CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: UGPC2_RHIEC (sn-glycerol-3-phosphate import ATP-binding protein ugpC 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ugpC2 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.835e-12 Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN--------QAEALDLDKTVLET---------VAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 +L I+ GE I+GP+GCGKSTLL++I GLE+ GGE+ + V N E Q AL TV E VA+ RI ++ L F LDR+ + LSGG++ R+A + M++ + + DEP ++LD Sbjct: 23 DLEIQSGEFIVILGPSGCGKSTLLRMIAGLEEITGGEIAIDGRVV--NQMEPRERGCAMVFQNYALYPHMTVAENIGYALKVAGVAKTERSRRIAEVAKALSLEPF----LDRRPAALSGGQRQRVAMGRAMIREPKVFLFDEPLSNLD 165
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: SSUB1_PSEAE (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Pseudomonas aeruginosa GN=ssuB1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.835e-12 Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN---QAEALDLDKTVLETVAEAAE-DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 + +R + +L + G+ AI+G +GCGKSTLL+L+ GL++P GE+L G + + Q L K V++ V DWR ++ L R A+ + + LSGG+K R+A + ++ LL+LDEP LD Sbjct: 30 FGEREVLKDIDLLVPAGQFVAIVGRSGCGKSTLLRLLAGLDQPSRGELLAGSAALAEAREDTRLMFQDSRLLPWKRVIDNVGLGLRGDWRAKALQAL--RAVGLAERANEWPAALSGGQKQRVALARALIHEPRLLLLDEPLGALD 173
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: OPPF2_STAAN (Putative oligopeptide transport ATP-binding protein oppF2 OS=Staphylococcus aureus (strain N315) GN=oppF2 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.835e-12 Identity = 48/158 (30.38%), Postives = 84/158 (53.16%), Query Frame = 1 Query: 10 FGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWR-IDD-------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 FGY + ++ N+TI GE I+G +GCGKSTL L++GL KP GE+ L ++ VL + Q+ + + D T+ ++ EA +R + D + L A +L + S +SGG+ R + ++ +L+ DE T++LD+ +++ Sbjct: 9 FGYNKKQMVLQDINITIPDGENVGILGESGCGKSTLASLVLGLFKPVKGEIYLSDNAVLTIF--QHPLTSFNPDWTIETSLKEALYYYRGLTDNTAQDQLLLQHLSTFELNAQLLTKLPSEVSGGQLQRFNVMRSLLAQPRVLICDEITSNLDVIAEQ 164
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: OPPF2_STAAM (Putative oligopeptide transport ATP-binding protein oppF2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=oppF2 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.835e-12 Identity = 48/158 (30.38%), Postives = 84/158 (53.16%), Query Frame = 1 Query: 10 FGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWR-IDD-------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 FGY + ++ N+TI GE I+G +GCGKSTL L++GL KP GE+ L ++ VL + Q+ + + D T+ ++ EA +R + D + L A +L + S +SGG+ R + ++ +L+ DE T++LD+ +++ Sbjct: 9 FGYNKKQMVLQDINITIPDGENVGILGESGCGKSTLASLVLGLFKPVKGEIYLSDNAVLTIF--QHPLTSFNPDWTIETSLKEALYYYRGLTDNTAQDQLLLQHLSTFELNAQLLTKLPSEVSGGQLQRFNVMRSLLAQPRVLICDEITSNLDVIAEQ 164
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: DDPF_ECOLI (Probable D,D-dipeptide transport ATP-binding protein ddpF OS=Escherichia coli (strain K12) GN=ddpF PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.835e-12 Identity = 44/143 (30.77%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 37 NRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAE-------AAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 N +L I RGE I+G +GCGKSTL +L+MG+ +P G+ + + Q+ +L+ V + E ++E R + L + + + LDR SGG++ R+A + + ++VLDEPT+ LDI Sbjct: 33 NGIDLQIRRGETLGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRIITEPLWIAKRSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQPDVIVLDEPTSALDI 175
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: CYSA_ANASP (Sulfate/thiosulfate import ATP-binding protein cysA OS=Anabaena sp. (strain PCC 7120) GN=cysA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.835e-12 Identity = 52/147 (35.37%), Postives = 80/147 (54.42%), Query Frame = 1 Query: 37 NRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLL-GEHNVLPNYFEQN-----QAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML------DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 ++ NL I+ G+ A++GP+G GKSTLL+LI GLEKP G ++L G+ + E+N Q AL TV + +A E + K + GR +++ DR S LSGG++ R+A + + ++L+LDEP LD Sbjct: 19 DQVNLEIQSGKLVALLGPSGSGKSTLLRLIAGLEKPDDGRIILTGKDATNQSVQERNIGFVFQHYALFKHLTVRQNIAFGLEIRKAPANK-VKGRVEQLLELVQLSGLGDRYPSQLSGGQRQRVALARALAVEPSVLLLDEPFGALD 164
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: CBIO2_ENTFA (Cobalt import ATP-binding protein cbiO 2 OS=Enterococcus faecalis GN=cbiO2 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 3.835e-12 Identity = 53/161 (32.92%), Postives = 75/161 (46.58%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQ-------------AEALDLDKTVLETVAEAAEDWRIDD------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 +E R LF+ NLTI+ G TAI+G G GKSTLL+ + L KP G+V +GE + P +N EA ++TV +A +++ + D K +L L LSGG+ R+A + +LVLDEPT LD Sbjct: 18 FEQRALFD-INLTIQDGSYTAIVGHTGSGKSTLLQHLNALVKPTKGQVTIGERVITPETDNKNLKPIRKKVGIVFQFPEAQLFEETVERDIAFGPKNFGVSDEEAKKLAKKMLDLVGLDEKYLQHSPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLD 177
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC_YERE8 (Zinc import ATP-binding protein znuC OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=znuC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12 Identity = 49/146 (33.56%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVA---EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 + R + N +L++ G ++GPNG GKSTL+++++GL P G + + E + Y Q L LD T+ TV+ R DI L R + A +LD+ + LSGGE R+ + ++ LLVLDEPT +D+ Sbjct: 14 FGSRRVLNDISLSLRPGRILTLLGPNGAGKSTLVRVVLGLIAPTSGSI-IREPGLRIGYVPQK----LHLDTTLPLTVSRFMRLKPGVRKADILPALKRVH-AAHLLDQPMQKLSGGENQRVLLARALLNRPQLLVLDEPTQGVDV 153
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YVFR_BACSU (Uncharacterized ABC transporter ATP-binding protein yvfR OS=Bacillus subtilis GN=yvfR PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12 Identity = 49/154 (31.82%), Postives = 80/154 (51.95%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLE---TVAEAAEDWRID-----DIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSK 453 ++ + N + +IE+GE AI+GPNG GK+T++ +I+GL KP GE+ L N +P+ + + + L + + V E E +R +K L+ + L + LSGG+K RL+F + LL+LDEPT +D S+ Sbjct: 15 FQRKTAVNNISFSIEKGEIAAILGPNGAGKTTVVSMILGLLKPSEGEIKL--FNRVPDDQQVREKIGVMLQEVSVMPGLKVDEILELFRSYYPNPLSMKELVSLTALTKEDLKTRAEKLSGGQKRRLSFALALAGNPELLILDEPTVGMDTSSR 166
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: Y3745_BRUSU (Putative ATP-binding protein BRA0745 OS=Brucella suis GN=BRA0745 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12 Identity = 50/152 (32.89%), Postives = 82/152 (53.95%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG--EHNVLP----NYFEQNQAEALDLDKTVLETVA--------EAAED-WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 + +R +L I GE ++GP+GCGKSTLL+++ GLE GG++++G N LP N Q+ AL T E + +AAE ++D +L ++ LDR LSGG++ R+A + +V+ ++ + DEP ++LD Sbjct: 18 VLDRIDLEIHSGEFLVLVGPSGCGKSTLLRMVAGLEPISGGDLVIGGERANELPPQKRNIAMVFQSYALFPHMTARENIGFGPRIRGEKAAETAAKVDHAASILNLHSY----LDRYPRQLSGGQRQRVAMGRAIVREPSVFLFDEPLSNLD 165 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |