CX296592

Overview
NameCX296592
Unique NameCX296592
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length614
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX296592 vs. ExPASy Swiss-Prot
Match: NIT1_MOUSE (Nitrilase homolog 1 OS=Mus musculus GN=Nit1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.684e-14
Identity = 45/122 (36.89%), Postives = 64/122 (52.46%), Query Frame = 1 
Query:  262 SEVARLLKITIVGGSIPERSGD-----RLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGET-PTIVDTDVGRIGIGICYDIRFQELXMIYGARGAHLICYPGAFNMTTGP 609
            S++AR   I +  G   ER  D     ++YN   +  S G ++A +RK HL D++IPG+    ES     G T    V T  G++G+ ICYD+RF EL +     GA ++ Y  AF   TGP
Sbjct:  110 SQLARECGIWLSLGGFHERGQDWEQNQKIYNCHVLLNSKGSVVASYRKTHLCDVEIPGQGPMRESNYTKPGGTLEPPVKTPAGKVGLAICYDMRFPELSLKLAQAGAEILTYSSAFGSVTGP 231
The following BLAST results are available for this feature:
BLAST of CX296592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
NIT1_MOUSE3.684e-1436.89Nitrilase homolog 1 OS=Mus musculus GN=Nit1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC05146E04SK FerrChloL1 Citrus clementina cDNA clone C05146E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296592 ID=CX296592; Name=CX296592; organism=Citrus clementina; type=EST; length=614bp
GCCAGGGCCCCACCCGCCCTTCCCTTGCCCACTCCCCCCGTCACCAAGTT
TAAGGTTGGGCTTTGCCAATTGTCAGTAACGGCTGACAAAGAAAGGAACA
TCGCTCATGCTCGTAGAGCCATTGAGGAGGCGGCTGAGAAAGGCGCCAAG
CTCATTATTTTGCCTGAGATTTGGAACAGTCCCTATTCGAATGACAGCTT
CCCAGTTTATGCCGAAGACATTGATGCTGGTGGTGATGCATCCCCTTCCA
CCGCCATGCTTTCTGAAGTTGCTCGTCTTCTGAAGATCACTATAGTTGGC
GGCTCTATTCCCGAACGTTCTGGGGATCGATTGTACAATACTTGCTGCGT
CTTTGGTTCTGATGGAAAACTGATAGCTAAGCACCGGAAGATACACCTTT
TTGATATTGACATTCCCGGGAAGATTACCTTTATAGAATCAAAGTCCCTT
ACAGCAGGGGAGACACCAACCATTGTGGACACAGATGTTGGGCGTATTGG
AATAGGTATTTGTTATGATATTCGGTTTCAGGAACTGGNCATGATATATG
GAGCAAGAGGTGCTCACTTGATATGCTATCCTGGGGCATTTAACATGACT
ACTGGGCCATTGCA
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