CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: Y2993_BRUA2 (Putative ATP-binding protein BAB2_0493 OS=Brucella abortus (strain 2308) GN=BAB2_0493 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12 Identity = 50/152 (32.89%), Postives = 82/152 (53.95%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG--EHNVLP----NYFEQNQAEALDLDKTVLETVA--------EAAED-WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 + +R +L I GE ++GP+GCGKSTLL+++ GLE GG++++G N LP N Q+ AL T E + +AAE ++D +L ++ LDR LSGG++ R+A + +V+ ++ + DEP ++LD Sbjct: 18 VLDRIDLEIHSGEFLVLVGPSGCGKSTLLRMVAGLEPISGGDLVIGGERANELPPQKRNIAMVFQSYALFPHMTARENIGFGPRIRGEKAAETAAKVDHAASILNLHSY----LDRYPRQLSGGQRQRVAMGRAIVREPSVFLFDEPLSNLD 165
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: Y2787_BRUAB (Putative ATP-binding protein BruAb2_0487 OS=Brucella abortus GN=BruAb2_0487 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12 Identity = 50/152 (32.89%), Postives = 82/152 (53.95%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG--EHNVLP----NYFEQNQAEALDLDKTVLETVA--------EAAED-WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 + +R +L I GE ++GP+GCGKSTLL+++ GLE GG++++G N LP N Q+ AL T E + +AAE ++D +L ++ LDR LSGG++ R+A + +V+ ++ + DEP ++LD Sbjct: 18 VLDRIDLEIHSGEFLVLVGPSGCGKSTLLRMVAGLEPISGGDLVIGGERANELPPQKRNIAMVFQSYALFPHMTARENIGFGPRIRGEKAAETAAKVDHAASILNLHSY----LDRYPRQLSGGQRQRVAMGRAIVREPSVFLFDEPLSNLD 165
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_VIBCH (Spermidine/putrescine import ATP-binding protein potA OS=Vibrio cholerae GN=potA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12 Identity = 49/153 (32.03%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVA-----EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 ++ + + NL + GE I+GP+GCGK+T+L++I G E G++LL + +V EQ Q+ AL TV E VA + I+ R A+M RK LSGG++ R+A + +V +L+LDE + LD Sbjct: 27 FDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLDDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALD 179
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: LOLD_SACD2 (Lipoprotein-releasing system ATP-binding protein lolD OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=lolD PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12 Identity = 51/162 (31.48%), Postives = 77/162 (47.53%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGE-------------------------HNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 NL IE+G+ AI+G +G GKSTLL ++ GL+KP GEV + E H++LP + L V + A+ + +D + GL R LD K + LSGGE+ R+A + +V +++DEPT +LD + E Sbjct: 29 NLQIEQGQHIAIVGASGSGKSTLLNVLGGLDKPDAGEVWVNEKAFSSLNDNKRGLVRNQELGFVYQFHHLLPEFTALENVMMPCLIAGVKKAQAKQKAEALLDKV-GLSHR-------LDHKPAELSGGERQRVAIARALVNEPACVLMDEPTGNLDTENAE 182
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: FBPC_MANSM (Fe(3+) ions import ATP-binding protein fbpC OS=Mannheimia succiniciproducens (strain MBEL55E) GN=fbpC PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12 Identity = 42/147 (28.57%), Postives = 77/147 (52.38%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTV---------LETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 +L I+RG ++GP+GCGK+T+L+L+ GLE P G++ + +V + + Q+ AL ++ ++ +A+ RI + L+ F+ DR V +SGG++ R+A + +V +L+ DEP ++LD Sbjct: 28 DLVIKRGTMVTLLGPSGCGKTTILRLVAGLENPTSGQIFIDGEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLRMQNIAKEERKQRIREALELVDLAGFE----DRFVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLD 170
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: CYSA_CUCSA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Cucumis sativus GN=CYSA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12 Identity = 52/151 (34.44%), Postives = 71/151 (47.02%), Query Frame = 1 Query: 37 NRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQA------EALDLDKTVLETVA----------EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 N +L IE GE A++GP+GCGK+TLL++I GLE G VL + Q Q AL TV E VA +ED + LLG + DR + LSGG++ R+A + + +L+LDEP LD Sbjct: 19 NDVSLHIETGELVALLGPSGCGKTTLLRIIAGLESADNGSVLFAGEDATSVDVRQRQVGFVFQHYALFKHMTVFENVAFGLRVKHRSQRPSEDQIQRKVHDLLGLVQLDW-LADRYPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALD 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ATM1_ASPFU (Iron-sulfur clusters transporter atm1, mitochondrial OS=Aspergillus fumigatus GN=atm1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12 Identity = 54/162 (33.33%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 10 FGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ-NQAEALDLDKTVL--ETVAEAAEDWRIDDIKGLLGRCNFKA--DMLDRKV------------SLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 FGY DR + A+ TI G+K AI+GP+GCGKST+L+L+ + G +L+ + +V E +A + T L +T+A RID + + +A D L +K+ ++SGGEK RLA + ++K LL DE T+ LD Sbjct: 463 FGYHPDRPILKNASFTIPAGQKFAIVGPSGCGKSTILRLLFRFYDVQEGRILIDDQDVRDVSLESLRKAIGVVPQDTPLFNDTIAHNIRYGRIDATDEEVHKAAQRARIDALIQKLPEGYQTAVGERGMMISGGEKQRLAISRLILKDPELLFFDEATSALD 624
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: UGPC_RALEJ (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Ralstonia eutropha (strain JMP134) GN=ugpC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH-------------NVLPNYFEQNQAEALDLDKTVLET--VAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 ++ I GE I+GP+GCGKSTLL+++ GLE GG++ +G+ V NY D L+ +A+A + R+ G+L A +LDRK LSGG++ R+A + +V+ ++ + DEP ++LD Sbjct: 24 DMEIADGEFIVIVGPSGCGKSTLLRMVAGLETITGGDIHIGDRVVNNLEPAERDIAMVFQNYALYPHMSVYDNMAYGLKIRGMAKAEIEQRVKHAAGILE----LAPLLDRKPRQLSGGQRQRVAMGRAIVREPSVFLFDEPLSNLD 166
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: UGPC_RALEH (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ugpC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 49/147 (33.33%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGE---HNVLP----------NYFEQNQAEALDLDKTVLET--VAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 ++ I GE I+GP+GCGKSTLL+++ GLE GGE+ +G+ +N+ P NY D L+ +A+A R++ G+L A +LDRK LSGG++ R+A + +V+ + + DEP ++LD Sbjct: 24 DMEIADGEFIVIVGPSGCGKSTLLRMVAGLETITGGEIHIGDKVVNNLEPAERDIAMVFQNYALYPHMSVYDNMAYGLKIRGMAKAEIAQRVNHAAGILE----LAPLLDRKPRQLSGGQRQRVAMGRAIVREPAVFLFDEPLSNLD 166
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: SSUB_PSEPF (Aliphatic sulfonates import ATP-binding protein ssuB OS=Pseudomonas fluorescens (strain Pf0-1) GN=ssuB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 45/146 (30.82%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ----NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 + R + +L I G+ A++G +GCGKSTLL+L+ GL++P GG++L G + + +A L K + +WR ++ L AD + + LSGG+K R+A + ++ LL+LDEP LD Sbjct: 24 FGSRQVLRGIDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLDQPTGGDLLAGSAPLTDARDDTRLMFQEARLLPWKKIIDNVGLGLKGNWRAQALQAL--DAVGLADRANEWPAALSGGQKQRVALARALIHQPRLLLLDEPLGALD 167 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |