+   G  +++
Sbjct:    4 RDYYEVLGVSKDASERDIKKAYKRLAMKYHPDRTSGDKELETKFKEVKEAYEILTDAQKRQTYDQYGHAAFEQGGGGGGHGGFGGGHGDFGDVFGDVFGDIFGGGGGRRQSRQQRGSDLRYNMDLSLEEAVRGKEVEI 141
[Close]
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMF (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 54/135 (40.00%), Postives = 76/135 (56.30%), Query Frame = 1 
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEE-----GLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            ++ + +Y  L V R A+D++IK+AYRKLA+KYHPD+N  N+EA ++F E+  AYE LSD E R +YD YG       G                +  DIFS  FGGG     +   +G+DV V ++ TLE+   G
Sbjct:    1 MSNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGGG-SGRAQPDYQGEDVQVGIEITLEEAAKG 134
[Close]
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMB (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup B GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 54/135 (40.00%), Postives = 76/135 (56.30%), Query Frame = 1 
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEE-----GLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            ++ + +Y  L V R A+D++IK+AYRKLA+KYHPD+N  N+EA ++F E+  AYE LSD E R +YD YG       G                +  DIFS  FGGG     +   +G+DV V ++ TLE+   G
Sbjct:    1 MSNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGGG-SGRAQPDYQGEDVQVGIEITLEEAAKG 134
[Close]
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMA (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup A GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 54/135 (40.00%), Postives = 76/135 (56.30%), Query Frame = 1 
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEE-----GLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            ++ + +Y  L V R A+D++IK+AYRKLA+KYHPD+N  N+EA ++F E+  AYE LSD E R +YD YG       G                +  DIFS  FGGG     +   +G+DV V ++ TLE+   G
Sbjct:    1 MSNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGGG-SGRAQPDYQGEDVQVGIEITLEEAAKG 134
[Close]
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIM0 (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup C (strain 053442) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 54/135 (40.00%), Postives = 76/135 (56.30%), Query Frame = 1 
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEE-----GLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            ++ + +Y  L V R A+D++IK+AYRKLA+KYHPD+N  N+EA ++F E+  AYE LSD E R +YD YG       G                +  DIFS  FGGG     +   +G+DV V ++ TLE+   G
Sbjct:    1 MSNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGGG-SGRAQPDYQGEDVQVGIEITLEEAAKG 134
[Close]
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ESCF3 (Chaperone protein dnaJ OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 1 
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGG--GPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+ R  YD YG    +Q             +  DIF   FG   G     ++  +G D+   ++ TLE+   G
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ-GGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRG 131
[Close]
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOUT (Chaperone protein dnaJ OS=Escherichia coli (strain UTI89 / UPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 1 
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGG--GPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+ R  YD YG    +Q             +  DIF   FG   G     ++  +G D+   ++ TLE+   G
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ-GGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRG 131
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_SHIDS2.532e-2038.64Chaperone protein dnaJ OS=Shigella dysenteriae ser... [more]
DNAJ_SHIBS2.532e-2038.64Chaperone protein dnaJ OS=Shigella boydii serotype... [more]
DNAJ_SHIB32.532e-2038.64Chaperone protein dnaJ OS=Shigella boydii serotype... [more]
DNAJ_PSEHT2.532e-2034.06Chaperone protein dnaJ OS=Pseudoalteromonas halopl... [more]
DNAJ_NEIMF2.532e-2040.00Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIMB2.532e-2040.00Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIMA2.532e-2040.00Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIM02.532e-2040.00Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_ESCF32.532e-2038.64Chaperone protein dnaJ OS=Escherichia fergusonii (... [more]
DNAJ_ECOUT2.532e-2038.64Chaperone protein dnaJ OS=Escherichia coli (strain... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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