CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJ5B_MOUSE (DnaJ homolog subfamily C member 5B OS=Mus musculus GN=Dnajc5b PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.422e-17
Identity = 40/73 (54.79%), Postives = 56/73 (76.71%), Query Frame = 1
Query:  238 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL 456
            +G+S YE+L + +GAS E+IK+ YRKLAL++HPDKN  +  A ++F EINNA+ +L+D+  RNIYD YG  GL
Sbjct:   16 SGESLYEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDTSKRNIYDKYGSLGL 88          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_THEM4 (Chaperone protein dnaJ OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.422e-17
Identity = 53/144 (36.81%), Postives = 81/144 (56.25%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEE-ANKRFAEINNAYEVLSDSETRNIYDTYGEEG-LKQHAAXXXXXXXXXVNI---------QDIFSSFFGGGPMEEDEKIV---KGDDVIVELDATLEDLYMG 624
            +A K YYE+L V R A+ E+I++AY+KL  K+HPD+N  N++ A ++F EI  AYEVLSD E R +YD +G  G +  +A           +I          DIF+ FFG       ++     KG+D+ + +D + E+L+ G
Sbjct:    1 MAKKDYYEILGVSRNATQEEIRQAYKKLIKKWHPDRNYENKKLAEEKFKEIQEAYEVLSDPEKRAMYDKFGYVGDVPPNAGGGFRGFGGFEDIFKDFGDFINNDIFNIFFGDQRTSSRKRTKTPRKGEDINISVDVSFEELFTG 144          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSS1 (Chaperone protein dnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.422e-17
Identity = 51/127 (40.16%), Postives = 69/127 (54.33%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            + YYEVL V R AS ++IK+A+R+LA +YHPD N+   +A  +F EIN AYEVLSD E R++YD +G  G    AA              IF +FFGG          +G D+   L  + E+   G
Sbjct:    5 RDYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKA-PDAEAKFKEINEAYEVLSDPEKRSMYDRFGHAG--PTAAPGFDPFSSADPFSSIFETFFGGTMRGSQRGPQRGADLRYTLSISFEEAVFG 128          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_METRJ (Chaperone protein dnaJ OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.422e-17
Identity = 49/139 (35.25%), Postives = 73/139 (52.52%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGG------------PMEEDEKIVKGDDVIVELDATLEDLYMG 624
            + YYE+L V + A++ ++K A+RKLA+ YHPD+N G+++A  +F EIN AY+ LSD + R  YD +G     Q              + DIF +FFG G            P  E     +G D+   L+ TLE+ + G
Sbjct:    4 RDYYEILGVTKTATEGEMKVAFRKLAMTYHPDRNPGDKDAEIKFKEINEAYQCLSDGQKRAAYDRFGHAAFSQGGGGPGFGNEFGDFMSDIFDNFFGDGRGGGGARGRGGTPGRE-----RGADLRYNLEITLEEAFTG 137          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_BACTR (Chaperone protein dnaJ OS=Bacillus thermoglucosidasius GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.422e-17
Identity = 55/157 (35.03%), Postives = 76/157 (48.41%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA------XXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKML*ASPRQRRCN 687
            +A + YYE+L V + A+ E+IK+AYRKL+ KYHPD N+   +A ++F EI  AYEVLSD + R  YD +G     Q                      DIFS+FFGGG   +      G D+   +  T E+   G    +         PR+  CN
Sbjct:    1 MAKRDYYEILGVSKNATKEEIKKAYRKLSKKYHPDINK-EPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGHADPNQGFGGFRSDDFDFGGFSGFSGFDDIFSTFFGGGRRRDPNAPRAGADLQYTMTLTFEEAVFGKETDI-------EIPREETCN 149          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ZYMMO (Chaperone protein dnaJ OS=Zymomonas mobilis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 46/135 (34.07%), Postives = 74/135 (54.81%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA--AXXXXXXXXXVNIQDIFSSFFG---GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            YY +L+V R A D+ IK +YR+LA++YHPD+N G+ +A +RF  I+ AY+ L D + R  YD YG++  +                   DIF S FG   GG  +    + +G D+  +L  +LE+ + G ++ +
Sbjct:    6 YYSLLEVERTADDKTIKTSYRRLAMRYHPDRNPGDSDAEERFKAISEAYDCLKDPQKRAAYDRYGKDAFQGGGGFGGFGGGAQDFGGFSDIFESVFGEFMGGRGQARSSVQRGADLRYDLKISLEEAFKGKTVDI 140          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBVY (Chaperone protein dnaJ OS=Vibrio vulnificus (strain YJ016) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 47/138 (34.06%), Postives = 74/138 (53.62%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN-----IQDIFSSFFGGGPMEEDE-KIVKGDDVIVELDATLEDLYMGGSLKV 639
            + +YEVL V R AS+  IK+AY++LA+K+HPD+NQG+E A  +F E+  AYE+L+D + +  YD YG    +Q                     D+F   FGGG       +  +G D+   ++ +LE+   G S ++
Sbjct:    4 RDFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEILTDPQKKAAYDQYGHAAFEQGGGGFGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGHARPQRGADLRYNMELSLEEAVRGVSKEI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBVU (Chaperone protein dnaJ OS=Vibrio vulnificus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 47/138 (34.06%), Postives = 74/138 (53.62%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN-----IQDIFSSFFGGGPMEEDE-KIVKGDDVIVELDATLEDLYMGGSLKV 639
            + +YEVL V R AS+  IK+AY++LA+K+HPD+NQG+E A  +F E+  AYE+L+D + +  YD YG    +Q                     D+F   FGGG       +  +G D+   ++ +LE+   G S ++
Sbjct:    4 RDFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEILTDPQKKAAYDQYGHAAFEQGGGGFGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGHARPQRGADLRYNMELSLEEAVRGVSKEI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_THEEB (Chaperone protein dnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 51/136 (37.50%), Postives = 72/136 (52.94%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK--QHAAXXXXXXXXXVNIQDIFSSFFGG--GPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + +YE+L V R A  E++KRAYR+LA KYHPD N+    A ++F EIN AYEVLSD + R  YD +GE G+     A              DIF +FFGG        +   +G+D+  +L     +   GG  ++
Sbjct:    3 RDFYEILGVSRSADAEELKRAYRRLARKYHPDVNK-EPGAEEKFKEINRAYEVLSDPQARANYDRFGEAGVSGVGAAGFSDFGIGDMGGFADIFETFFGGFTTSSRRQQGPTRGEDLRYDLKLEFREAVFGGEKEI 137          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_STRA1 (Chaperone protein dnaJ OS=Streptococcus agalactiae serotype Ia GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 47/130 (36.15%), Postives = 72/130 (55.38%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +Y+ L V + AS ++IK+AYR+++ KYHPD N+    A +++ E+  AYE LSD++ R  YD YG  G   +              +DIFSSFFGGG M       +GDD+   ++ + E+   G   +V
Sbjct:    6 FYDRLGVSKDASQDEIKKAYRRMSKKYHPDINK-EAGAEEKYKEVQEAYETLSDTQKRAAYDQYGAAG--ANGGFGGFDGGGFGGFEDIFSSFFGGGGMRNPNAPRQGDDLQYRVNLSFEEAIFGAEKEV 132          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJ5B_MOUSE3.422e-1754.79DnaJ homolog subfamily C member 5B OS=Mus musculus... [more]
DNAJ_THEM43.422e-1736.81Chaperone protein dnaJ OS=Thermosipho melanesiensi... [more]
DNAJ_ROSS13.422e-1740.16Chaperone protein dnaJ OS=Roseiflexus sp. (strain ... [more]
DNAJ_METRJ3.422e-1735.25Chaperone protein dnaJ OS=Methylobacterium radioto... [more]
DNAJ_BACTR3.422e-1735.03Chaperone protein dnaJ OS=Bacillus thermoglucosida... [more]
DNAJ_ZYMMO4.470e-1734.07Chaperone protein dnaJ OS=Zymomonas mobilis GN=dna... [more]
DNAJ_VIBVY4.470e-1734.06Chaperone protein dnaJ OS=Vibrio vulnificus (strai... [more]
DNAJ_VIBVU4.470e-1734.06Chaperone protein dnaJ OS=Vibrio vulnificus GN=dna... [more]
DNAJ_THEEB4.470e-1737.50Chaperone protein dnaJ OS=Thermosynechococcus elon... [more]
DNAJ_STRA14.470e-1736.15Chaperone protein dnaJ OS=Streptococcus agalactiae... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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