CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PARUW (Chaperone protein dnaJ OS=Protochlamydia amoebophila (strain UWE25) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGG 540
            YYE+L+V RGA+ E+IK+AYRK A++YHPDKN G+ +A KRF EI+ AYEVLSD + R +YD YG+E L+  A            ++    +F  GG
Sbjct:    4 YYEILEVARGATPEEIKKAYRKKAVQYHPDKNPGDADAEKRFKEISEAYEVLSDEKKRQVYDRYGKEALQGAAGGGQGFSSMDEALRTFMGAFGMGG 100          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLP8 (Chaperone protein dnaJ OS=Chlorobaculum parvum (strain NCIB 8327) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 60/155 (38.71%), Postives = 78/155 (50.32%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA----XXXXXXXXXVNIQDIFSSFFGGG-------PMEEDEKI-----------------VKGDDVIVELDATLEDLYMG 624
            + YYE+L V R A  ++IK+AYRKLALKYHPDKN  N+EA ++F E N AYEVLS+ + R  YD +G  G+   AA              +I DIF  F GGG       P    E I                 + G D+ + L  TLE++  G
Sbjct:    3 RDYYEILGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEANEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGPGGFGGGGYADINDIFEMFTGGGRARGGGSPFSGFEDIFGGGFSGGGGRRARSTGIHGTDLKIRLKLTLEEIAKG 157          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ARCB4 (Chaperone protein dnaJ OS=Arcobacter butzleri (strain RM4018) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 49/120 (40.83%), Postives = 70/120 (58.33%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLE 609
            YYE+L++ R +    IK+AYR++A+KYHPDKN G+ EA ++F  IN AY+VLSD E ++IYD YG+ GL+ H            ++  IF   FG G      +  K  +    LD T+E
Sbjct:    6 YYELLEISRNSDKSTIKKAYRQMAMKYHPDKNPGDNEAEEKFKAINEAYQVLSDDEKKSIYDRYGKAGLEGHGQRGGGFSGGFDDLGSIFEEMFGFGTSSRSRRERKTYN--YNLDVTIE 123          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAW (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MW2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK-------QHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYEVL + + AS ++IK+AYRKL+ KYHPD N+  E A+++F EI+ AYEVLSD   R  YD +G +G +         +             +DIFSSFFGGG   +     KGDD+   +  T E+   G + ++
Sbjct:    1 MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAT (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK-------QHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYEVL + + AS ++IK+AYRKL+ KYHPD N+  E A+++F EI+ AYEVLSD   R  YD +G +G +         +             +DIFSSFFGGG   +     KGDD+   +  T E+   G + ++
Sbjct:    1 MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAS (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MSSA476) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK-------QHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYEVL + + AS ++IK+AYRKL+ KYHPD N+  E A+++F EI+ AYEVLSD   R  YD +G +G +         +             +DIFSSFFGGG   +     KGDD+   +  T E+   G + ++
Sbjct:    1 MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAR (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MRSA252) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK-------QHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYEVL + + AS ++IK+AYRKL+ KYHPD N+  E A+++F EI+ AYEVLSD   R  YD +G +G +         +             +DIFSSFFGGG   +     KGDD+   +  T E+   G + ++
Sbjct:    1 MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAN (Chaperone protein dnaJ OS=Staphylococcus aureus (strain N315) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK-------QHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYEVL + + AS ++IK+AYRKL+ KYHPD N+  E A+++F EI+ AYEVLSD   R  YD +G +G +         +             +DIFSSFFGGG   +     KGDD+   +  T E+   G + ++
Sbjct:    1 MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAM (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK-------QHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYEVL + + AS ++IK+AYRKL+ KYHPD N+  E A+++F EI+ AYEVLSD   R  YD +G +G +         +             +DIFSSFFGGG   +     KGDD+   +  T E+   G + ++
Sbjct:    1 MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAE (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Newman) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK-------QHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYEVL + + AS ++IK+AYRKL+ KYHPD N+  E A+++F EI+ AYEVLSD   R  YD +G +G +         +             +DIFSSFFGGG   +     KGDD+   +  T E+   G + ++
Sbjct:    1 MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEI 141          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PARUW3.307e-2048.45Chaperone protein dnaJ OS=Protochlamydia amoebophi... [more]
DNAJ_CHLP83.307e-2038.71Chaperone protein dnaJ OS=Chlorobaculum parvum (st... [more]
DNAJ_ARCB43.307e-2040.83Chaperone protein dnaJ OS=Arcobacter butzleri (str... [more]
DNAJ_STAAW4.319e-2038.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAT4.319e-2038.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAS4.319e-2038.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAR4.319e-2038.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAN4.319e-2038.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAM4.319e-2038.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAE4.319e-2038.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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