CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: UUP_BUCAI (ABC transporter ATP-binding protein uup OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=uup PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.243e-20 Identity = 56/150 (37.33%), Postives = 91/150 (60.67%), Query Frame = 1 Query: 7 EFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAE----DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 +F ++++ + I+ G+K A+IG NGCGKSTL+K+I+G KP+ G++ +G+ + +YF+QN++ L+ +K+++E + E + R I L FK + L V LSGGE RL + +KPS +L+LDEPTN LD+ Sbjct: 296 DFLVNNKIIIKNFSSIIQHGDKLALIGDNGCGKSTLIKIIIGENKPQKGKIYIGK-GLKISYFDQNRS-FLNPNKSIIENIDYGKEKILLNSREQHIIRYLKNFLFKPNQLKSLVKTLSGGECNRLLLAQLFLKPSNVLILDEPTNDLDL 443
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YHES_ECOLI (Uncharacterized ABC transporter ATP-binding protein yheS OS=Escherichia coli (strain K12) GN=yheS PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20 Identity = 53/148 (35.81%), Postives = 82/148 (55.41%), Query Frame = 1 Query: 13 GYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 GY DR++ + L + G + ++G NG GKSTL+KL+ G P GE+ L + + YF Q+Q E L D++ ++ +A A ++ LG F+ D + + SGGEKARL + + LL+LDEPTNHLD+ ++ Sbjct: 321 GYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAK-GIKLGYFAQHQLEYLRADESPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQ 467
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YHES_ECO57 (Uncharacterized ABC transporter ATP-binding protein yheS OS=Escherichia coli O157:H7 GN=yheS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.930e-20 Identity = 53/148 (35.81%), Postives = 82/148 (55.41%), Query Frame = 1 Query: 13 GYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 GY DR++ + L + G + ++G NG GKSTL+KL+ G P GE+ L + + YF Q+Q E L D++ ++ +A A ++ LG F+ D + + SGGEKARL + + LL+LDEPTNHLD+ ++ Sbjct: 321 GYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAK-GIKLGYFAQHQLEYLRADESPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQ 467
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YJJK_SHIFL (Uncharacterized ABC transporter ATP-binding protein yjjK OS=Shigella flexneri GN=yjjK PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20 Identity = 58/147 (39.46%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDI----KGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 Y DRLL + + +I +G IIGPNG GKSTL ++I G E+P G + LGE L + +++D KTV E V+ + +I + + +GR NFK ++V LSGGE+ RL K + +L+LDEPTN LDI Sbjct: 333 YGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASV--DQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDI 477 HSP 2 Score: 69.3218 bits (168), Expect = 8.545e-12 Identity = 56/180 (31.11%), Postives = 86/180 (47.78%), Query Frame = 1 Query: 25 RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV----------------LLGEHNVLPNYFEQNQAEALDLDKTVLETVAE-----------AAEDWRIDDI------KGLLGRCNFKADML-----DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPS 450 R + +L+ G K ++G NG GKSTLL+++ G++K GE L EH V + E+ +E ++ K + E A AAE R+++I L + AD L D K++ LSGGE+ R+A C+ +++ +L+LDEPTNHLD S Sbjct: 19 RHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRES-IEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAES 197
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YJJK_ECOLI (Uncharacterized ABC transporter ATP-binding protein yjjK OS=Escherichia coli (strain K12) GN=yjjK PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20 Identity = 58/147 (39.46%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDI----KGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 Y DRLL + + +I +G IIGPNG GKSTL ++I G E+P G + LGE L + +++D KTV E V+ + +I + + +GR NFK ++V LSGGE+ RL K + +L+LDEPTN LDI Sbjct: 333 YGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASV--DQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDI 477 HSP 2 Score: 69.3218 bits (168), Expect = 8.545e-12 Identity = 56/180 (31.11%), Postives = 86/180 (47.78%), Query Frame = 1 Query: 25 RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV----------------LLGEHNVLPNYFEQNQAEALDLDKTVLETVAE-----------AAEDWRIDDI------KGLLGRCNFKADML-----DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPS 450 R + +L+ G K ++G NG GKSTLL+++ G++K GE L EH V + E+ +E ++ K + E A AAE R+++I L + AD L D K++ LSGGE+ R+A C+ +++ +L+LDEPTNHLD S Sbjct: 19 RHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRES-IEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAES 197
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YJJK_ECO57 (Uncharacterized ABC transporter ATP-binding protein yjjK OS=Escherichia coli O157:H7 GN=yjjK PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20 Identity = 58/147 (39.46%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDI----KGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 Y DRLL + + +I +G IIGPNG GKSTL ++I G E+P G + LGE L + +++D KTV E V+ + +I + + +GR NFK ++V LSGGE+ RL K + +L+LDEPTN LDI Sbjct: 333 YGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASV--DQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDI 477 HSP 2 Score: 69.3218 bits (168), Expect = 8.545e-12 Identity = 56/180 (31.11%), Postives = 86/180 (47.78%), Query Frame = 1 Query: 25 RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV----------------LLGEHNVLPNYFEQNQAEALDLDKTVLETVAE-----------AAEDWRIDDI------KGLLGRCNFKADML-----DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPS 450 R + +L+ G K ++G NG GKSTLL+++ G++K GE L EH V + E+ +E ++ K + E A AAE R+++I L + AD L D K++ LSGGE+ R+A C+ +++ +L+LDEPTNHLD S Sbjct: 19 RHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRES-IEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAES 197
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ABCF3_RAT (ATP-binding cassette sub-family F member 3 OS=Rattus norvegicus GN=Abcf3 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.217e-19 Identity = 51/151 (33.77%), Postives = 87/151 (57.62%), Query Frame = 1 Query: 7 EFGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 +F Y+ + ++F+R +++ + + ++G NG GKST+LKL+MG P G + N+ YF Q+ E LDL+ + +E +A ++ + LGR ++ R V+ LSGG+K+R+AF + + +LDEPTNHLD+ + E Sbjct: 498 DFYYDPKHIIFSRLSVSADLESRICVVGENGAGKSTMLKLLMGDLAPVRG-IRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIE 647
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: Y1252_HAEIN (Uncharacterized ABC transporter ATP-binding protein HI1252 OS=Haemophilus influenzae GN=HI1252 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 9.425e-19 Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDI----KGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 Y DR L + + +I +G IIG NG GKSTL +++ G E+P G V +GE VL + +++D KTV E V+ + I + + +GR NFK ++V LSGGE+ RL K + + +L+LDEPTN LD+ Sbjct: 334 YGDRTLIDDLSFSIPKGAIVGIIGANGAGKSTLFRMLSGQEQPDSGSVTMGETVVLASV--DQFRDSMDDKKTVWEEVSNGQDILTIGNFEIPSRAYVGRFNFKGVDQQKRVGELSGGERGRLHLAKLLQRGGNVLLLDEPTNDLDV 478
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ABCF3_MOUSE (ATP-binding cassette sub-family F member 3 OS=Mus musculus GN=Abcf3 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.231e-18 Identity = 51/151 (33.77%), Postives = 86/151 (56.95%), Query Frame = 1 Query: 7 EFGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 +F Y+ + +F+R +++ + + ++G NG GKST+LKL+MG P G + N+ YF Q+ E LDL+ + +E +A ++ + LGR ++ R V+ LSGG+K+R+AF + + +LDEPTNHLD+ + E Sbjct: 498 DFYYDPKHSIFSRLSVSADLESRICVVGENGAGKSTMLKLLMGDLSPVRG-IRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGLPEEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIE 647
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ABCF3_PONAB (ATP-binding cassette sub-family F member 3 OS=Pongo abelii GN=ABCF3 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.100e-18 Identity = 50/151 (33.11%), Postives = 87/151 (57.62%), Query Frame = 1 Query: 7 EFGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 +F Y+ + ++F+R +++ + + ++G NG GKST+LKL++G P G + N+ YF Q+ E LDL+ + +E +A ++ + LGR ++ R V+ LSGG+K+R+AF + + +LDEPTNHLD+ + E Sbjct: 498 DFYYDPKHVIFSRLSVSADLESRICVVGENGAGKSTMLKLLLGDLAPVRG-IRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIE 647 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |