CX296553
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_BACC1 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 10987) GN=menE PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.086e-13 Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = 3 Query: 96 TIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHP 323 T GEIV++G V GY A E NGW H+GD+ + ++ + DR D+IISGGENI ++E+VL HP Sbjct: 329 TEGEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHP 404
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_LISMO (2-succinylbenzoate--CoA ligase OS=Listeria monocytogenes GN=menE PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.056e-12 Identity = 36/93 (38.71%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 39 DGLDVIDARTNQPVPADGKTI--GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVL 311 D L+ I + PA+ K GEI+++G + GYL N KA E +F +GWF +GD+ + ++ + +R D+IISGGENI E+E V+ Sbjct: 295 DALNKIGSSGKALFPAEVKIADDGEILLKGPSITPGYLHNKKATEASFVDGWFKTGDIGYLDEEGFLFVVERRSDLIISGGENIYPTEIEHVI 387
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_LISMF (2-succinylbenzoate--CoA ligase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=menE PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.056e-12 Identity = 36/93 (38.71%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 39 DGLDVIDARTNQPVPADGKTI--GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVL 311 D L+ I + PA+ K GEI+++G + GYL N KA E +F +GWF +GD+ + ++ + +R D+IISGGENI E+E V+ Sbjct: 295 DALNKIGSSGKALFPAEVKIADDGEILLKGPSITPGYLHNKKATEASFVDGWFKTGDIGYLDEEGFLFVLERRSDLIISGGENIYPTEIEHVI 387
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: LCFA_ECO57 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7 GN=fadD PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.379e-12 Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 3 Query: 102 GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHP 323 GE+ +RG VM GY + P A +E NGW H+GD+AV + ++ I DR KD+I+ G N+ E+E V+ HP Sbjct: 405 GELCVRGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHP 478
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: MENE_LISIN (2-succinylbenzoate--CoA ligase OS=Listeria innocua GN=menE PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.801e-12 Identity = 36/93 (38.71%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 39 DGLDVIDARTNQPVPADGKTI--GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVL 311 D L+ I + PA+ K GEI+++G + GYL N KA +AF +GWF +GD+ + ++ + +R D+IISGGENI E+E V+ Sbjct: 295 DALNKIGSSGKALFPAEVKIADDGEILLKGPSITPGYLHNEKATAKAFIDGWFKTGDIGYLDEEGFLFVLERRSDLIISGGENIYPTEIEHVI 387
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: LCFA_ECOLI (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadD PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.073e-12 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 3 Query: 102 GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHP 323 GE+ ++G VM GY + P A +E NGW H+GD+AV + ++ I DR KD+I+ G N+ E+E V+ HP Sbjct: 405 GELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHP 478
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: LCFA_ECOL6 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O6 GN=fadD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.073e-12 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 3 Query: 102 GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHP 323 GE+ ++G VM GY + P A +E NGW H+GD+AV + ++ I DR KD+I+ G N+ E+E V+ HP Sbjct: 405 GELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHP 478
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: LCFA_SALTY (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhimurium GN=fadD PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.241e-12 Identity = 33/90 (36.67%), Postives = 52/90 (57.78%), Query Frame = 3 Query: 51 VIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLH 320 ++D N+ P + GE+ ++G VM GY + P A +E +GW H+GD+AV D ++ I DR KD+I+ G N+ E+E V+ H Sbjct: 391 LVDDDDNEVAPGEA---GELCVKGPQVMLGYWQRPDATDEIIKDGWLHTGDIAVMDEDGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQH 477
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: LCFA_SALTI (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhi GN=fadD PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.241e-12 Identity = 33/90 (36.67%), Postives = 52/90 (57.78%), Query Frame = 3 Query: 51 VIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLH 320 ++D N+ P + GE+ ++G VM GY + P A +E +GW H+GD+AV D ++ I DR KD+I+ G N+ E+E V+ H Sbjct: 391 LVDDDDNEVAPGEA---GELCVKGPQVMLGYWQRPDATDEIIKDGWLHTGDIAVMDEDGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQH 477
BLAST of CX296553 vs. ExPASy Swiss-Prot
Match: FADK_ECOLI (Short-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadK PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 5.241e-12 Identity = 44/108 (40.74%), Postives = 54/108 (50.00%), Query Frame = 3 Query: 3 GHARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHP 323 G+A GV +D DAR P +G E RG V GY P+ A GW++SGDL YI+I R KD+I+ GGENISS EVE +L HP Sbjct: 359 GYAAAGVEIKVVD-----DARKTLPPGCEG----EEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHP 457 The following BLAST results are available for this feature:
BLAST of CX296553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296553 ID=CX296553; Name=CX296553; organism=Citrus clementina; type=EST; length=327bpback to top |