CX296561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_THETN (Methylthioribose-1-phosphate isomerase OS=Thermoanaerobacter tengcongensis GN=mtnA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.397e-25 Identity = 54/108 (50.00%), Postives = 76/108 (70.37%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 Y ETRP QG++LTA+ELV + IP L++DG++ ++VGADR+A NGDT NKIGT+ L++ AK +N+ FYV AP ++ID + +G EIVIEERS +E+ Sbjct: 188 YADETRPRLQGAKLTAWELVQEGIPAKLIADSVAATLIRDGKIDIILVGADRIALNGDTANKIGTFMLSVVAKVYNVPFYVVAPTSTIDFNIETGAEIVIEERSPEEV 295
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_THISH (Methylthioribose-1-phosphate isomerase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=mtnA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.131e-25 Identity = 58/109 (53.21%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL 332 Y ETRP+ QG+RLTA+ELV D IP LM+ GRV V+VGADR+AANGDT NKIGTY+LA+ A+ H + F V AP ++ID+ G I IEER E+L Sbjct: 190 YADETRPWLQGARLTAWELVQDGIPVDLICEGAAASLMRSGRVGWVVVGADRIAANGDTANKIGTYALAVLARHHGVRFMVVAPTSTIDMDTPDGAGIPIEERPVSEVL 298
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_GEOSM (Methylthioribose-1-phosphate isomerase OS=Geobacter sp. (strain M21) GN=mtnA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.131e-25 Identity = 56/108 (51.85%), Postives = 79/108 (73.15%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 + ETRP+ QG+RLTA+EL+ D IP LM+ G++ +VGADR+AANGDT NKIGTYS+A+ AK + I FYVAAP++++DL L++G I IEER+++E+ Sbjct: 187 FADETRPWLQGARLTAWELMKDSIPVTLISDNMAGWLMRTGQIDFCVVGADRIAANGDTANKIGTYSVAVLAKENRIPFYVAAPISTLDLKLANGDLIPIEERASEEV 294
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_PSEU5 (Methylthioribose-1-phosphate isomerase OS=Pseudomonas stutzeri (strain A1501) GN=mtnA PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 4.089e-25 Identity = 58/109 (53.21%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL 332 Y ETRP+ QGSRLTA+EL+ D +P LMK +S VIVGADR+ ANGD NKIGTY LA+ A H + F V AP ++ID+ L SG EI++EER+ ELL Sbjct: 196 YVDETRPWLQGSRLTAWELLGDGVPATLNVDSAAAHLMKSRGISWVIVGADRITANGDVANKIGTYQLAVLAMHHGVRFMVVAPSSTIDMALESGDEILLEERAGSELL 304
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_DESVM (Methylthioribose-1-phosphate isomerase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=mtnA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.089e-25 Identity = 57/106 (53.77%), Postives = 72/106 (67.92%), Query Frame = 3 Query: 12 SETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 +ETRPF QG+RLTA+EL D IP LM+ G V V+VGADR+AANGD NKIGTYS+AL A+ H + FYVAAPL++ID G I IE+R+ +E+ Sbjct: 189 NETRPFLQGARLTAYELHEDHIPVTVACDNACGHLMRKGMVQKVVVGADRIAANGDAANKIGTYSVALLAREHGVPFYVAAPLSTIDRNTPDGDHIPIEDRTPREV 294
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_HELMI (Methylthioribose-1-phosphate isomerase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=mtnA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.340e-25 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 + ETRP QG+RLTA+EL+ D IP +MK V VIVGADR+ ANGD NKIGTY +AL AK H I FYVAAP+++ DL+L SG +I IEER +E+ Sbjct: 185 FADETRPLLQGARLTAWELMQDGIPVTLITDSMAAYVMKQKLVDLVIVGADRITANGDVANKIGTYGVALAAKAHGIPFYVAAPVSTFDLSLESGLQIPIEERDTEEV 292
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_CHLTE (Methylthioribose-1-phosphate isomerase OS=Chlorobium tepidum GN=mtnA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.340e-25 Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 3 Query: 12 SETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 SE+RP QG RLTA+EL HD IP LM+ G + I GADR+ ANGDT NKIGTY+ A+ A++H + FY+AAP+++ID+T++ G EI IEER+ EL Sbjct: 197 SESRPLLQGLRLTAWELEHDGIPFASISDSSSAILMQRGMIDFAITGADRITANGDTANKIGTYAHAISARYHGLPFYIAAPVSTIDITMAEGSEIPIEERNPDEL 302
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_DESVV (Methylthioribose-1-phosphate isomerase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=mtnA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.974e-25 Identity = 60/106 (56.60%), Postives = 70/106 (66.04%), Query Frame = 3 Query: 12 SETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 +ETRPF QG+RLTAFEL D IP LMK G V V+VGADR+AANGD NKIGTYS+AL A+ H I FYVAAPL++ID G I IE R+ E+ Sbjct: 190 NETRPFLQGARLTAFELHEDGIPVTVACDNACGLLMKRGMVQKVVVGADRIAANGDAANKIGTYSVALLAREHGIPFYVAAPLSTIDRETPDGDHIPIENRTPTEV 295
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_DESVH (Methylthioribose-1-phosphate isomerase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=mtnA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.974e-25 Identity = 60/106 (56.60%), Postives = 70/106 (66.04%), Query Frame = 3 Query: 12 SETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 +ETRPF QG+RLTAFEL D IP LMK G V V+VGADR+AANGD NKIGTYS+AL A+ H I FYVAAPL++ID G I IE R+ E+ Sbjct: 190 NETRPFLQGARLTAFELHEDGIPVTVACDNACGLLMKRGMVQKVVVGADRIAANGDAANKIGTYSVALLAREHGIPFYVAAPLSTIDRETPDGDHIPIENRTPTEV 295
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_ANADF (Methylthioribose-1-phosphate isomerase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=mtnA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.974e-25 Identity = 55/109 (50.46%), Postives = 73/109 (66.97%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL 332 + ETRPF QG+RLTA+EL D IP LM G ++ V+VGADR+AANGD NKIGTY+LA+ A +H++ FYVAAP +++DL G I IEER +E++ Sbjct: 178 FADETRPFLQGARLTAWELKRDGIPVTLLTDNMAGWLMAQGEIACVVVGADRIAANGDVANKIGTYALAVLAAYHHLPFYVAAPWSTVDLATPDGSAIPIEERGDEEVV 286 The following BLAST results are available for this feature:
BLAST of CX296561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296561 ID=CX296561; Name=CX296561; organism=Citrus clementina; type=EST; length=335bpback to top |