CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21
Identity = 57/131 (43.51%), Postives = 77/131 (58.78%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIV-KGDDVIVELDATLEDLYMG 624
            +A + YYEVL V + AS ++IK+AYRKL+ KYHPD N+  E A+++F EI+ AYEVLSD   R  YD +G +G +                +DIFSSFFGGG  + D     KGDD+   +  T E+   G
Sbjct:    1 MAKRDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDENKRANYDQFGHDGPQGGFGSQGFGGSDFGGFEDIFSSFFGGGSRQRDPNAPRKGDDLQYTMTITFEEAVFG 130          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEPW (Chaperone protein dnaJ OS=Pseudomonas putida (strain W619) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21
Identity = 55/136 (40.44%), Postives = 77/136 (56.62%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYEVL V RGAS+  +K+AYR+LA+KYHPD+N G++E+  +F E N AYEVLSD+  R  +D YG  G+   +           N  DI    FS FFGGG         +G D+   L+  LE+   G ++ +
Sbjct:    4 RDYYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYGHAGV-DPSMGGGGAGFGGANFSDIFGDVFSDFFGGGRGGGRGGAARGSDLRYTLELNLEEAVRGTTVSI 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 59/146 (40.41%), Postives = 83/146 (56.85%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGG-------PMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            +A    Y++L VP GAS+ ++K+AYRKLA +YHPDK   N  A  +F EI+ AYEVLS+ E R +YD YGE+GL++ +            + DIFS  FGGG                +G+D++  L  +LEDLY G + K+   K
Sbjct:    4 VADTKLYDILGVPPGASENELKKAYRKLAKEYHPDK---NPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGG-------GMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSK 139          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 59/146 (40.41%), Postives = 83/146 (56.85%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGG-------PMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            +A    Y++L VP GAS+ ++K+AYRKLA +YHPDK   N  A  +F EI+ AYEVLS+ E R +YD YGE+GL++ +            + DIFS  FGGG                +G+D++  L  +LEDLY G + K+   K
Sbjct:    4 VADTKLYDILGVPPGASENELKKAYRKLAKEYHPDK---NPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGG-------GMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSK 139          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 59/146 (40.41%), Postives = 83/146 (56.85%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGG-------PMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            +A    Y++L VP GAS+ ++K+AYRKLA +YHPDK   N  A  +F EI+ AYEVLS+ E R +YD YGE+GL++ +            + DIFS  FGGG                +G+D++  L  +LEDLY G + K+   K
Sbjct:    4 VADTKLYDILGVPPGASENELKKAYRKLAKEYHPDK---NPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGG-------GMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSK 139          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 59/146 (40.41%), Postives = 83/146 (56.85%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGG-------PMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            +A    Y++L VP GAS+ ++K+AYRKLA +YHPDK   N  A  +F EI+ AYEVLS+ E R +YD YGE+GL++ +            + DIFS  FGGG                +G+D++  L  +LEDLY G + K+   K
Sbjct:    4 VADTKLYDILGVPPGASENELKKAYRKLAKEYHPDK---NPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGG-------GMDDIFSHIFGGGLFSFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSK 139          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLSU (Chaperone protein dnaJ OS=Wolinella succinogenes GN=dnaJ PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQD---IFSSFFGGGPMEEDEKIVKGD---DVIVELDATLEDLYMG 624
            YYE+L++ R AS E+IK+AYRK+A+KYHPD+N+G+ EA + F  +N AY+VLSD   R +YD YG++GL+                 D   IF S FGGG      K        D+ +ELD + ++   G
Sbjct:    6 YYEILEIERSASGEEIKKAYRKMAMKYHPDRNEGSSEAEEMFKRVNEAYQVLSDEGKRQLYDRYGKQGLESQGYSGFSGRGFEDVFDDLGSIFDSVFGGGFSSSSRKRSGPKYNLDLAMELDLSFKEAIFG 136          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_STAEQ (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 57/131 (43.51%), Postives = 77/131 (58.78%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIV-KGDDVIVELDATLEDLYMG 624
            +A + YYEVL V + AS ++IK+AYRKL+ KYHPD N+  E A+++F EI+ AYEVLSD   R  YD +G +G +                +DIFSSFFGGG  + D     KGDD+   +  T E+   G
Sbjct:    1 MAKRDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDENKRVNYDQFGHDGPQGGFGSQGFGGSDFGGFEDIFSSFFGGGSRQRDPNAPRKGDDLQYTMTITFEEAVFG 130          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_BORA1 (Chaperone protein dnaJ OS=Bordetella avium (strain 197N) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN-IQDIFSSFF-------GGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYEVL V + A+D+++K+AYRKLA+KYHPD+N GN+EA ++F E   AYEVL D + R  YD YG  G+  ++A          +   DIF   F       GGGP     ++ +G D+   L+ TLE    G
Sbjct:    1 MAKRDYYEVLGVAKDAADDELKKAYRKLAMKYHPDRNPGNKEAEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNSAGGAGMGGGFADAFGDIFGEIFGAGRRGGGGGP-----QVYRGADLKYALEITLEQAANG 133          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 60/135 (44.44%), Postives = 75/135 (55.56%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPM-----EEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            YYE+L V + AS + +K+AYRK A+K HPDK    E    +F E+  AYEVLSD E R IYD YGE+ LK+                DIF SFFGG P          +  +G+DVI  L  +LEDLY G S K+
Sbjct:   13 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGHDPF-----DIFQSFFGGSPFGGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKL 138          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_STAES2.290e-2143.51Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]
DNAJ_PSEPW2.290e-2140.44Chaperone protein dnaJ OS=Pseudomonas putida (stra... [more]
DNJA2_RAT2.991e-2140.41DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE2.991e-2140.41DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_HUMAN2.991e-2140.41DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN2.991e-2140.41DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNAJ_WOLSU2.991e-2140.46Chaperone protein dnaJ OS=Wolinella succinogenes G... [more]
DNAJ_STAEQ2.991e-2143.51Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]
DNAJ_BORA12.991e-2140.58Chaperone protein dnaJ OS=Bordetella avium (strain... [more]
DNJH_CUCSA3.907e-2144.44DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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