CX296553

Overview
NameCX296553
Unique NameCX296553
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length327
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_BACHK (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis subsp. konkukian GN=menE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 3
Query:  102 GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPL 326
            GEIV++G  V  GY     A  E   NGW H+GDL     + ++ + DR  D+IISGGENI   ++E+VL  HP+
Sbjct:  332 GEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPM 406          
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_BACCZ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ZK / E33L) GN=menE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 3
Query:  102 GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPL 326
            GEIV++G  V  GY     A  E   NGW H+GDL     + ++ + DR  D+IISGGENI   ++E+VL  HP+
Sbjct:  332 GEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPM 406          
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_BACCQ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain Q1) GN=menE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13
Identity = 34/76 (44.74%), Postives = 45/76 (59.21%), Query Frame = 3
Query:   96 TIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHP 323
            T GEIV++G  V  GY     A  E   NGW H+GDL     + ++ + DR  D+IISGGENI   ++E+VL  HP
Sbjct:  329 TEGEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHP 404          
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_BACC7 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH187) GN=menE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13
Identity = 34/76 (44.74%), Postives = 45/76 (59.21%), Query Frame = 3
Query:   96 TIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHP 323
            T GEIV++G  V  GY     A  E   NGW H+GDL     + ++ + DR  D+IISGGENI   ++E+VL  HP
Sbjct:  329 TEGEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHP 404          
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_BACC0 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH820) GN=menE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 3
Query:  102 GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPL 326
            GEIV++G  V  GY     A  E   NGW H+GDL     + ++ + DR  D+IISGGENI   ++E+VL  HP+
Sbjct:  332 GEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPM 406          
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_BACAN (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis GN=menE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 3
Query:  102 GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPL 326
            GEIV++G  V  GY     A  E   NGW H+GDL     + ++ + DR  D+IISGGENI   ++E+VL  HP+
Sbjct:  331 GEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPM 405          
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_BACAH (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis (strain Al Hakam) GN=menE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 3
Query:  102 GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPL 326
            GEIV++G  V  GY     A  E   NGW H+GDL     + ++ + DR  D+IISGGENI   ++E+VL  HP+
Sbjct:  332 GEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPM 406          
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_BACAC (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=menE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 3
Query:  102 GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPL 326
            GEIV++G  V  GY     A  E   NGW H+GDL     + ++ + DR  D+IISGGENI   ++E+VL  HP+
Sbjct:  332 GEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPM 406          
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_BACAA (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain A0248) GN=menE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 3
Query:  102 GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPL 326
            GEIV++G  V  GY     A  E   NGW H+GDL     + ++ + DR  D+IISGGENI   ++E+VL  HP+
Sbjct:  332 GEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPM 406          
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_BACCR (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=menE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.086e-13
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 3
Query:  102 GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHP 323
            GEIV++G  V  GY     A  E   NGW H+GDL     + ++ + DR  D+IISGGENI   ++E+VL  HP
Sbjct:  332 GEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHP 405          
The following BLAST results are available for this feature:
BLAST of CX296553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
MENE_BACHK4.740e-1344.002-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]
MENE_BACCZ4.740e-1344.002-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCQ4.740e-1344.742-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACC74.740e-1344.742-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACC04.740e-1344.002-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACAN4.740e-1344.002-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAH4.740e-1344.002-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]
MENE_BACAC4.740e-1344.002-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAA4.740e-1344.002-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACCR8.086e-1344.592-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]

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Properties
Property NameValue
Genbank descriptionC05146A09SK FerrChloL1 Citrus clementina cDNA clone C05146A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296553 ID=CX296553; Name=CX296553; organism=Citrus clementina; type=EST; length=327bp
GAGGTCATGCCCGTCAAGGGGTCAGGACTATTTGCCTGGATGGCTTAGAT
GTTATCGACGCGAGAACAAACCAACCGGTTCCTGCTGATGGGAAAACAAT
TGGAGAGATAGTGATGCGTGGCAGTTGTGTGATGAAGGGTTACCTAAAGA
ACCCTAAAGCCAACGAGGAAGCTTTTGCAAACGGGTGGTTTCATTCTGGG
GATCTTGCTGTGAAGCATCCGGATAATTATATCGAAATTAAAGACAGATT
AAAGGATGTAATTATCTCTGGAGGTGAAAATATTAGCAGTGTTGAAGTAG
AGAAAGTGCTGTACTTGCATCCATTAG
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