CX296561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_PSE14 (Methylthioribose-1-phosphate isomerase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=mtnA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.029e-24 Identity = 55/109 (50.46%), Postives = 73/109 (66.97%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL 332 Y ETRP+ QGSRLTA+EL ++ IP LM+ ++ VIVGADR+ ANGD NKIGTY LA+ A H + F V AP ++ID+ ++SG +I+IEER +ELL Sbjct: 196 YADETRPWLQGSRLTAWELANEGIPVTLNADSAAAHLMRTKGITWVIVGADRITANGDVANKIGTYQLAVAAMHHGVRFMVVAPSSTIDMEMASGDDIIIEERDGRELL 304
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_ANADE (Methylthioribose-1-phosphate isomerase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=mtnA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.029e-24 Identity = 55/109 (50.46%), Postives = 73/109 (66.97%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL 332 + ETRPF QG+RLTA+EL D IP LM G + V+VGADR+AANGD NKIGTY+LA+ A H + FYVAAP +++DL +G +I IEER++ E++ Sbjct: 179 FADETRPFLQGARLTAWELHRDGIPVTVLTDGMAGWLMARGEIGCVVVGADRIAANGDVANKIGTYALAVLAAHHRLPFYVAAPWSTVDLATPTGADIPIEERASDEVV 287
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_MICAE (Methylthioribose-1-phosphate isomerase OS=Microcystis aeruginosa GN=mtnA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.650e-24 Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 Y ETRP QG++LTA+E + IP M+ + AVIVGADR+AANGDT NKIGTYSLA+ AK HN+ FYVAAPL+++D +L G I IE+R + E+ Sbjct: 197 YADETRPRLQGAKLTAWECAREGIPVTVITDSMAAHCMQQKLIDAVIVGADRIAANGDTANKIGTYSLAVVAKAHNLPFYVAAPLSTVDFSLKDGTGIPIEQRDSAEI 304
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA2_THELT (Methylthioribose-1-phosphate isomerase 2 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=mtnA2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.650e-24 Identity = 55/110 (50.00%), Postives = 74/110 (67.27%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLC 335 + ETRP QG+RL+A+E+ IP +MK ++ +VGADR+AANGDT NKIGTY+LA+ AK+HN+ YV AP ++IDL +GQ+I IEERSA E+ C Sbjct: 185 FLDETRPRLQGARLSAWEMKELGIPHTIIVDGASGLVMKKFKIDLALVGADRIAANGDTANKIGTYNLAIVAKYHNVPLYVVAPTSTIDLKTPAGQDIPIEERSADEIRC 294
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: YQJQ_CAEEL (Uncharacterized protein C01G10.9 OS=Caenorhabditis elegans GN=C01G10.9 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.461e-24 Identity = 54/109 (49.54%), Postives = 70/109 (64.22%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL 332 Y ETRP+NQG RLT+ EL+H +P MK+ +V V+ GAD VA NGDT NKIGTY LA+ K HNI FY P T+I+ +++G+EI IEER + E+L Sbjct: 210 YVLETRPYNQGIRLTSIELLHGEVPFKLITDSMAAWAMKNHQVDCVLTGADNVARNGDTANKIGTYMLAVLCKHHNINFYPVVPFTTINKNIATGEEIKIEERPSAEML 318
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_THEM4 (Methylthioribose-1-phosphate isomerase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=mtnA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.461e-24 Identity = 57/108 (52.78%), Postives = 74/108 (68.52%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 + ETRP+ QG+RLTA+EL+ D I MK G+++AVIVGADRVA+NGD NKIGTY +A+ AK H I FYVAAP ++IDL +G++I IEER E+ Sbjct: 187 FADETRPYLQGARLTAWELMKDGIDVTLISDNMSGWAMKLGKINAVIVGADRVASNGDVANKIGTYMVAVLAKRHGIPFYVAAPTSTIDLNTQTGKDIPIEERKHTEV 294
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_MICAN (Methylthioribose-1-phosphate isomerase OS=Microcystis aeruginosa (strain NIES-843) GN=mtnA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.461e-24 Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 Y ETRP QG++LTA+E + + IP M+ + AVIVGADR+AANGDT NKIGTYSLA+ AK HN+ FYVAAPL+++D +L G I IE+R E+ Sbjct: 197 YADETRPRLQGAKLTAWECLREGIPVTVITDSMAAHCMQQKLIDAVIVGADRIAANGDTANKIGTYSLAVVAKAHNLPFYVAAPLSTVDFSLKDGTGIPIEQRDRAEI 304
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_NITOC (Methylthioribose-1-phosphate isomerase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=mtnA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.521e-24 Identity = 55/109 (50.46%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL 332 + ETRP+ QG+RLT +EL+ D IP L+ G V VIVGADR+AANGDT NKIG+Y LA+ A++HN+ F V AP ++ID LS G I IE+R +E+L Sbjct: 190 FADETRPWLQGARLTTWELLRDGIPVVLIADSVAPYLLGQGEVQWVIVGADRIAANGDTANKIGSYGLAVAARYHNVRFMVVAPTSTIDWNLSDGTRIPIEQRPPEEVL 298
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_ENTS8 (Methylthioribose-1-phosphate isomerase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mtnA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.521e-24 Identity = 58/108 (53.70%), Postives = 71/108 (65.74%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL 329 + ETRP QG RLTA+EL +P LM G+V AV VGADR+AANGD NKIGTYSLA+ AKFHN+ FYVAAP T++D +G I IE+R+A E+ Sbjct: 178 WVDETRPLLQGGRLTAWELGELGVPYQLITDSMAASLMAQGQVDAVWVGADRIAANGDVANKIGTYSLAVLAKFHNVPFYVAAPQTTLDPACPNGAAIPIEQRAAAEV 285
BLAST of CX296561 vs. ExPASy Swiss-Prot
Match: MTNA_PSEPW (Methylthioribose-1-phosphate isomerase OS=Pseudomonas putida (strain W619) GN=mtnA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.904e-24 Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 3 Query: 6 YCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL 332 Y ETRP+ QGSRLTA+EL ++ IP LMK ++ V+VGAD +AANGD +KIGTY LA+ A H + F V AP TSIDL L++G++I +EER A ELL Sbjct: 196 YAGETRPWLQGSRLTAWELANEGIPVTLCADSALAHLMKSKGITWVVVGADCIAANGDVASKIGTYQLAVNAMHHGVRFMVVAPSTSIDLNLATGEDIPLEERDADELL 304 The following BLAST results are available for this feature:
BLAST of CX296561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296561 ID=CX296561; Name=CX296561; organism=Citrus clementina; type=EST; length=335bpback to top |