CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_OENOB (Spermidine/putrescine import ATP-binding protein potA OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=potA PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.937e-12 Identity = 48/155 (30.97%), Postives = 80/155 (51.61%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAE--------ALDLDKTVLETVA-----EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y + + + +L IE G+ ++GP+G GKST+L LI G +P GG++L+ NV N NQ + AL + V + VA + +ID + + + D DR++S +SGG++ R+A + + +L+LDEP + LD Sbjct: 19 YGETKVLKKVDLEIEEGKFYTLLGPSGSGKSTILSLISGRLQPTGGDILIEGKNV--NSLPSNQRKVNTVFQNYALFPNMNVYDNVAFGPSIKGFSKKKIDQLVKSMLKLVKLDDFSDREISEISGGQQQRVAIARALANQPKVLLLDEPLSALD 171
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_LEGPA (Spermidine/putrescine import ATP-binding protein potA OS=Legionella pneumophila (strain Paris) GN=potA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.937e-12 Identity = 50/163 (30.67%), Postives = 81/163 (49.69%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG-------------EHNVLPNY-------FEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML-DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y + + N +L + GE ++GP+GCGK+TLL+LI G E+P GE+ + H V +Y +N A AL KT + + E R+ D L+ + ++L +R V LSGG++ R+A + ++ +L+LDEP + LD Sbjct: 15 YGNTPILNNVSLNVNHGEFLTLLGPSGCGKTTLLRLISGFEQPTQGEIFINGQCVNQLPPQKRDVHTVFQSYALFPHLSVFENVAFALRCKKTSNQEIKE-----RVFDALKLV-----QLELLAERNVKQLSGGQQQRVAIARAIINRPQVLLLDEPLSSLD 167
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_AGGAC (Spermidine/putrescine import ATP-binding protein potA OS=Aggregatibacter actinomycetemcomitans GN=potA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.937e-12 Identity = 49/155 (31.61%), Postives = 79/155 (50.97%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVAEAAEDWRIDD-------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y + NLTI GE I+GP+GCGK+T+L+L+ GLE+ G ++L ++ E+ Q+ AL T+ E VA ++ + ++ L R +M DRK + LSGG++ R+A + +V +L+LDE + LD Sbjct: 20 YGSNTIIKDFNLTINNGEFLTILGPSGCGKTTVLRLLAGLEELDSGNIILDGEDITNVPAEKRHVNTVFQSYALFPHMTIFENVAFGLRMQKVPEAEIKPRVLEAL--RMVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALD 172
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: NODI_BURS3 (Nod factor export ATP-binding protein I OS=Burkholderia sp. (strain 383) GN=nodI PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.937e-12 Identity = 55/159 (34.59%), Postives = 78/159 (49.06%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV-LLGE------HNVLPNYFEQNQAEALDLDKTVLETV----------AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 + D+L+ N + T++ GE ++GPNG GK+T LK+++GL P G + L GE + Q + LD D TV E + A+AA +K LL + + D KV LSGG K RL + +V +LVLDEPT LD Sbjct: 15 FGDKLVVNGLSFTVQAGECYGLLGPNGAGKTTTLKMLLGLTHPDAGTISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGMSAQAAHAL----VKPLLEFAKLE-NKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLD 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: NODI1_RHIME (Nod factor export ATP-binding protein I OS=Rhizobium meliloti GN=nodI PE=3 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 2.937e-12 Identity = 53/161 (32.92%), Postives = 79/161 (49.07%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV-LLG------------EHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y D+ + N + T+ GE ++GPNG GKST+ ++I+G+ P GE+ +LG V+P Q + LDL+ TV E + +R+ I LL + + D +VS LSGG K RL + ++ LL+LDEPT LD Sbjct: 46 YGDKPVINGLSFTVAAGECFGLLGPNGAGKSTITRMILGMTTPGTGEITVLGVPVPSRARLARMRIGVVP------QFDNLDLEFTVRENLLVFGRYFRMSTREIEAVIPSLLEFARLE-NKADARVSDLSGGMKRRLTLARALINDPQLLILDEPTTGLD 199
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: HMUV_RHOP5 (Hemin import ATP-binding protein hmuV OS=Rhodopseudomonas palustris (strain BisA53) GN=hmuV PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.937e-12 Identity = 55/157 (35.03%), Postives = 79/157 (50.32%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGE---HNVLPNYFEQNQA-----EALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFCKFMVKPST--------LLVLDEPTNHLDI 444 L +R +L IE GE AI+GPNG GKSTLL+++ G +P G V L + H+ P +A ++ TV E V A D + L+ + A+ DRK+ LSGGE+ R F + +V+ LL+LDEPT+ LD+ Sbjct: 19 LVDRISLRIEGGELIAIVGPNGAGKSTLLRMLSGDLRPSRGAVRLQQRAVHSYAPRELASRRAMLSQHVSVSFPFTVDEIVQMGAGDRSRAATQSLVDAALHEVGLAEFRDRKLPTLSGGEQQRAHFARVLVQLGCGEAEHGPGLLLLDEPTSSLDL 175
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: HEPA_ANASP (Heterocyst differentiation ATP-binding protein hepA OS=Anabaena sp. (strain PCC 7120) GN=hepA PE=2 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 2.937e-12 Identity = 52/169 (30.77%), Postives = 85/169 (50.30%), Query Frame = 1 Query: 7 EFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN---------QAEALDLDKTVLETVA---EAAEDWRIDDIKGLLGRCNFKADM---LDRKVS----LLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSK 453 +FGY D L+ N LTIERG+ TA++G +G GK+TL LI P G++L+ +V YFE N + + ++ + +A A + I ++ L F +M D K+ LSGG++ R+A + +++ +L+LDE T+ LD S+ Sbjct: 370 DFGYTADNLVLNNITLTIERGKTTALVGASGAGKTTLADLIPRFYDPTEGQILVDGLDV--QYFEINSLRRKMAVVSQDTFIFNTSIRDNIAYGTSGASEAEIREVARLANALQFIEEMPEGFDTKLGDRGVRLSGGQRQRIAIARALLRDPEILILDEATSALDSVSE 536
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: FBPC_ECOLI (Fe(3+) ions import ATP-binding protein fbpC OS=Escherichia coli (strain K12) GN=fbpC PE=3 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 2.937e-12 Identity = 43/148 (29.05%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVAEAAEDWRID--DIKGLLGRCNFKADM---LDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 + + NLTI +G+ ++GP+GCGK+T+L+L+ GLEKP G++ + +V +Q Q+ AL ++ E V + + ++K + D+ DR V +SGG++ R+A + ++ +L+ DEP ++LD Sbjct: 21 VIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDLEGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLD 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC_RICTY (Zinc import ATP-binding protein znuC OS=Rickettsia typhi GN=znuC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.835e-12 Identity = 39/140 (27.86%), Postives = 79/140 (56.43%), Query Frame = 1 Query: 37 NRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 ++ + +++ T +IGPNG GK+T+++LI+GLEKP GE+++ + + Y Q D+ TV + + A + +IK + + + + ++++S LSGG+ ++ ++ L++LDEP LD+ S++ Sbjct: 22 SKVSFIVKKNNITTLIGPNGAGKTTIVRLILGLEKPTSGEIII-DRKLKIGYVPQKFGLTTDIPITVKKFLDLLAPNHFNKNIKEISSFIDLEY-IKEQEISKLSGGQFQKVVLACSIINNPDLMILDEPLQSLDVTSQQ 159
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: WTPC_ARCFU (Molybdate/tungstate import ATP-binding protein wtpC OS=Archaeoglobus fulgidus GN=wtpC PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.835e-12 Identity = 53/159 (33.33%), Postives = 78/159 (49.06%), Query Frame = 1 Query: 19 EDRLLFNRANLTIERG-EKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTV-------------LETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSK 453 E RL R N+ E G + ++GP G GKS L+LI G+ KP GEV L ++ P E+ + D + L V D R+ ++ LG A +LDRK + LSGGE+ R+A + +V LL+LDEP + +D+ +K Sbjct: 8 EKRLGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGI----AHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTK 162 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |