CX296527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEMY (Chaperone protein dnaJ OS=Pseudomonas mendocina (strain ymp) GN=dnaJ PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22 Identity = 56/139 (40.29%), Postives = 79/139 (56.83%), Query Frame = 1 Query: 235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639 +A + YYEVL V RGAS+ ++K+AYR+LA+KYHPD+N ++ A ++F E N AYEVLSD+ R+ YD YG G+ N DI FS FFGGG +G D+ L+ LE+ G ++ + Sbjct: 1 MAKRDYYEVLGVERGASEAELKKAYRRLAMKYHPDRNPDDKGAEEKFKEANEAYEVLSDAGKRSAYDQYGHAGVDPQMGGGGGAGFGGANFSDIFGDVFSDFFGGGRGGSRGGAQRGSDLRYTLELDLEEAVRGTTVTI 139
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMJR (Chaperone protein dnaJ OS=Campylobacter jejuni (strain RM1221) GN=dnaJ PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22 Identity = 60/134 (44.78%), Postives = 79/134 (58.96%), Query Frame = 1 Query: 247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA-AXXXXXXXXXVNIQDIFSSFFGGG-------PMEEDEKIVKGDDVIVELDATLEDLYMG 624 SYYE+L++ + A E IK+AYRK+ALKYHPD+NQG++EA +F +N AYEVLS+ E R IYD YG++ LK ++ DIFSSFFG G DEKI D IV L + ++ G Sbjct: 4 SYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGKDALKGGGFGSSSSGFGGFEDLGDIFSSFFGEGFGSSRRRKSSNDEKI--PSDFIVNLKLSFKEAVFG 135
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMJE (Chaperone protein dnaJ OS=Campylobacter jejuni GN=dnaJ PE=3 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22 Identity = 60/134 (44.78%), Postives = 79/134 (58.96%), Query Frame = 1 Query: 247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA-AXXXXXXXXXVNIQDIFSSFFGGG-------PMEEDEKIVKGDDVIVELDATLEDLYMG 624 SYYE+L++ + A E IK+AYRK+ALKYHPD+NQG++EA +F +N AYEVLS+ E R IYD YG++ LK ++ DIFSSFFG G DEKI D IV L + ++ G Sbjct: 4 SYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGKDALKGGGFGSSSSGFGGFEDLGDIFSSFFGEGFGSSRRRKSSNDEKI--PSDFIVNLKLSFKEAVFG 135
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_THICR (Chaperone protein dnaJ OS=Thiomicrospira crunogena (strain XCL-2) GN=dnaJ PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22 Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639 + YYE+L+V AS+ +IK+AYRKLA++YHPD+N +EEA +F E + AYEVLSD++ R YD +G G+ A + DIF FGGG G D+ EL+ +LED G ++ V Sbjct: 4 RDYYEILEVSATASEGEIKKAYRKLAMRYHPDRNPDDEEAEDKFKEASEAYEVLSDAQKRQAYDQFGHAGVDGSAGQGGFGGGGFADFGDIFGDIFGGGFGGGHRGPQPGSDLQYELEVSLEDAVAGTTVDV 135
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEAE (Chaperone protein dnaJ OS=Pseudomonas aeruginosa GN=dnaJ PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22 Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 1 Query: 235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEK--IVKGDDVIVELDATLEDLYMGGSLKV 639 +A + +YEVL V RGAS+ +K+AYR+LA+KYHPD+N G++EA +F E N AYEVLSD+ R YD YG G+ + + DI FS FFGGG + +G D+ LD LE+ G ++ + Sbjct: 1 MAKRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFSDFFGGGGARGGSRGGAQRGADLRYTLDLDLEEAVRGTTVTI 141
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEAB (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=dnaJ PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22 Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 1 Query: 235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEK--IVKGDDVIVELDATLEDLYMGGSLKV 639 +A + +YEVL V RGAS+ +K+AYR+LA+KYHPD+N G++EA +F E N AYEVLSD+ R YD YG G+ + + DI FS FFGGG + +G D+ LD LE+ G ++ + Sbjct: 1 MAKRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFSDFFGGGGARGGSRGGAQRGADLRYTLDLDLEEAVRGTTVTI 141
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEA8 (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain LESB58) GN=dnaJ PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22 Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 1 Query: 235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEK--IVKGDDVIVELDATLEDLYMGGSLKV 639 +A + +YEVL V RGAS+ +K+AYR+LA+KYHPD+N G++EA +F E N AYEVLSD+ R YD YG G+ + + DI FS FFGGG + +G D+ LD LE+ G ++ + Sbjct: 1 MAKRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFSDFFGGGGARGGSRGGAQRGADLRYTLDLDLEEAVRGTTVTI 141
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CLONN (Chaperone protein dnaJ OS=Clostridium novyi (strain NT) GN=dnaJ PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22 Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK--QHAAXXXXXXXXXVNIQDIFSSFFGGG-PMEEDEKIVKGDDVIVELDATLEDLYMG 624 +A K YYEVL + +GASD++IK+AYRKLA+KYHPD+NQGN+EA ++F +IN AY+VLSD + + YD +G +DIF SFFGGG +G D+ + T E+ G Sbjct: 1 MASKDYYEVLGLSKGASDDEIKKAYRKLAMKYHPDRNQGNKEAEEKFKDINEAYQVLSDPQKKANYDQFGSADFNGGGFGGFGGGGFSGMGGFEDIFDSFFGGGFSSRRRNGPERGADLEYTVSLTFEEAVFG 133
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOAB (Chaperone protein dnaJ OS=Clostridium acetobutylicum GN=dnaJ PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22 Identity = 56/137 (40.88%), Postives = 81/137 (59.12%), Query Frame = 1 Query: 235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA--AXXXXXXXXXVNIQDIFSSFFGGG-----PMEEDEKIVKGDDVIVELDATLEDLYMG 624 +A K YYEVL + +GASD++IK+A+RKLA+KYHPDKN+GN+EA ++F EIN AY+VLSD + + YD +G ++ DIF+SFFGGG + +G+D+ + T E+ G Sbjct: 1 MANKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNRGNKEAEEKFKEINEAYQVLSDPDKKANYDRFGTADFNGGGGFGDFSGGFGDFGDLGDIFNSFFGGGFSGGSSRARKDAPQRGNDMEYSISLTFEEAVFG 137
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMJ8 (Chaperone protein dnaJ OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=dnaJ PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22 Identity = 60/135 (44.44%), Postives = 79/135 (58.52%), Query Frame = 1 Query: 247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA-AXXXXXXXXXVNIQDIFSSFFGGG--------PMEEDEKIVKGDDVIVELDATLEDLYMG 624 SYYE+L++ + A E IK+AYRK+ALKYHPD+NQG++EA +F +N AYEVLS+ E R IYD YG++ LK ++ DIFSSFFG G DEKI D IV L + ++ G Sbjct: 4 SYYEILEITQSADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGKDALKGGGFGSSSSGFGGFEDLGDIFSSFFGEGFGSSSRRRKSSNDEKI--PSDFIVNLKLSFKEAVFG 136 The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bpback to top |