CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOS7 (Chaperone protein dnaJ OS=Rhodopseudomonas sp. (strain No.7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ--HAAXXXXXXXXXVNIQDIFSSFFG-GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYE L+V R A D  +K A+RKLA+K+HPD+N G+ +   +F EIN AYEVL D + R  YD YG    +Q               +  DIF   FG            +G D+   ++ TLED + G + ++
Sbjct:    6 RCYYETLEVERNADDSTLKSAFRKLAMKWHPDRNPGDPQCEIKFKEINEAYEVLKDGDKRAAYDRYGHAAFEQGGFGGGAGFGAGFASSFSDIFEDLFGMAAQRGRGTGRERGADLRYNMEITLEDAFKGKTAQI 140          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOPT (Chaperone protein dnaJ OS=Rhodopseudomonas palustris (strain TIE-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ--HAAXXXXXXXXXVNIQDIFSSFFG-GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYE L+V R A D  +K A+RKLA+K+HPD+N G+ +   +F EIN AYEVL D + R  YD YG    +Q               +  DIF   FG            +G D+   ++ TLED + G + ++
Sbjct:    6 RCYYETLEVERNADDSTLKSAFRKLAMKWHPDRNPGDPQCEIKFKEINEAYEVLKDGDKRAAYDRYGHAAFEQGGFGGGAGFGAGFASSFSDIFEDLFGMAAQRGRGTGRERGADLRYNMEITLEDAFKGKTAQI 140          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOPA (Chaperone protein dnaJ OS=Rhodopseudomonas palustris GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ--HAAXXXXXXXXXVNIQDIFSSFFG-GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYE L+V R A D  +K A+RKLA+K+HPD+N G+ +   +F EIN AYEVL D + R  YD YG    +Q               +  DIF   FG            +G D+   ++ TLED + G + ++
Sbjct:    6 RCYYETLEVERNADDSTLKSAFRKLAMKWHPDRNPGDPQCEIKFKEINEAYEVLKDGDKRAAYDRYGHAAFEQGGFGGGAGFGAGFASSFSDIFEDLFGMAAQRGRGTGRERGADLRYNMEITLEDAFKGKTAQI 140          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_GLUOX (Chaperone protein dnaJ OS=Gluconobacter oxydans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 50/132 (37.88%), Postives = 74/132 (56.06%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYG----EEGLKQHAAXXXXXXXXXVNIQDIFSSFFG---GGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            YYE L+V R AS +++K+A+RK A++YHPD+N G++ A ++F EIN AY+VL D + R  YD YG    E G+                + DIF   FG   GG  +   +   G DV V+++ TL + + G
Sbjct:    7 YYESLEVSRTASQDELKKAFRKQAMRYHPDRNPGDDAAEQKFKEINEAYDVLKDEQKRAAYDRYGHDAFEGGMGGMGGGFGGGFAGAGGLGDIFDQMFGDMMGGRRDGGRR--TGADVQVQVEITLMEAFTG 136          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP8 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 8801) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 56/137 (40.88%), Postives = 69/137 (50.36%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGG-------GPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            YYE L V R AS E IKRAYR+LA KYHPD N+    A  RF EIN AYEVLS+ ETR  YD +GE G+    A             DIF + F G       G         +GDD+ ++L     +   GG  ++
Sbjct:    5 YYETLGVDRNASKEDIKRAYRRLARKYHPDINK-EAGAEDRFKEINRAYEVLSEPETRARYDQFGEAGVSGAGAAGFDYGDMG-GFADIFETIFSGFGGGVGTGSTRRRTGPTRGDDLRLDLKLDFREAIFGGEKEI 139          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP7 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 55/137 (40.15%), Postives = 74/137 (54.01%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGG-GPMEEDEKI------VKGDDVIVELDATLEDLYMGGSLKV 639
            YYE+L V R A+ ++IKRAYR+LA KYHPD N+    A +RF EIN AYE+LS+ ETR  YD +GE G+   A            I DIF + F G G M            V+GDD+ ++      +   GG  ++
Sbjct:    5 YYEILGVSRDANKDEIKRAYRRLARKYHPDVNK-EIGAEERFKEINRAYEILSEPETRARYDRFGEAGVSSGAGSGFEYGDMG-GIADIFETIFSGFGGMGTGTSSRRRTGPVRGDDLRLDFKLNFREAVFGGEKEI 139          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_BACWK (Chaperone protein dnaJ OS=Bacillus weihenstephanensis (strain KBAB4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 53/134 (39.55%), Postives = 74/134 (55.22%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFF--GGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYEVL + +GAS ++IK+AYR+LA KYHPD ++  E A ++F E+  AYEVLSD + R  YD +G  G  Q               +DIFSSFF  GGG   +     +G D+  ++    E+   G  L V
Sbjct:    4 RDYYEVLGLSQGASKDEIKKAYRRLAKKYHPDVSK-EENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGPNQ-GFGGGGDFGGGFGFEDIFSSFFGGGGGRRRDPNAPRQGADLQYQVTLEFEEAIFGKELNV 135          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_BACHK (Chaperone protein dnaJ OS=Bacillus thuringiensis subsp. konkukian GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 53/136 (38.97%), Postives = 74/136 (54.41%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ--HAAXXXXXXXXXVNIQDIFSSFF--GGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYEVL + +GAS ++IK+AYR+LA KYHPD ++  E A ++F E+  AYEVLSD + R  YD +G  G  Q                 +DIFSSFF  GGG   +     +G D+  ++    E+   G  L V
Sbjct:    4 RDYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSK-EENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGGGGRRRDPNAPRQGADLQYQVTLEFEEAIFGKELNV 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCZ (Chaperone protein dnaJ OS=Bacillus cereus (strain ZK / E33L) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 53/136 (38.97%), Postives = 74/136 (54.41%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ--HAAXXXXXXXXXVNIQDIFSSFF--GGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYEVL + +GAS ++IK+AYR+LA KYHPD ++  E A ++F E+  AYEVLSD + R  YD +G  G  Q                 +DIFSSFF  GGG   +     +G D+  ++    E+   G  L V
Sbjct:    4 RDYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSK-EENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGGGGRRRDPNAPRQGADLQYQVTLDFEEAIFGKELNV 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCR (Chaperone protein dnaJ OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 53/136 (38.97%), Postives = 74/136 (54.41%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ--HAAXXXXXXXXXVNIQDIFSSFF--GGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYEVL + +GAS ++IK+AYR+LA KYHPD ++  E A ++F E+  AYEVLSD + R  YD +G  G  Q                 +DIFSSFF  GGG   +     +G D+  ++    E+   G  L V
Sbjct:    4 RDYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSK-EENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGGGGRRRDPNAPRQGADLQYQVTLDFEEAIFGKELNV 138          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_RHOS71.536e-1735.56Chaperone protein dnaJ OS=Rhodopseudomonas sp. (st... [more]
DNAJ_RHOPT1.536e-1735.56Chaperone protein dnaJ OS=Rhodopseudomonas palustr... [more]
DNAJ_RHOPA1.536e-1735.56Chaperone protein dnaJ OS=Rhodopseudomonas palustr... [more]
DNAJ_GLUOX1.536e-1737.88Chaperone protein dnaJ OS=Gluconobacter oxydans GN... [more]
DNAJ_CYAP81.536e-1740.88Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_CYAP71.536e-1740.15Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_BACWK1.536e-1739.55Chaperone protein dnaJ OS=Bacillus weihenstephanen... [more]
DNAJ_BACHK1.536e-1738.97Chaperone protein dnaJ OS=Bacillus thuringiensis s... [more]
DNAJ_BACCZ1.536e-1738.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACCR1.536e-1738.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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