CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: CSP_TORCA (Cysteine string protein OS=Torpedo californica PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.280e-18
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 1
Query:  238 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL 456
            +G S Y VL + + AS E IK++YRKLALKYHPDKN  N EA+++F EINNA+ +L+D+  RNIYD YG  GL
Sbjct:   12 SGDSLYIVLGLDKNASPEDIKKSYRKLALKYHPDKNPDNPEASEKFKEINNAHAILTDATKRNIYDKYGSLGL 84          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_XANP2 (Chaperone protein dnaJ OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 49/139 (35.25%), Postives = 73/139 (52.52%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXV-NIQDIFSSFFGGGPME---EDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYE L   RGA D  +K +YRKLA+K+HPD++QGN EA   F E+N AYEVL D + R  YD +G    +               +  DIF   FGG         ++  +G D+   ++ TLE+ + G + ++
Sbjct:    1 MAKRDYYETLGCDRGADDTVLKASYRKLAMKWHPDRSQGNGEAEVMFKEVNEAYEVLKDPQKRAAYDRFGHAAFENGGGGGPGFGNDFASSFADIFDDLFGGAMNRGRGGGQQRGRGADLRYNMEITLEEAFSGKTAQI 139          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_THENN (Chaperone protein dnaJ OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 56/148 (37.84%), Postives = 84/148 (56.76%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTY---GEEGLKQHA----AXXXXXXXXXVNI--QDIFSSFFG--GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            K YYE+L VPR A+ E+I++AY++L  ++HPD++  N +EA +RF EI  AYEVLSD + R +YD +   GE+ + Q A    +          NI  +DIF  FFG   G  E  E   +G+D+   ++  L DL  G  + +  E+
Sbjct:    6 KDYYEILGVPRNATQEEIRKAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPVYQEAETGGSFFEDVFREFENIFNRDIFDVFFGEESGRRERREYARRGEDIRYTIEVNLSDLINGTEIPIEYER 153          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEU2 (Chaperone protein dnaJ OS=Pseudomonas syringae pv. syringae (strain B728a) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 53/144 (36.81%), Postives = 76/144 (52.78%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL--KQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEED---EKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYEVL V RG+S+  +K+AYR+LA+K+HPD+N  ++ + + F E N AYEVLSD+  R  YD YG  G+                 N  DI    FS FFGGG            +G D+   L+  LE+   G ++ +
Sbjct:    1 MAKRDYYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDDKASEELFKEANEAYEVLSDASKRAAYDQYGHAGVDPSMGGGGGFGGGAGGANFSDIFGDVFSDFFGGGRAGGGGGRGGAQRGSDLRYTLELNLEEAVRGTNVNI 144          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_METPP (Chaperone protein dnaJ OS=Methylibium petroleiphilum (strain PM1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 51/145 (35.17%), Postives = 79/145 (54.48%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN--EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQH-----AAXXXXXXXXXVNIQDIFSSFFGGGPMEE---DEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYE L V + AS+E IK+AYRKLA+K+HPD+NQG+  ++A + F E   AYE+LSD++ R  YD YG  G+  +     A              DIF   FG          +++ +G+D+   ++ TLE+   G   ++
Sbjct:    1 MAKRDYYETLGVAKNASEEDIKKAYRKLAMKHHPDRNQGDGAKKAEESFKEAKEAYEMLSDAQKRAAYDQYGHAGVDPNMGGRGAGGPEAYGGFAEAFGDIFGDIFGQNGQRRGPGGQQVYRGNDLSYAMEITLEEAARGKDTQI 145          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_HAMD5 (Chaperone protein dnaJ OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 48/134 (35.82%), Postives = 76/134 (56.72%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN--IQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            K YYE+L + + A+++ IK AY++LA KYHPD+N+ +++A  +F E+  AYEVLSD + R  YD +G    +Q             +    D+FS FFGG      ++  +G D+   L+ TLE+   G S ++
Sbjct:    4 KDYYEILGIAKNANEQDIKDAYKRLAKKYHPDRNK-DKDAETKFKEMKEAYEVLSDQQKRAAYDQHGHTAFEQSGMGGGFHNSSNFSNVFNDVFSDFFGG----HQQRTQRGRDLRYTLNLTLEEAVRGASKEI 132          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_EUBE2 (Chaperone protein dnaJ OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 54/139 (38.85%), Postives = 73/139 (52.52%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA--AXXXXXXXXXVNIQDIFSSFF-----GGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYEVL VP+ A D  IK+AYR+LA KYHPD N G++EA  +F E + AY VLSD+E R  YD +G    +  A  A          ++ DIF   F     GGG         +G DV V +  T ++   G + K+
Sbjct:    5 RDYYEVLGVPKDADDAAIKKAYRQLAKKYHPDMNPGDKEAEIKFKEASEAYAVLSDAEKRRQYDQFGHAAFEGGAGGAGAGGFDFDFGDMGDIFGDLFGGMFGGGGSRRNSNGPRRGADVRVNVRITFDESVRGTTKKI 143          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP4 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 55/138 (39.86%), Postives = 71/138 (51.45%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFF------GGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YY++L V R A  E +K+AYR+LA KYHPD N+    A +RF EIN AYEVLSD ETR  YD +GE G+   AA             DIF S F      G G         +GDD+  +L     +   GG  ++
Sbjct:    3 RDYYDILGVSRDAGQEDLKQAYRRLARKYHPDVNK-EAGAEERFKEINRAYEVLSDPETRARYDRFGEAGVSGAAAGYGDMGDMG-GFADIFESIFSGFGGVGAGTSRRRTGPSRGDDLRFDLKLEFREAIFGGEKQI 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTR (Chaperone protein dnaJ OS=Chlamydia trachomatis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFG 534
            YY +L V + A+ E+IK+AYRKLA+KYHPDKN G+ EA +RF E++ AYEVL D++ R  YD YG++G    A           N++D   +F G
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDAEAERRFKEVSEAYEVLGDAQKRESYDRYGKDG--PFAGAGGFGGAGMGNMEDALRTFMG 95          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTB (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFG 534
            YY +L V + A+ E+IK+AYRKLA+KYHPDKN G+ EA +RF E++ AYEVL D++ R  YD YG++G    A           N++D   +F G
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDAEAERRFKEVSEAYEVLGDAQKRESYDRYGKDG--PFAGAGGFGGAGMGNMEDALRTFMG 95          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSP_TORCA5.280e-1858.90Cysteine string protein OS=Torpedo californica PE=... [more]
DNAJ_XANP26.896e-1835.25Chaperone protein dnaJ OS=Xanthobacter autotrophic... [more]
DNAJ_THENN6.896e-1837.84Chaperone protein dnaJ OS=Thermotoga neapolitana (... [more]
DNAJ_PSEU26.896e-1836.81Chaperone protein dnaJ OS=Pseudomonas syringae pv.... [more]
DNAJ_METPP6.896e-1835.17Chaperone protein dnaJ OS=Methylibium petroleiphil... [more]
DNAJ_HAMD56.896e-1835.82Chaperone protein dnaJ OS=Hamiltonella defensa sub... [more]
DNAJ_EUBE26.896e-1838.85Chaperone protein dnaJ OS=Eubacterium eligens (str... [more]
DNAJ_CYAP46.896e-1839.86Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_CHLTR6.896e-1846.32Chaperone protein dnaJ OS=Chlamydia trachomatis GN... [more]
DNAJ_CHLTB6.896e-1846.32Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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