CX296561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_CHLAA (Methylthioribose-1-phosphate isomerase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=mtnA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.308e-26 Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 + ETRPF QG+RLTA+EL+ IP +M+ G++ VIVGADR+AANGD NKIGTY LA+ A++HNI FYVAAP ++IDL +SG +I IEER E+ Sbjct: 187 FVDETRPFLQGARLTAWELLQAGIPQTLITDNMAAFMMQRGQIDCVIVGADRIAANGDVANKIGTYGLAVLARYHNIPFYVAAPSSTIDLATASGADIPIEERDPAEV 294
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_ALHEH (Methylthioribose-1-phosphate isomerase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mtnA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.308e-26 Identity = 63/109 (57.80%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL 332 Y ETRP+ QG+RLTA+ELV D IP LM+ GRV VIVGADRVAANGDT NKIGTY+LAL K H + F V AP ++IDL G I IEER +ELL Sbjct: 187 YADETRPWLQGARLTAWELVADGIPVRLIAEGAAPLLMQRGRVDWVIVGADRVAANGDTANKIGTYALALACKAHGVKFMVVAPSSTIDLDCPGGDRIPIEERPPEELL 295
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_THEEB (Methylthioribose-1-phosphate isomerase OS=Thermosynechococcus elongatus (strain BP-1) GN=mtnA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.238e-26 Identity = 58/108 (53.70%), Postives = 76/108 (70.37%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 Y ETRP QG++LTA+E V + IP M+ G + AV+VGADR+A NGDT NKIGTYS+AL AK HNI F+VAAPL++ID ++++G EI IEER +E+ Sbjct: 196 YADETRPRLQGAKLTAWECVQEGIPVTLIADTMAAHCMQRGMIDAVVVGADRIALNGDTANKIGTYSVALAAKAHNIPFFVAAPLSTIDTSIATGAEIPIEERHPQEI 303
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_RHOFD (Methylthioribose-1-phosphate isomerase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mtnA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.076e-25 Identity = 58/105 (55.24%), Postives = 73/105 (69.52%), Query Frame = 3 Query: 15 ETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 ETRPF QG+RLTA+E+V + IP LM G V A++VG DRVAANGD NKIGTY +A+ A+ HNI FYVA PL++IDL + G I IEER+A+E+ Sbjct: 198 ETRPFLQGARLTAWEMVQENIPVTLITDNMAGHLMSRGEVDAIVVGTDRVAANGDVANKIGTYMVAVLAQRHNIPFYVACPLSTIDLAIPDGAAIPIEERAAEEV 302
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_CARHZ (Methylthioribose-1-phosphate isomerase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=mtnA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.076e-25 Identity = 61/108 (56.48%), Postives = 73/108 (67.59%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 + ETRP QG+RLTAFEL+ D I +M G V V+VGADRV ANGD NKIGTYSLA+ AK H I FYVAAP ++IDL L+SGQ+I IEER+ E+ Sbjct: 183 FADETRPLLQGARLTAFELLEDGIDVTLICDNMAGYVMSLGLVDLVVVGADRVTANGDVANKIGTYSLAILAKEHGIPFYVAAPYSTIDLNLTSGQDIPIEERNPDEV 290
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_PERMH (Methylthioribose-1-phosphate isomerase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=mtnA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.405e-25 Identity = 59/108 (54.63%), Postives = 73/108 (67.59%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 Y ETRP+ QGSRLTA+ELV + IP LM G + A+IVGADR+ ANGD NKIGTY+LA+ A+ H I FYVAAP ++ DL SG++I IEERS E+ Sbjct: 191 YVDETRPYLQGSRLTAWELVEEGIPHYLITDNSAGFLMSKGIIDAIIVGADRITANGDVANKIGTYTLAVLAEAHGIPFYVAAPTSTFDLDTDSGKDIPIEERSQLEV 298
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_NOSP7 (Methylthioribose-1-phosphate isomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=mtnA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.405e-25 Identity = 57/108 (52.78%), Postives = 74/108 (68.52%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 + ETRP QG++LTA+E V + IP MK G + AV+VGADR+AANGDT NKIGTYS+A+ AK HNI F+VAAPL+++D L+ G +I IEER E+ Sbjct: 194 FADETRPRLQGAKLTAWECVQEGIPVTLITDNMAAHCMKQGLIHAVVVGADRIAANGDTANKIGTYSVAIAAKAHNIPFFVAAPLSTVDFELADGSKIPIEERDPTEI 301
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_GEOBB (Methylthioribose-1-phosphate isomerase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=mtnA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.405e-25 Identity = 57/108 (52.78%), Postives = 79/108 (73.15%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 + ETRP+ QG+RLTA+EL+ D IP LMK G++ +VGADR+AANGDT NKIGTYS+A+ AK + I FYVAAP++++DL L++G I IEER+++E+ Sbjct: 187 FADETRPWLQGARLTAWELMKDSIPVTLISDNMAGWLMKTGQIDFCVVGADRIAANGDTANKIGTYSVAVLAKENRIPFYVAAPISTLDLKLANGDLIPIEERASEEV 294
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_GLOVI (Methylthioribose-1-phosphate isomerase OS=Gloeobacter violaceus GN=mtnA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.835e-25 Identity = 56/108 (51.85%), Postives = 78/108 (72.22%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 Y ETRP QG+RLTA+ELVH+RIP ++ G V AV+VGADR+AANGDT NKIGT +A+ A+ + + F+VAAP +++DL LSSG++I IE+R ++E+ Sbjct: 188 YADETRPRLQGARLTAWELVHERIPVTVLADTMAAHVIGRGLVDAVVVGADRIAANGDTANKIGTCGVAIIARHYGVPFFVAAPWSTVDLNLSSGEQIPIEQRDSEEM 295
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_GEOUR (Methylthioribose-1-phosphate isomerase OS=Geobacter uraniireducens (strain Rf4) GN=mtnA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.835e-25 Identity = 55/108 (50.93%), Postives = 78/108 (72.22%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 + ETRP+ QG+RLT++EL+ D IP M+ G + +VGADR+AANGDT NKIGTYS+A+ AK + I FYVAAP++++DL+L SG++I IEER ++E+ Sbjct: 187 FADETRPWLQGARLTSWELMKDGIPVTLISDNMAGYFMRKGEIDVCVVGADRIAANGDTANKIGTYSVAVLAKENKIPFYVAAPVSTLDLSLKSGEDIPIEERHSREV 294 The following BLAST results are available for this feature:
BLAST of CX296561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296561 ID=CX296561; Name=CX296561; organism=Citrus clementina; type=EST; length=335bpback to top |