CX296571

Overview
NameCX296571
Unique NameCX296571
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length526
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15114 contig Ccv1_Contig15114:1..507. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX296571 vs. ExPASy Swiss-Prot
Match: THI4_YEAST (Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.061e-19
Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 3 
Query:  285 DLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLSGQLFS 524
            D + FKF PI+ES VSR MT RY  D+  +A +D    GAGS+GLS AY ++KN P++++ IIE SV+PGGG+WL GQLFS
Sbjct:   34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFS 114
The following BLAST results are available for this feature:
BLAST of CX296571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
THI4_YEAST6.061e-1956.79Thiazole biosynthetic enzyme, mitochondrial OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionC05146C03SK FerrChloL1 Citrus clementina cDNA clone C05146C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296571 ID=CX296571; Name=CX296571; organism=Citrus clementina; type=EST; length=526bp
CCGGGCTGCAGATTCGGCAGAGGCCTCGTGCCGAATTCGGCACGAGGCAA
ATTACTTCTCATTATCAAACTTCTAAGCAGCAGGGGGAAGGAGGGGTAAA
AAAAAAAAACATGGCAGCCATGGCTTCTACAGCTTTCGCTCCTTCAGTTT
CGTCTACCACCAATAAGCTCTTTGACTCATCCTTTCATGGGGCTCCCATG
TCACCTTCTCTTCTACGTCTTCAACCCATCAAATCTTCTCGTCCCAACAA
CTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTTGAACACTTTCA
AGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAAATGACGCGCAGG
TACATGACGGACATGATCACTTATGCTGACACTGATGTGGTAGTGGTTGG
TGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCAGCAAAAACCCCA
ACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGCGGTGGCGCG
TGGCTCAGTGGACAGCTCTTCTCTGC
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