CX296583

Overview
NameCX296583
Unique NameCX296583
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.000e-36
Identity = 68/89 (76.40%), Postives = 80/89 (89.89%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            ER+PIP+ VITGRR++  IEKE+NFKQ G+RYRSWAPDRQERFL RW+ AL DPR+T E+RSIWVSYWSQAD+S GQKLASRLNVRP++
Sbjct:  404 ERHPIPNAVITGRRDRRVIEKEDNFKQAGDRYRSWAPDRQERFLRRWVDALSDPRLTLEIRSIWVSYWSQADKSFGQKLASRLNVRPTM 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 9.000e-36
Identity = 66/89 (74.16%), Postives = 79/89 (88.76%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E+YP P  V +G+RE+  IEKENNFK+PGERYR++ P+RQERF+ RWI AL DPR+THE+RSIW+SYWSQAD+SLGQKLASRLNVRPSI
Sbjct:  404 EKYPTPPAVCSGKRERCIIEKENNFKEPGERYRTFTPERQERFIQRWIDALSDPRITHEIRSIWISYWSQADKSLGQKLASRLNVRPSI 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.535e-35
Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            ER P+P   + G+REK  IEKENNFKQPGERYRSW  DRQERF+ RW+ AL DPRVTHE+RSIW+SYWSQADRSLGQK+AS LN++PSI
Sbjct:  404 ERVPVPPRTLGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.535e-35
Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E+ P+P  ++ G+REK  IEKENNFKQPGERYRSW  DRQERF+ RW+ AL DPRVTHE+RSIW+SYWSQADRSLGQK+AS LN++PSI
Sbjct:  404 EKVPVPPRILGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA1_RICCO (Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.619e-35
Identity = 65/89 (73.03%), Postives = 78/89 (87.64%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E +P+PS + +G+REK  IEKENNFKQPGERYRSWAPDRQERFLNR +  L DPR+THE+R+IW+SYW Q D+SLGQKLA+RLNV+PSI
Sbjct:  404 ESFPVPSAICSGKREKCVIEKENNFKQPGERYRSWAPDRQERFLNRLVGGLSDPRITHELRTIWISYWIQCDKSLGQKLATRLNVKPSI 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA1_WHEAT (Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.217e-34
Identity = 66/88 (75.00%), Postives = 77/88 (87.50%), Query Frame = -2
Query:  211 RYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 474
            RYPIPS  + GRREK  IEKENNFKQPGERYRS  P RQERF+NRWI AL DPR+THE+++IW+SYWSQAD+SLGQKLASRL+ +PS+
Sbjct:  405 RYPIPSRTLNGRREKMVIEKENNFKQPGERYRSMDPARQERFINRWIDALSDPRLTHEIKAIWLSYWSQADKSLGQKLASRLSSKPSM 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.895e-34
Identity = 66/88 (75.00%), Postives = 79/88 (89.77%), Query Frame = -2
Query:  214 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPS 477
            E+YPIP   ++G+R+K  IEKENNFKQPGERYRS++PDRQERF+NR +  L DPRVTHEVRSIWVSYWSQAD+SLGQK+ASRLNV+P+
Sbjct:  404 EQYPIPPVRLSGKRDKCVIEKENNFKQPGERYRSFSPDRQERFINRVVGGLSDPRVTHEVRSIWVSYWSQADKSLGQKIASRLNVKPN 491          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA_CAPAN (Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.895e-34
Identity = 63/89 (70.79%), Postives = 79/89 (88.76%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E+YPIPS V+TGRREK  I KENNFKQ GERYRSWAPDRQ+R++N+W+++L DPR THE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  404 EQYPIPSCVLTGRREKCVIPKENNFKQAGERYRSWAPDRQDRYINKWVESLSDPRATHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.938e-34
Identity = 64/89 (71.91%), Postives = 79/89 (88.76%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E+ PIP+ + +GRREK  IEKE+NF+QPG+RYRSWAPDRQERFL R + AL +PR+THE+RSIWVS+W+Q D+SLGQKLASRLNVRP+I
Sbjct:  404 EKVPIPNAICSGRREKCVIEKEDNFRQPGDRYRSWAPDRQERFLCRLVNALSEPRITHEIRSIWVSWWTQCDKSLGQKLASRLNVRPNI 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA_PEA (Catalase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.100e-33
Identity = 67/91 (73.63%), Postives = 78/91 (85.71%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKAL--CDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            ER PIP+  ++ RREK  I K+N+FKQ GERYR+WAPDRQERFL RW++AL   DPR+THE+RSIWVSYWSQADRSLGQKLAS LN+RPSI
Sbjct:  404 ERVPIPTTHLSARREKCNIPKQNHFKQAGERYRTWAPDRQERFLRRWVEALSDTDPRITHEIRSIWVSYWSQADRSLGQKLASHLNMRPSI 494          
The following BLAST results are available for this feature:
BLAST of CX296583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA_AVIMR9.000e-3676.40Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA2_ARATH9.000e-3674.16Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA3_SOYBN1.535e-3574.16Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]
CATA1_SOYBN1.535e-3573.03Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1[more]
CATA1_RICCO2.619e-3573.03Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=... [more]
CATA1_WHEAT2.217e-3475.00Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1[more]
CATA_HELAN2.895e-3475.00Catalase OS=Helianthus annuus PE=2 SV=1[more]
CATA_CAPAN2.895e-3470.79Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1[more]
CATA2_RICCO4.938e-3471.91Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]
CATA_PEA1.100e-3373.63Catalase OS=Pisum sativum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05146D06SK FerrChloL1 Citrus clementina cDNA clone C05146D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296583 ID=CX296583; Name=CX296583; organism=Citrus clementina; type=EST; length=667bp
GAGGCCTCGTGCCGAATTCGGCACGAGGTTTTATTAATTGAAACAACAGG
AAAAGAGTCACATAACATGCAAGTTTATTTTCTATATTACAATATACAAC
AGCAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGTGTTCAC
TCCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGT
GACACCTTCAAATGCTTGGCCTCACATTGAGACGAGAAGCTAGCTTCTGA
CCCAGAGATCTGTCGGCCTGAGACCAGTAAGAGACCCATATGCTGCGAAC
CTCATGGGTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGGA
ACCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTGC
TTGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAAT
TACATCAGAAGGAATGGGATATCTCTCCCTCGTGCCGAATTCGGCACGAG
GCCTCGTGCCGAATTCGGCACGAGGGCTGGATTGCTATCTTCATAACTAT
CCAAGCCACCAAGGTTCAAGACCTGGTAGAGACGGTAGAAGAAGAAACAC
CAAGAAGAAGGAAAAAAAAAAAAAAAAAAACCTCGTGCCGAATTCGGCAC
AAGGGGGGGGGCCCGGT
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