CX296583

Overview
NameCX296583
Unique NameCX296583
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.913e-31
Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E+ PIP  V+TG REK  I+KENNF+Q GERYRS+ P RQ+RFL RW+ AL DPR+THE+R IW+SYWSQ D SLGQKLASRLN++P++
Sbjct:  404 EKVPIPPRVLTGCREKCVIDKENNFQQAGERYRSFDPARQDRFLQRWVDALSDPRITHELRGIWISYWSQCDASLGQKLASRLNLKPNM 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA1_HORVU (Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.717e-31
Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E+YP+P  V++G REK  I+KENNFKQ GERYRS+ P RQ+RFL RW+ AL D RVTHE++SIWVSYWSQ D SLGQKLASRL ++P++
Sbjct:  404 EKYPMPPRVLSGCREKCIIDKENNFKQAGERYRSFDPARQDRFLQRWVDALTDARVTHEIQSIWVSYWSQCDASLGQKLASRLKIKPNM 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.536e-30
Identity = 57/89 (64.04%), Postives = 74/89 (83.15%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E+YPIP+ V+ GRR    I KENNFKQ GERYRSW  DRQ+R++ +W+++L DPRVTHE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  404 EQYPIPACVLNGRRTNCVIPKENNFKQAGERYRSWESDRQDRYITKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.326e-30
Identity = 57/89 (64.04%), Postives = 74/89 (83.15%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E+YPIP+ V+ GRR    I KENN KQ GERYRSW  DRQ+R++N+W+++L DPRVTHE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  404 EQYPIPACVLNGRRTNCVIPKENNSKQAGERYRSWESDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.259e-29
Identity = 59/89 (66.29%), Postives = 73/89 (82.02%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E+ P+P  V++G REK  I+KENNFKQ GERYRS+ P RQ+RFL RW+ AL D RVTHE++SIWVSYWSQ D SLGQKLASRL ++P++
Sbjct:  404 EKDPMPPRVLSGCREKCIIDKENNFKQAGERYRSFDPARQDRFLQRWVDALTDARVTHEIQSIWVSYWSQCDASLGQKLASRLKIKPNM 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA1_MAIZE (Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.159e-29
Identity = 58/89 (65.17%), Postives = 71/89 (79.78%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E+ PIP  V+T  REK  I+KENNFKQ GERYRS+ P RQ+RF+ RW+ AL  PRVTHE R+IW+SYWSQ D +LGQKL SRLN++PS+
Sbjct:  404 EKVPIPPRVLTRCREKCIIQKENNFKQAGERYRSFDPARQDRFIQRWVDALTHPRVTHEHRTIWISYWSQCDAALGQKLPSRLNLKPSM 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSJ (Catalase isozyme A OS=Oryza sativa subsp. japonica GN=CATA PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.881e-25
Identity = 53/86 (61.63%), Postives = 68/86 (79.07%), Query Frame = -2
Query:  211 PIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 468
            PI    + GRR+KA I K+N+FKQPGERYRSWAPDRQERF+ R+   L  P+V+ E+R+IWV+Y SQ D SLG K+A+RLNV+PS+
Sbjct:  407 PITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSI (Catalase isozyme A OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.881e-25
Identity = 53/86 (61.63%), Postives = 68/86 (79.07%), Query Frame = -2
Query:  211 PIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 468
            PI    + GRR+KA I K+N+FKQPGERYRSWAPDRQERF+ R+   L  P+V+ E+R+IWV+Y SQ D SLG K+A+RLNV+PS+
Sbjct:  407 PITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.457e-25
Identity = 49/87 (56.32%), Postives = 70/87 (80.46%), Query Frame = -2
Query:  211 YPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 471
            +P+P+  + G+REK  I+KEN+F QPGERYRSWAPDRQ+RF+ R+  AL  P+V+HE+R IW+ + S+ D+S G K+A+RLNV+PS+
Sbjct:  408 FPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVRRFSDALAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 494          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.490e-22
Identity = 47/87 (54.02%), Postives = 68/87 (78.16%), Query Frame = -2
Query:  211 YPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 471
            +P+P+  + G+REK  I+KEN+F QPGERYRSWAPDRQ+RF+    + L  P+V+HE+R IW+ + S+ D+S G K+A+RLNV+PS+
Sbjct:  407 FPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFV-ALRRRLAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 492          
The following BLAST results are available for this feature:
BLAST of CX296583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA2_ORYSJ3.913e-3167.42Catalase isozyme B OS=Oryza sativa subsp. japonica... [more]
CATA1_HORVU8.717e-3167.42Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2... [more]
CATA2_SOLTU2.536e-3064.04Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_SOLTU4.326e-3064.04Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]
CATA2_WHEAT1.259e-2966.29Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1[more]
CATA1_MAIZE8.159e-2965.17Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1[more]
CATA1_ORYSJ1.881e-2561.63Catalase isozyme A OS=Oryza sativa subsp. japonica... [more]
CATA1_ORYSI1.881e-2561.63Catalase isozyme A OS=Oryza sativa subsp. indica P... [more]
CATA2_HORVU2.457e-2556.32Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA_SECCE1.490e-2254.02Catalase OS=Secale cereale PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05146D06SK FerrChloL1 Citrus clementina cDNA clone C05146D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296583 ID=CX296583; Name=CX296583; organism=Citrus clementina; type=EST; length=667bp
GAGGCCTCGTGCCGAATTCGGCACGAGGTTTTATTAATTGAAACAACAGG
AAAAGAGTCACATAACATGCAAGTTTATTTTCTATATTACAATATACAAC
AGCAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGTGTTCAC
TCCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGT
GACACCTTCAAATGCTTGGCCTCACATTGAGACGAGAAGCTAGCTTCTGA
CCCAGAGATCTGTCGGCCTGAGACCAGTAAGAGACCCATATGCTGCGAAC
CTCATGGGTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGGA
ACCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTGC
TTGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAAT
TACATCAGAAGGAATGGGATATCTCTCCCTCGTGCCGAATTCGGCACGAG
GCCTCGTGCCGAATTCGGCACGAGGGCTGGATTGCTATCTTCATAACTAT
CCAAGCCACCAAGGTTCAAGACCTGGTAGAGACGGTAGAAGAAGAAACAC
CAAGAAGAAGGAAAAAAAAAAAAAAAAAAACCTCGTGCCGAATTCGGCAC
AAGGGGGGGGGCCCGGT
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