CX296581

Overview
NameCX296581
Unique NameCX296581
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig695 contig Ccv1_Contig695:1..688. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: SCP49_ARATH (Serine carboxypeptidase-like 49 OS=Arabidopsis thaliana GN=SCPL49 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 39/91 (42.86%), Postives = 49/91 (53.85%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSK--TIINLKGIAIGNAWIDDNL 273
            G GFSY+   SD  +  +   + D Y FL  +F   P+    DF+ITGESYAGHY+P  A  +   N +     INLKG AIGN   D  L
Sbjct:  181 GTGFSYTTDKSDIRH-DETGVSNDLYDFLQAFFAEHPKLAKNDFYITGESYAGHYIPAFASRVHKGNKANEGVHINLKGFAIGNGLTDPAL 270          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: YXD2_CAEEL (Uncharacterized serine carboxypeptidase C08H9.1 OS=Caenorhabditis elegans GN=C08H9.1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11
Identity = 62/241 (25.73%), Postives = 98/241 (40.66%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFER-FPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTI--INLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYC-----------DFATGQLSTSCDQYQTQGVREYGQI---------------DLYNVYAPLCKSSAPPPPTAGVIRE------------------------YDPCSDKYVNSYLNLAEVQAAL 570
            GVGFSY    S+++ + D++ AE ++  ++++F+R    Y N DFFI  ESY G Y P L+  ++   + +     N KG+ IGN +++  L T  M  +   H   S +    I + C           DF     +T+   Y      E G++               D +N Y   C ++   P     I+E                        Y   +D  ++ YLNL EVQ AL
Sbjct:  122 GVGFSYDTEQSNFTKVNDDSIAEQNFNSVIDFFQRKHSSYVNHDFFIAAESYGGVYGPMLSALVVDSISKREFPNENFKGLIIGNGFMNVKLSTNTMILWSAYHDRTSPDEWDEIKEKCATSGAHDVDYYDFMQFMKTTNKMDYLADNSTECGRLIEPLLGQFSETFDGYDFFNYYHD-CYTNFSIPNATDPIKETLAQIPRRRISALFNKHSTDGQASYRCWADDALHKYLNLKEVQNAL 361          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: CBPY_PICPG (Carboxypeptidase Y OS=Pichia pastoris (strain GS115) GN=PRC1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11
Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 1
Query:   10 VGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 264
            VGFSYS++S   + +      ED Y FL  +F+ FP+Y+  DF I GESYAGHY+P  A  ILS+       NL  + IGN   D
Sbjct:  205 VGFSYSSSSVSNTVVA----GEDVYAFLQLFFQHFPEYQTNDFHIAGESYAGHYIPVFADEILSQKNRN--FNLTSVLIGNGLTD 283          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: SCP50_ARATH (Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana GN=SCPL50 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11
Identity = 38/86 (44.19%), Postives = 48/86 (55.81%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 264
            GVGFS + +  D         AE  Y  LV + E+ P ++NR  + TGESYAG YVP + Y IL K      +NLKG+AIGN   D
Sbjct:  122 GVGFSIAASQQDIPT-NQRQVAEHLYAALVEFLEQNPSFENRPVYFTGESYAGKYVPAIGYYIL-KEKPNGKVNLKGLAIGNGLTD 205          
The following BLAST results are available for this feature:
BLAST of CX296581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
SCP49_ARATH5.654e-1242.86Serine carboxypeptidase-like 49 OS=Arabidopsis tha... [more]
YXD2_CAEEL1.260e-1125.73Uncharacterized serine carboxypeptidase C08H9.1 OS... [more]
CBPY_PICPG1.645e-1144.71Carboxypeptidase Y OS=Pichia pastoris (strain GS11... [more]
SCP50_ARATH3.665e-1144.19Serine carboxypeptidase-like 50 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC05146D03SK FerrChloL1 Citrus clementina cDNA clone C05146D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296581 ID=CX296581; Name=CX296581; organism=Citrus clementina; type=EST; length=688bp
GAGGCAGGAGTCGGGTTCTCATATTCAAATACCTCTTCGGACTACAGCAA
TCTCGGCGACAATAACACAGCTGAGGATTCTTATACTTTCCTCGTGAATT
GGTTCGAGAGATTTCCCCAATACAAAAACCGTGACTTCTTTATTACTGGT
GAGAGCTATGCTGGCCACTATGTCCCTCAACTTGCTTACACCATTCTCTC
CAAGAACACAAGTAAAACAATCATCAACCTCAAAGGCATAGCTATTGGGA
ATGCTTGGATAGATGATAATTTGTGCACCAAAGGAATGTTTGACTTTTTC
TGGACGCATGCTCTCAATTCCGATGAAACCAATGCCGCGATTAACAAATA
TTGTGACTTTGCGACCGGTCAACTTTCAACTTCGTGTGATCAATATCAAA
CTCAAGGAGTTAGGGAGTATGGACAGATTGATCTATACAACGTTTACGCT
CCACTTTGCAAATCATCAGCACCACCACCTCCAACAGCCGGCGTTATCAG
AGAATATGACCCCTGCTCCGACAAGTACGTTAATTCCTATTTAAACCTTG
CCGAGGTGCAAGCAGCTCTTCATGCGAAACATACCAACTGGACAACTTGC
GGCGACTTGAGATGGACCGACAGCCCATCAACTGTGCTTCCAACAATACA
GCAGCTGATAGCAAGTGGAATTAGGGTGTGGATATACA
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