CX296568
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 4.081e-13 Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = 2 Query: 26 VSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLK 331 V+GL++ G WI V P ++ VVN G Q+EV+TNG KS+EHR ++ + R S+A+F P + +I PA L K E Y +F D+M++Y +K Sbjct: 223 VNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNS-ALARTSVATFIMPTQECLIGPAKEFLSK--ENPPCYRTTMFRDFMRIYNVVK 321
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 6.961e-13 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 11 LQDDKVSGLQL-LKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDY 307 L+ + SGLQ+ L DG WI VPP S N+GD ++V+TNG++KSV HRV++ + R+S+ F P I P L++ E E+ +Y +F + +Y Sbjct: 206 LRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCK-KSRVSMIYFAGPSLTQRIAPLTCLIDNEDER--LYEEFTWSEY 302
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.187e-12 Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 5 LALQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMK 313 + LQDD V GL++L DG+W V P+ ++V+N+GD ++NG+YKS HR + E R SLA F P D V+ P P+ A Q YP F + D M+ Sbjct: 257 ILLQDD-VGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRE-RRSLAFFLCPREDRVVRPPPS-----AATPQHYPDFTWADLMR 352
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.187e-12 Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 5 LALQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMK 313 + LQDD V GL++L DG+W V P+ ++V+N+GD ++NG+YKS HR + E R SLA F P D V+ P P+ A Q YP F + D M+ Sbjct: 257 ILLQDD-VGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRE-RRSLAFFLCPREDRVVRPPPS-----AATPQHYPDFTWADLMR 352
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.187e-12 Identity = 38/100 (38.00%), Postives = 62/100 (62.00%), Query Frame = 2 Query: 11 LQDDKVSGLQL-LKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDY 307 L+ + SG Q+ L+DG WI VPP S +N+GD ++V+TNG++KSV HRV++ + R+S+ F P I P P+L++ K+ +Y +F + +Y Sbjct: 209 LRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLA-NGIDPRLSMIYFCGPPLSEKIAPLPSLMK---GKESLYKEFTWFEY 304
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.187e-12 Identity = 45/131 (34.35%), Postives = 71/131 (54.20%), Query Frame = 2 Query: 11 LQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVP-------LKFQAKEPRFEAMKAVE 376 L D+V GLQ KD WI V P+ + VVNLGD ++NG++K+ +H+ + ++ R+S+A+F NP +A++YP L +E EK + F + + + LK QAKE + +A A E Sbjct: 229 LLQDQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN-SSRLSIATFQNPAPEAIVYP---LKIREGEKSIMDEPITFAEMYRRKMSKDLELARLKKQAKEQQLQAEVAAE 355
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.551e-12 Identity = 35/101 (34.65%), Postives = 56/101 (55.45%), Query Frame = 2 Query: 11 LQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMK 313 L D+V GLQ+ D +W +PP H+ VVN+GD +TNG+YKS HR + ++ E R + A F P + V+ P L+ ++ YP F + +++ Sbjct: 255 LHQDQVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERE-RKTFAFFLCPKGEKVVKPPEELVNGVKSGERKYPDFTWSMFLE 354
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.551e-12 Identity = 37/100 (37.00%), Postives = 62/100 (62.00%), Query Frame = 2 Query: 11 LQDDKVSGLQL-LKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDY 307 L+ + +GLQ+ +KDG W+ VPP S +N+GD ++V+TNG++KSV+HRV++ T R+S+ F P I P P L+ ++ + +Y +F + Y Sbjct: 216 LRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADT-RRSRISMIYFGGPPLSQKIAPLPCLVPEQDD--WLYKEFTWSQY 312
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.551e-12 Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = 2 Query: 11 LQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKL 316 L ++V GLQ+ KDG W D + ++++V++GDQ+E+++NGKYKSV HR + + RMS F P D + P P L+ +E K K+ Y KL Sbjct: 229 LVPNEVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKE-KTRMSWPVFLEPPPDHEVGPIPKLVNEENPAKFKTKKYKDYAYCKL 329
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.893e-12 Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 11 LQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNP---GSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLY 319 L D + GLQ+L D W+DVPP+ ++VVN+GD +++ITN K+ SVEHRV++ G R+S+A F++ + V P +L +E Y +Y K Y Sbjct: 247 LLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGP-RISVACFFSSYLMANPRVYGPIKEILSEENPPN--YRDTTITEYAKFY 349 The following BLAST results are available for this feature:
BLAST of CX296568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296568 ID=CX296568; Name=CX296568; organism=Citrus clementina; type=EST; length=542bpback to top |