CX296608

Overview
NameCX296608
Unique NameCX296608
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length457
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: Y2993_BRUA2 (Putative ATP-binding protein BAB2_0493 OS=Brucella abortus (strain 2308) GN=BAB2_0493 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12
Identity = 50/152 (32.89%), Postives = 82/152 (53.95%), Query Frame = 1
Query:   31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG--EHNVLP----NYFEQNQAEALDLDKTVLETVA--------EAAED-WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441
            + +R +L I  GE   ++GP+GCGKSTLL+++ GLE   GG++++G    N LP    N     Q+ AL    T  E +         +AAE   ++D    +L   ++    LDR    LSGG++ R+A  + +V+  ++ + DEP ++LD
Sbjct:   18 VLDRIDLEIHSGEFLVLVGPSGCGKSTLLRMVAGLEPISGGDLVIGGERANELPPQKRNIAMVFQSYALFPHMTARENIGFGPRIRGEKAAETAAKVDHAASILNLHSY----LDRYPRQLSGGQRQRVAMGRAIVREPSVFLFDEPLSNLD 165          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: Y2787_BRUAB (Putative ATP-binding protein BruAb2_0487 OS=Brucella abortus GN=BruAb2_0487 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12
Identity = 50/152 (32.89%), Postives = 82/152 (53.95%), Query Frame = 1
Query:   31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG--EHNVLP----NYFEQNQAEALDLDKTVLETVA--------EAAED-WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441
            + +R +L I  GE   ++GP+GCGKSTLL+++ GLE   GG++++G    N LP    N     Q+ AL    T  E +         +AAE   ++D    +L   ++    LDR    LSGG++ R+A  + +V+  ++ + DEP ++LD
Sbjct:   18 VLDRIDLEIHSGEFLVLVGPSGCGKSTLLRMVAGLEPISGGDLVIGGERANELPPQKRNIAMVFQSYALFPHMTARENIGFGPRIRGEKAAETAAKVDHAASILNLHSY----LDRYPRQLSGGQRQRVAMGRAIVREPSVFLFDEPLSNLD 165          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_VIBCH (Spermidine/putrescine import ATP-binding protein potA OS=Vibrio cholerae GN=potA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12
Identity = 49/153 (32.03%), Postives = 76/153 (49.67%), Query Frame = 1
Query:   16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVA-----EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441
            ++ + +    NL +  GE   I+GP+GCGK+T+L++I G E    G++LL + +V     EQ       Q+ AL    TV E VA     +      I+       R    A+M  RK   LSGG++ R+A  + +V    +L+LDE  + LD
Sbjct:   27 FDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLDDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALD 179          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: LOLD_SACD2 (Lipoprotein-releasing system ATP-binding protein lolD OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=lolD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12
Identity = 51/162 (31.48%), Postives = 77/162 (47.53%), Query Frame = 1
Query:   46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGE-------------------------HNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456
            NL IE+G+  AI+G +G GKSTLL ++ GL+KP  GEV + E                         H++LP +          L   V +  A+   +  +D + GL  R       LD K + LSGGE+ R+A  + +V     +++DEPT +LD  + E
Sbjct:   29 NLQIEQGQHIAIVGASGSGKSTLLNVLGGLDKPDAGEVWVNEKAFSSLNDNKRGLVRNQELGFVYQFHHLLPEFTALENVMMPCLIAGVKKAQAKQKAEALLDKV-GLSHR-------LDHKPAELSGGERQRVAIARALVNEPACVLMDEPTGNLDTENAE 182          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: FBPC_MANSM (Fe(3+) ions import ATP-binding protein fbpC OS=Mannheimia succiniciproducens (strain MBEL55E) GN=fbpC PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12
Identity = 42/147 (28.57%), Postives = 77/147 (52.38%), Query Frame = 1
Query:   46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTV---------LETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441
            +L I+RG    ++GP+GCGK+T+L+L+ GLE P  G++ +   +V  +  +        Q+ AL    ++         ++ +A+     RI +   L+    F+    DR V  +SGG++ R+A  + +V    +L+ DEP ++LD
Sbjct:   28 DLVIKRGTMVTLLGPSGCGKTTILRLVAGLENPTSGQIFIDGEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLRMQNIAKEERKQRIREALELVDLAGFE----DRFVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLD 170          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: CYSA_CUCSA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Cucumis sativus GN=CYSA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12
Identity = 52/151 (34.44%), Postives = 71/151 (47.02%), Query Frame = 1
Query:   37 NRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQA------EALDLDKTVLETVA----------EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441
            N  +L IE GE  A++GP+GCGK+TLL++I GLE    G VL    +       Q Q        AL    TV E VA            +ED     +  LLG       + DR  + LSGG++ R+A  + +     +L+LDEP   LD
Sbjct:   19 NDVSLHIETGELVALLGPSGCGKTTLLRIIAGLESADNGSVLFAGEDATSVDVRQRQVGFVFQHYALFKHMTVFENVAFGLRVKHRSQRPSEDQIQRKVHDLLGLVQLDW-LADRYPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALD 168          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ATM1_ASPFU (Iron-sulfur clusters transporter atm1, mitochondrial OS=Aspergillus fumigatus GN=atm1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12
Identity = 54/162 (33.33%), Postives = 82/162 (50.62%), Query Frame = 1
Query:   10 FGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ-NQAEALDLDKTVL--ETVAEAAEDWRIDDIKGLLGRCNFKA--DMLDRKV------------SLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441
            FGY  DR +   A+ TI  G+K AI+GP+GCGKST+L+L+      + G +L+ + +V     E   +A  +    T L  +T+A      RID     + +   +A  D L +K+             ++SGGEK RLA  + ++K   LL  DE T+ LD
Sbjct:  463 FGYHPDRPILKNASFTIPAGQKFAIVGPSGCGKSTILRLLFRFYDVQEGRILIDDQDVRDVSLESLRKAIGVVPQDTPLFNDTIAHNIRYGRIDATDEEVHKAAQRARIDALIQKLPEGYQTAVGERGMMISGGEKQRLAISRLILKDPELLFFDEATSALD 624          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: UGPC_RALEJ (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Ralstonia eutropha (strain JMP134) GN=ugpC PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12
Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 1
Query:   46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH-------------NVLPNYFEQNQAEALDLDKTVLET--VAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441
            ++ I  GE   I+GP+GCGKSTLL+++ GLE   GG++ +G+               V  NY         D     L+   +A+A  + R+    G+L      A +LDRK   LSGG++ R+A  + +V+  ++ + DEP ++LD
Sbjct:   24 DMEIADGEFIVIVGPSGCGKSTLLRMVAGLETITGGDIHIGDRVVNNLEPAERDIAMVFQNYALYPHMSVYDNMAYGLKIRGMAKAEIEQRVKHAAGILE----LAPLLDRKPRQLSGGQRQRVAMGRAIVREPSVFLFDEPLSNLD 166          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: UGPC_RALEH (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ugpC PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12
Identity = 49/147 (33.33%), Postives = 78/147 (53.06%), Query Frame = 1
Query:   46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGE---HNVLP----------NYFEQNQAEALDLDKTVLET--VAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441
            ++ I  GE   I+GP+GCGKSTLL+++ GLE   GGE+ +G+   +N+ P          NY         D     L+   +A+A    R++   G+L      A +LDRK   LSGG++ R+A  + +V+   + + DEP ++LD
Sbjct:   24 DMEIADGEFIVIVGPSGCGKSTLLRMVAGLETITGGEIHIGDKVVNNLEPAERDIAMVFQNYALYPHMSVYDNMAYGLKIRGMAKAEIAQRVNHAAGILE----LAPLLDRKPRQLSGGQRQRVAMGRAIVREPAVFLFDEPLSNLD 166          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: SSUB_PSEPF (Aliphatic sulfonates import ATP-binding protein ssuB OS=Pseudomonas fluorescens (strain Pf0-1) GN=ssuB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12
Identity = 45/146 (30.82%), Postives = 73/146 (50.00%), Query Frame = 1
Query:   16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ----NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441
            +  R +    +L I  G+  A++G +GCGKSTLL+L+ GL++P GG++L G   +     +      +A  L   K +         +WR   ++ L       AD  +   + LSGG+K R+A  + ++    LL+LDEP   LD
Sbjct:   24 FGSRQVLRGIDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLDQPTGGDLLAGSAPLTDARDDTRLMFQEARLLPWKKIIDNVGLGLKGNWRAQALQAL--DAVGLADRANEWPAALSGGQKQRVALARALIHQPRLLLLDEPLGALD 167          
The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
Y2993_BRUA25.009e-1232.89Putative ATP-binding protein BAB2_0493 OS=Brucella... [more]
Y2787_BRUAB5.009e-1232.89Putative ATP-binding protein BruAb2_0487 OS=Brucel... [more]
POTA_VIBCH5.009e-1232.03Spermidine/putrescine import ATP-binding protein p... [more]
LOLD_SACD25.009e-1231.48Lipoprotein-releasing system ATP-binding protein l... [more]
FBPC_MANSM5.009e-1228.57Fe(3+) ions import ATP-binding protein fbpC OS=Man... [more]
CYSA_CUCSA5.009e-1234.44Sulfate/thiosulfate import ATP-binding protein cys... [more]
ATM1_ASPFU5.009e-1233.33Iron-sulfur clusters transporter atm1, mitochondri... [more]
UGPC_RALEJ6.542e-1231.97sn-glycerol-3-phosphate import ATP-binding protein... [more]
UGPC_RALEH6.542e-1233.33sn-glycerol-3-phosphate import ATP-binding protein... [more]
SSUB_PSEPF6.542e-1230.82Aliphatic sulfonates import ATP-binding protein ss... [more]

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Properties
Property NameValue
Genbank descriptionC05146G08SK FerrChloL1 Citrus clementina cDNA clone C05146G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bp
CGAGGGGAATTTGGATACGAGGATAGACTTCTGTTTAATCGAGCAAATCT
CACAATTGAAAGGGGAGAGAAAACTGCCATCATTGGCCCAAATGGTTGTG
GTAAGAGTACTTTGCTGAAATTGATAATGGGTTTAGAGAAGCCAAGAGGA
GGTGAAGTTCTGCTTGGTGAGCATAATGTCCTACCAAACTATTTTGAGCA
GAATCAGGCTGAGGCACTTGATTTGGACAAAACAGTACTTGAGACAGTAG
CAGAAGCTGCAGAGGACTGGAGAATTGATGATATAAAGGGCCTCCTTGGT
CGTTGTAATTTCAAAGCTGACATGCTTGATAGAAAGGTTTCCCTTTTGAG
TGGTGGTGAGAAGGCACGTCTTGCATTTTGCAAATTCATGGTAAAACCAT
CAACTCTTCTAGTTTTGGATGAACCAACTAATCACTTGGATATTCCTTCA
AAAGAGA
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