CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ1_THET8 (Chaperone protein dnaJ 1 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaJ1 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 53/133 (39.85%), Postives = 74/133 (55.64%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGG-GPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            K YY +L V R AS E+IK+AYR+LALKYHPD+N G++EA +RF EIN AY VLSD + R  YD    E  +                +D+F  FF     +    +  +G+D+  E++  L+DL  G   +V
Sbjct:    2 KDYYAILGVSREASQEEIKKAYRRLALKYHPDRNPGDKEAEERFKEINEAYAVLSDPKKRAAYDRGHLEAPEYRP-------------EDLFDLFFQEVFGVRGHRRPPRGEDLEAEVEVELQDLLHGAEKEV 121          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ1_SYNY3 (Chaperone protein dnaJ 1 OS=Synechocystis sp. (strain PCC 6803) GN=dnaJ1 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 54/139 (38.85%), Postives = 76/139 (54.68%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFG--GGPMEEDEK-------IVKGDDVIVELDATLEDLYMGGSLKV 639
            YY+ L V R A  ++IKRAYR+LA KYHPD N+    A ++F EIN AYEVLS+ E R  YD +GE G+    A          +  DIF + FG  GG M   ++         +GDD+ ++L  T ++   GG  ++
Sbjct:    5 YYQTLGVTRDADKDEIKRAYRRLARKYHPDVNK-EPGAEEKFKEINRAYEVLSEPEIRQRYDQFGEAGVSGGGAQGFDVGNMG-DFADIFETIFGGFGGGMGGQQRGRRRANGPTRGDDLRLDLQLTFQEAIFGGEKEI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: YR260_MIMIV (DnaJ-like protein R260 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R260 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 40/68 (58.82%), Postives = 53/68 (77.94%), Query Frame = 1
Query:  253 YEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL 456
            YE+L +   AS+E IK+AYRKLA+KYHPDKN+GN EA + F +IN+A  +LS+SE R +YD YGEE +
Sbjct:    9 YEILGLTPSASEEDIKKAYRKLAIKYHPDKNKGNPEAEEMFKKINHANSILSNSEKRRVYDQYGEEAV 76          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJC5_RAT (DnaJ homolog subfamily C member 5 OS=Rattus norvegicus GN=Dnajc5 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 1
Query:  238 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL 456
            +G+S Y VL + + A+ + IK++YRKLALKYHPDKN  N EA  +F EINNA+ +L+D+  RNIYD YG  GL
Sbjct:   12 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGL 84          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJC5_MOUSE (DnaJ homolog subfamily C member 5 OS=Mus musculus GN=Dnajc5 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 1
Query:  238 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL 456
            +G+S Y VL + + A+ + IK++YRKLALKYHPDKN  N EA  +F EINNA+ +L+D+  RNIYD YG  GL
Sbjct:   12 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGL 84          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJC5_HUMAN (DnaJ homolog subfamily C member 5 OS=Homo sapiens GN=DNAJC5 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 1
Query:  238 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL 456
            +G+S Y VL + + A+ + IK++YRKLALKYHPDKN  N EA  +F EINNA+ +L+D+  RNIYD YG  GL
Sbjct:   12 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGL 84          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJC5_BOVIN (DnaJ homolog subfamily C member 5 OS=Bos taurus GN=DNAJC5 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 1
Query:  238 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL 456
            +G+S Y VL + + A+ + IK++YRKLALKYHPDKN  N EA  +F EINNA+ +L+D+  RNIYD YG  GL
Sbjct:   12 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGL 84          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJB8_MOUSE (DnaJ homolog subfamily B member 8 OS=Mus musculus GN=Dnajb8 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 50/104 (48.08%), Postives = 64/104 (61.54%), Query Frame = 1
Query:  247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEE------GLKQHAAXXXXXXXXXVNIQDIFSSFFGG 537
            +YYEVL V   AS E IK+AYRKLAL++HPDKN  N EEA K+F +++ AYEVLSDS+ R++YD  G +      G     +          N +DIF  FFGG
Sbjct:    3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGGGANVPHSSPFGAGYPFRNPEDIFREFFGG 106          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_STRT2 (Chaperone protein dnaJ OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK----QHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            YY+ L + + AS ++IKRAYRKL+ KYHPD N+    A +++ EI  AYE LSD++ R  YD YG +G      Q +             +DIFSSFFGGG         +GDD+   ++ + E+   G   ++
Sbjct:    6 YYDRLGLSKDASQDEIKRAYRKLSKKYHPDINK-EPGAEEKYKEILEAYETLSDAQKRAAYDQYGPDGANGFGGQGSFGGFDGGAGFGGFEDIFSSFFGGGATRNPNAPRQGDDLQYRVNLSFEEAVFGAEKEI 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_STRT1 (Chaperone protein dnaJ OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK----QHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            YY+ L + + AS ++IKRAYRKL+ KYHPD N+    A +++ EI  AYE LSD++ R  YD YG +G      Q +             +DIFSSFFGGG         +GDD+   ++ + E+   G   ++
Sbjct:    6 YYDRLGLSKDASQDEIKRAYRKLSKKYHPDINK-EPGAEEKYKEILEAYETLSDAQKRAAYDQYGPDGANGFGGQGSFGGFDGGAGFGGFEDIFSSFFGGGATRNPNAPRQGDDLQYRVNLSFEEAVFGAEKEI 138          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ1_THET81.536e-1739.85Chaperone protein dnaJ 1 OS=Thermus thermophilus (... [more]
DNAJ1_SYNY31.536e-1738.85Chaperone protein dnaJ 1 OS=Synechocystis sp. (str... [more]
YR260_MIMIV2.006e-1758.82DnaJ-like protein R260 OS=Acanthamoeba polyphaga m... [more]
DNJC5_RAT2.006e-1756.16DnaJ homolog subfamily C member 5 OS=Rattus norveg... [more]
DNJC5_MOUSE2.006e-1756.16DnaJ homolog subfamily C member 5 OS=Mus musculus ... [more]
DNJC5_HUMAN2.006e-1756.16DnaJ homolog subfamily C member 5 OS=Homo sapiens ... [more]
DNJC5_BOVIN2.006e-1756.16DnaJ homolog subfamily C member 5 OS=Bos taurus GN... [more]
DNJB8_MOUSE2.006e-1748.08DnaJ homolog subfamily B member 8 OS=Mus musculus ... [more]
DNAJ_STRT22.006e-1737.31Chaperone protein dnaJ OS=Streptococcus thermophil... [more]
DNAJ_STRT12.006e-1737.31Chaperone protein dnaJ OS=Streptococcus thermophil... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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