CX296581

Overview
NameCX296581
Unique NameCX296581
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig695 contig Ccv1_Contig695:1..688. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: SCPL1_DICDI (Serine carboxypeptidase S10 family member 1 OS=Dictyostelium discoideum GN=DDB_G0291912 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 73/250 (29.20%), Postives = 104/250 (41.60%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFATGQLSTSCDQYQTQGVREYGQIDLYNVYAPLCKSSAP-PPPTAGVIREYDPCSDKYVN-----------SYLNLAEVQAALHA-KHTNWTTCGD-------LRWTDSPSTVLPTIQQ----LIASGIRVWI 684
            G GFSY   S  YS   +   +E+ Y+FL  +  ++P+Y     +I GESYAGHYVP  +Y I  KN     INLKG+AIGN  +D  +    +  F + H +   + NA         T  L  SC Q    G         YN+   +C +        AG    YD     Y N            YLNLA  + +     ++ W  C           W ++P   +PT+ +    L+ +G   WI
Sbjct:  108 GAGFSYVVDSDGYSTT-ETEISENLYSFLTQFLSKYPKYSKLPLYIFGESYAGHYVPSFSYYIYQKNLGLATINLKGLAIGNGMVDPYIQYGSLGPFAYAHGML--DINALKE------TEGLYESCQQAIDSGD--------YNMTTQICNNIMDIVQEYAGNFNVYDVSKTCYPNEPLCYNFTAIIDYLNLASTKQSFGVLPNSTWNVCSTQPYSAIIRDWFNTPINYIPTLLENYKVLVYNGNYDWI 340          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: SCP53_ARATH (Putative serine carboxypeptidase-like 53 OS=Arabidopsis thaliana GN=SCPL53 PE=5 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 1
Query:    4 AGVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYV 174
            AG GFSY+NT++D  N GD  TA D+Y FLV W ERFP+YK RDF+I GESYAGHYV
Sbjct:  176 AGTGFSYTNTTTDMENPGDMKTAADNYVFLVKWLERFPEYKGRDFYIAGESYAGHYV 232          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: NF314_NAEFO (Virulence-related protein Nf314 OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 54/151 (35.76%), Postives = 75/151 (49.67%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN--TSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYC--DFATGQLSTSCDQYQTQGVREYGQIDLYNVY 447
            GVGFSYSN++ DY NL D   A D    L ++  RFPQ+  R+ ++ GESY G YVP  AY I+  N    +  +NL GI +GN   D    +  +      H+L S +      K C  DF   Q   +C ++ T      G I+ Y +Y
Sbjct:  114 GVGFSYSNSTDDYQNLNDVQAASDMNNALRDFLTRFPQFIGRETYLAGESYGGVYVPTTAYNIVEGNGKGQQPYVNLVGILVGNGVTDAEADSNSIPPMMKYHSLISIKYYEEGYKACQGDFYANQNLPACQKFLTDSSNAMGNINPYYIY 264          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: CPVL_MOUSE (Probable serine carboxypeptidase CPVL OS=Mus musculus GN=Cpvl PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17
Identity = 61/233 (26.18%), Postives = 108/233 (46.35%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN-TSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFATGQLSTSCDQYQTQGVREYGQIDLYNVYAPLCKSSAPPPPT-----------AGVIREYDPCSDKYVNSYLNLAEVQAALHAKHTNWTTCGDLR---WTDSPSTVLPTIQQLI 660
            G GFS+++    Y+   +++ A+D Y+ L+ +F  FP+Y   DF++TGESYAG YVP LA+ I S N   K  I LKGIAIG+A+ D      G   F +   L  ++      K C        + C +Y    ++E   +  + +   L         +             +++  +P    Y   +L L +V+ A+H  + N++   ++      D+  +V P + +++
Sbjct:  158 GTGFSFTDHFQGYAT-SEDDVAQDLYSALIQFFTLFPEYAKNDFYVTGESYAGKYVPALAHYIHSLNPVRKFKIRLKGIAIGDAYTDPESIIGGYAAFLYEIGLLDEQQQKYFQKQC--------SKCVKY----IKEQEWMKAFEILDKLLDGDVTTGSSFFQNVTGCTNYYNILQCTEPKEQSYFAKFLTLPQVRQAIHVGNQNFSDGAEVEKHLREDTVKSVKPWLSEIM 377          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: YBY9_YEAST (Putative serine carboxypeptidase YBR139W OS=Saccharomyces cerevisiae GN=YBR139W PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.699e-16
Identity = 77/256 (30.08%), Postives = 114/256 (44.53%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNL---------CTKGMFDFFWTHALNSDE----TNAA-----INKYCDFATGQL-----STSCDQYQTQGVREYGQIDLYNVYAPLCKSSAPPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKHTNWTTC------GDLRWTDSPSTVLPTIQQLIASGIRVWIY 687
            GVGFSY +     + L      +D+Y FL  +FE FP  ++ DF I GESYAGHY+PQ+A+ I+ KN  +T  NL  + IGN   D  +         C KG +       L+S+E    + AA     +NK C  +   L     +  CD    +     G +++Y++  P   +S       G+         +YV+ Y+N  EVQ  L +   N++ C      G L   D        I +L+   I V IY
Sbjct:  174 GVGFSYGDEKVSSTKLA----GKDAYIFLELFFEAFPHLRSNDFHIAGESYAGHYIPQIAHEIVVKNPERT-FNLTSVMIGNGITDPLIQADYYEPMACGKGGYH----PVLSSEECEKMSKAAGRCRRLNKLCYASKSSLPCIVATAYCDSALLEPYINTG-LNVYDIRGPCEDNSTDGMCYTGL---------RYVDQYMNFPEVQETLGSDVHNYSGCDNDVFTGFLFTGDGSKPFQQYIAELLNHNIPVLIY 410          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: SCP48_ARATH (Serine carboxypeptidase-like 48 OS=Arabidopsis thaliana GN=SCPL48 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.438e-15
Identity = 70/246 (28.46%), Postives = 110/246 (44.72%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTIL--SKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFATGQLSTSCDQYQTQGVREYGQIDLYNVYAPLCKSSAPP-PPTAGVIREYDP--------CSD-KYVNSYLNLAEVQAALHAKHTNWTTCG-------DLRWTDSPSTVLPTIQQLIASGIRVWIY 687
            G GFSY++  SD  +  ++  + D Y FL  +F+  PQ+   DF+ITGESYAGHY+P LA  +   +KN   T INLKG AIGN   +  +      D+     L +   +  +N+Y  +AT      C Q   +   + G+ D       +C +        AG +  YD         C D   + ++LN   V+ AL      + +C         + W  +    +P    L+  GI++ +Y
Sbjct:  183 GTGFSYTSDQSDLRH-DEDGVSNDLYDFLQAFFKEHPQFVKNDFYITGESYAGHYIPALASRVHRGNKNKEGTHINLKGFAIGNGLTNPEIQYGAYADYALDMNLITQSDHDNLNRY--YAT------CQQSIKECSADGGEGDACASSYTVCNNIFQKIMDIAGNVNYYDVRKQCEGSLCYDFSNMENFLNQKSVRKALGVGDIEFVSCSTAVYEAMQMDWMRNLEVGIPA---LLQDGIKLLVY 416          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 54/165 (32.73%), Postives = 83/165 (50.30%), Query Frame = 1
Query:    4 AGVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHAL------NSDETNAAINKYCDFATGQLSTSCDQYQTQGVREYGQ--IDLYNVYAPLCKSSAP 474
            AGVGFSYS+     +N  D   AE++Y  L ++F  FP+YK+   F+TGESYAG Y+P LA  ++   +    +NL+G+A+GN           +  F + H L       S +T+      C+F   +    C     +  R  G+  +++YN+YAP C    P
Sbjct:  125 AGVGFSYSDDKMYVTN--DTEVAENNYEALKDFFRLFPEYKDNKLFLTGESYAGIYIPTLAVLVMQDPS----MNLQGLAVGNGLASYEQNDNSLVYFAYYHGLLGNRLWTSLQTHCCAQNKCNFYDNK-DPECVNNLLEVSRIVGKSGLNIYNLYAP-CAGGVP 281          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: CBP3_HORVU (Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CBP3 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.464e-15
Identity = 49/124 (39.52%), Postives = 65/124 (52.42%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTIL--SKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKY---CDFA 363
            G GFSYS+   D  +  +   + D Y FL  +F++ P++   DFFITGESYAGHY+P  A  +   +K    T INLKG AIGN   D  +  K   D+     L        INK+   C+FA
Sbjct:  175 GTGFSYSSDDRDTRH-DETGVSNDLYDFLQVFFKKHPEFIKNDFFITGESYAGHYIPAFASRVHQGNKKNEGTHINLKGFAIGNGLTDPAIQYKAYTDYALEMNLIQKADYERINKFIPPCEFA 297          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: CBP3_WHEAT (Serine carboxypeptidase 3 OS=Triticum aestivum GN=CBP3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.320e-15
Identity = 49/124 (39.52%), Postives = 65/124 (52.42%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTIL--SKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKY---CDFA 363
            G GFSYS+   D  +  +   + D Y FL  +F++ P++   DFFITGESYAGHY+P  A  +   +K    T INLKG AIGN   D  +  K   D+     L        INK+   C+FA
Sbjct:  168 GTGFSYSSDDRDTRH-DEAGVSNDLYDFLQVFFKKHPEFVKNDFFITGESYAGHYIPAFASRVHQGNKKNEGTHINLKGFAIGNGLTDPAIQYKAYTDYALDMNLIQKADYDRINKFIPPCEFA 290          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: CBP3_ORYSJ (Serine carboxypeptidase 3 OS=Oryza sativa subsp. japonica GN=CBP3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.320e-15
Identity = 48/124 (38.71%), Postives = 65/124 (52.42%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSK--TIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKY---CDFA 363
            G GFSYS+   D  +  +   + D Y+FL  +F++ P++   DFFITGESYAGHY+P  A  +   N +     INLKG AIGN   D  +  K   D+     L        INK+   C+FA
Sbjct:  168 GTGFSYSSDDRDTRH-DETGVSNDLYSFLQVFFKKHPEFAKNDFFITGESYAGHYIPAFASRVHQGNKANEGIHINLKGFAIGNGLTDPAIQYKAYTDYALDMNLIKKSDYDRINKFIPPCEFA 290          
The following BLAST results are available for this feature:
BLAST of CX296581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
SCPL1_DICDI6.896e-1829.20Serine carboxypeptidase S10 family member 1 OS=Dic... [more]
SCP53_ARATH6.896e-1868.42Putative serine carboxypeptidase-like 53 OS=Arabid... [more]
NF314_NAEFO9.006e-1835.76Virulence-related protein Nf314 OS=Naegleria fowle... [more]
CPVL_MOUSE9.958e-1726.18Probable serine carboxypeptidase CPVL OS=Mus muscu... [more]
YBY9_YEAST1.699e-1630.08Putative serine carboxypeptidase YBR139W OS=Saccha... [more]
SCP48_ARATH1.438e-1528.46Serine carboxypeptidase-like 48 OS=Arabidopsis tha... [more]
PPGB_MOUSE3.203e-1532.73Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
CBP3_HORVU5.464e-1539.52Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CB... [more]
CBP3_WHEAT9.320e-1539.52Serine carboxypeptidase 3 OS=Triticum aestivum GN=... [more]
CBP3_ORYSJ9.320e-1538.71Serine carboxypeptidase 3 OS=Oryza sativa subsp. j... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05146D03SK FerrChloL1 Citrus clementina cDNA clone C05146D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296581 ID=CX296581; Name=CX296581; organism=Citrus clementina; type=EST; length=688bp
GAGGCAGGAGTCGGGTTCTCATATTCAAATACCTCTTCGGACTACAGCAA
TCTCGGCGACAATAACACAGCTGAGGATTCTTATACTTTCCTCGTGAATT
GGTTCGAGAGATTTCCCCAATACAAAAACCGTGACTTCTTTATTACTGGT
GAGAGCTATGCTGGCCACTATGTCCCTCAACTTGCTTACACCATTCTCTC
CAAGAACACAAGTAAAACAATCATCAACCTCAAAGGCATAGCTATTGGGA
ATGCTTGGATAGATGATAATTTGTGCACCAAAGGAATGTTTGACTTTTTC
TGGACGCATGCTCTCAATTCCGATGAAACCAATGCCGCGATTAACAAATA
TTGTGACTTTGCGACCGGTCAACTTTCAACTTCGTGTGATCAATATCAAA
CTCAAGGAGTTAGGGAGTATGGACAGATTGATCTATACAACGTTTACGCT
CCACTTTGCAAATCATCAGCACCACCACCTCCAACAGCCGGCGTTATCAG
AGAATATGACCCCTGCTCCGACAAGTACGTTAATTCCTATTTAAACCTTG
CCGAGGTGCAAGCAGCTCTTCATGCGAAACATACCAACTGGACAACTTGC
GGCGACTTGAGATGGACCGACAGCCCATCAACTGTGCTTCCAACAATACA
GCAGCTGATAGCAAGTGGAATTAGGGTGTGGATATACA
back to top