CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPB (Chaperone protein dnaJ OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYEVL V R A + +IK+AY++LA+K+HPD+   ++ A ++F E   AYE+L+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSEDKNAEEKFKEAKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGFGGGGGGADFSDIFGDVFGDIFGGG--RRQQRASRGSDLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPA (Chaperone protein dnaJ OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYEVL V R A + +IK+AY++LA+K+HPD+   ++ A ++F E   AYE+L+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSEDKNAEEKFKEAKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGFGGGGGGADFSDIFGDVFGDIFGGG--RRQQRASRGSDLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_YERP3 (Chaperone protein dnaJ OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ------DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYEVL V R A + +IK+AY++LA+K+HPD+   ++ A ++F E   AYE+L+D++ R  YD YG    +Q                      D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRKSEDKNAEEKFKEAKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGFGGGGGGADFSDIFGDVFGDIFGGG--RRQQRASRGSDLRYNMDLTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_XYLFT (Chaperone protein dnaJ OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            + YY+VL VPR AS++ +K+AYR+ A+KYHPD+N G+  A   F E   AYEVL+D++ R +YDT+G     +H               DIF + FGG          +G DV   ++  LE+   G
Sbjct:    4 RDYYQVLGVPRTASEDDLKKAYRRCAMKYHPDRNPGDAAAEAAFKECKEAYEVLADTKKRKLYDTHGHAAF-EHGVGSGNTPDMNDIFGDIFGNIFGGARASR-----RGADVGYMVELDLEEAVAG 124          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_XYLFM (Chaperone protein dnaJ OS=Xylella fastidiosa (strain M12) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            + YY+VL VPR AS++ +K+AYR+ A+KYHPD+N G+  A   F E   AYEVL+D++ R +YDT+G     +H               DIF + FGG          +G DV   ++  LE+   G
Sbjct:    4 RDYYQVLGVPRTASEDDLKKAYRRCAMKYHPDRNPGDAAAEAAFKECKEAYEVLADTKKRKLYDTHGHAAF-EHGVGGGNAPDMNDIFGDIFGNIFGGARASR-----RGADVGYMVELDLEEAVAG 124          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_XYLFA (Chaperone protein dnaJ OS=Xylella fastidiosa GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            + YY+VL VPR AS++ +K+AYR+ A+KYHPD+N G+  A   F E   AYEVL+D++ R +YDT+G     +H               DIF + FGG          +G DV   ++  LE+   G
Sbjct:    4 RDYYQVLGVPRTASEDDLKKAYRRCAMKYHPDRNPGDAAAEAAFKECKEAYEVLADTKKRKLYDTHGHAAF-EHGVGGGNAPDMNDIFGDIFGNIFGGARASR-----RGADVGYMVELDLEEAVAG 124          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_XYLF2 (Chaperone protein dnaJ OS=Xylella fastidiosa (strain M23) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            + YY+VL VPR AS++ +K+AYR+ A+KYHPD+N G+  A   F E   AYEVL+D++ R +YDT+G     +H               DIF + FGG          +G DV   ++  LE+   G
Sbjct:    4 RDYYQVLGVPRTASEDDLKKAYRRCAMKYHPDRNPGDAAAEAAFKECKEAYEVLADTKKRKLYDTHGHAAF-EHGVGSGNTPDMNDIFGDIFGNIFGGARASR-----RGADVGYMVELDLEEAVAG 124          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_XANC5 (Chaperone protein dnaJ OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 51/129 (39.53%), Postives = 67/129 (51.94%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN--IQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            + YYEVL V RGASDE++K+AYR+ A+K+HPD+N G+  A   F E   AYEVLSD   R  YD +G    +             +     DIF + FGGG         +G DV   L+  LE+   G
Sbjct:    4 RDYYEVLGVARGASDEELKKAYRRCAMKHHPDRNPGDAAAEAAFKECKEAYEVLSDGNKRRAYDAHGHAAFEHGMGGGGGPGGPDMGDIFGDIFGNIFGGG-AAGPRAARRGADVGYVLELDLEEAVAG 131          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_XANAC (Chaperone protein dnaJ OS=Xanthomonas axonopodis pv. citri GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 51/129 (39.53%), Postives = 67/129 (51.94%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN--IQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            + YYEVL V RGASDE++K+AYR+ A+K+HPD+N G+  A   F E   AYEVLSD   R  YD +G    +             +     DIF + FGGG         +G DV   L+  LE+   G
Sbjct:    4 RDYYEVLGVARGASDEELKKAYRRCAMKHHPDRNPGDAAAEAAFKECKEAYEVLSDGNKRRAYDAHGHAAFEHGMGGGGGPGGPDMGDIFGDIFGNIFGGG-AAGPRAARRGADVGYVLELDLEEAVAG 131          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNP6 (Chaperone protein dnaJ OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 54/137 (39.42%), Postives = 73/137 (53.28%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGG-GPMEEDEKI------VKGDDVIVELDATLEDLYMGGSLKV 639
            YY++L V R A  ++IKRAYR+LA KYHPD N+    A  +F EIN AYEVLS+ ETR  YD +GE G+    A             DIF +FF G G M   +         +G+D+ ++L     D   GG  ++
Sbjct:    5 YYQLLGVARDADKDEIKRAYRRLARKYHPDVNK-EPGAEDKFKEINRAYEVLSEPETRARYDQFGEAGVSGAGAAGFQDFGDMGGFADIFETFFSGFGGMGGQQASARRRGPTRGEDLRLDLKLDFRDAIFGGEKEI 140          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_YERPB9.006e-1833.82Chaperone protein dnaJ OS=Yersinia pseudotuberculo... [more]
DNAJ_YERPA9.006e-1833.82Chaperone protein dnaJ OS=Yersinia pestis bv. Anti... [more]
DNAJ_YERP39.006e-1833.82Chaperone protein dnaJ OS=Yersinia pseudotuberculo... [more]
DNAJ_XYLFT9.006e-1837.80Chaperone protein dnaJ OS=Xylella fastidiosa (stra... [more]
DNAJ_XYLFM9.006e-1837.80Chaperone protein dnaJ OS=Xylella fastidiosa (stra... [more]
DNAJ_XYLFA9.006e-1837.80Chaperone protein dnaJ OS=Xylella fastidiosa GN=dn... [more]
DNAJ_XYLF29.006e-1837.80Chaperone protein dnaJ OS=Xylella fastidiosa (stra... [more]
DNAJ_XANC59.006e-1839.53Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_XANAC9.006e-1839.53Chaperone protein dnaJ OS=Xanthomonas axonopodis p... [more]
DNAJ_SYNP69.006e-1839.42Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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