CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: RBSA2_RHILO (Ribose import ATP-binding protein rbsA 2 OS=Rhizobium loti GN=rbsA2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 1 Query: 37 NRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYF------------EQNQAEALDLDKTVLETVAEAAEDWR-----------IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSK 453 N +L + RGE I G G G+S L K I+G ++ G + + VLPN E + EAL L +++L+ A D ++ + L + + KA LD +VS LSGG + ++ +++ + LL+LDEPT +DI +K Sbjct: 273 NDVSLRVRRGEVLGIAGLMGAGRSELAKAIVGYDRRIAGTIAMNGVPVLPNSPHAAIVAGIGFAPEDRKHEALLLFRSILDNAALCVPDKTSSFGFFNRRKAMEIVSPLAAKMSIKAPNLDEQVSKLSGGNQQKVVLARWLARQPMLLILDEPTRGIDIGAK 434
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_PASMU (Spermidine/putrescine import ATP-binding protein potA OS=Pasteurella multocida GN=potA PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 48/153 (31.37%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVAEAAEDWRI--DDIKGLLGRCNFKADMLD---RKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y D+ + NLTI GE I+GP+GCGK+T+L+L+ GLE+ G ++L ++ EQ Q+ AL T+ E VA ++ ++IK + + + K + LSGG++ R+A + +V +L+LDE + LD Sbjct: 20 YGDKTIIENFNLTINNGEFLTILGPSGCGKTTVLRLLAGLEELDSGNIILDGEDITHVPAEQRHVNTVFQSYALFPHMTIFENVAFGLRMQKVPNEEIKPRVLEALRMVQLEEYAYSKPAQLSGGQQQRIAIARAVVNKPKVLLLDESLSALD 172
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_MARAV (Spermidine/putrescine import ATP-binding protein potA OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=potA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 49/162 (30.25%), Postives = 77/162 (47.53%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG---------EHNVLPNYFE-----------QNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 ++ + + + +L I GE ++GP+GCGK+TLL+++ G E P G + LG EH L F+ N A L ++K + + E ED L + D RK LSGG++ R+A + +VK +L+LDEP + LD Sbjct: 15 FDGKKVLDSLDLDIFDGEFITLLGPSGCGKTTLLRMMAGFEHPDDGTIALGDQDLTHTPPEHRPLNTVFQNYALFPHMSVFDNVAYGLKMEKRPKQEIRERVED--------ALAMVQLE-DFARRKPHQLSGGQQQRVAIARAVVKRPKVLLLDEPLSALD 167
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_LEGPH (Spermidine/putrescine import ATP-binding protein potA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=potA PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 48/162 (29.63%), Postives = 78/162 (48.15%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG-------------EHNVLPNY-------FEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y + + N +L + GE ++GP+GCGK+TLL+LI G E+P GE+ + H V +Y +N A AL KT + + + R+ D L+ + +R V LSGG++ R+A + ++ +L+LDEP + LD Sbjct: 15 YGNTPILNNVSLNVNHGEFLTLLGPSGCGKTTLLRLISGFEQPTQGEIFINGQCVNQLPPQKRDVHTVFQSYALFPHLSVFENVAFALRCKKTPNQEIRK-----RVFDALKLVQ----LESLAERNVKQLSGGQQQRVAIARAIINRPQVLLLDEPLSSLD 167
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_LACBA (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=potA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGE---HNVLPNYFEQN---QAEALDLDKTVLETVA-----------EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y D + + NLT+E G+ ++GP+GCGK+T+L+ I G G++L ++V N N Q AL TV E VA E AE R++ L+ AD DR +S LSGG++ R+A + +V +L+LDEP + LD Sbjct: 15 YADNTILSNINLTLESGKFYTLLGPSGCGKTTILRTIAGFTDATTGDILFAGKRINDVPANKRNVNTVFQDYALFPHMTVAENVAFGLTLQKRPKSEIAE--RVNQALRLVQ----LADYGDRAISALSGGQQQRIAIARAIVMQPQVLLLDEPLSALD 167
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_BACCR (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=potA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 51/157 (32.48%), Postives = 81/157 (51.59%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH--NVLPNYFEQN----QAEALDLDKTV---------LETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 + ++++ +L I+ GE I+GP+GCGK+TLL++I G E P G +LL + N LP Y Q AL TV ++ V+ A + R ++ L F+ +RK + LSGG++ R+A + +V +L+LDEP LD Sbjct: 14 FGNQVIIPPLSLDIKEGEFLTILGPSGCGKTTLLRMIAGFETPTKGNLLLDDERINDLPPYKRHMNLVFQHYALFPHMTVEKNICFGMKMQKVSAAEQKERAEEAMRLTQLLEFR----NRKPAKLSGGQQQRVAIARAIVNNPRVLLLDEPLGALD 166
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: MDL1_CANAL (ATP-dependent permease MDL1 OS=Candida albicans GN=MDL1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 49/160 (30.63%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP---NYFEQN----QAEALDLDKTVLETV---AEAAEDWRIDDIKGLLGRCNF---KADMLDRKV-----SLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 +F NL I++GE ++GP+G GKST+ +L++ P G + +G+ + N++ Q E L T+ E + E A D I++ L NF D LD K+ + LSGG+K R++ + +++ +L+LDE T+ LD S+E Sbjct: 457 IFKDLNLHIKQGENVCLVGPSGSGKSTVSQLLLRFYDPEKGTIQIGDDVITDLNLNHYRSKLGYVQQEPLLFSGTIKENILFGKEDATDEEINNALNLSYASNFVRHLPDGLDTKIGASNSTQLSGGQKQRVSLARTLIRDPKILILDEATSALDSVSEE 616
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: FBPC_VIBCH (Fe(3+) ions import ATP-binding protein fbpC OS=Vibrio cholerae GN=fbpC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 42/143 (29.37%), Postives = 79/143 (55.24%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVAEAAEDWRI--DDIKGLLGRCNFKAD---MLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 +L I++G ++GP+GCGK+T+L+L+ GLEKP G++ + +V +Q Q+ AL ++ E VA + ++ ++++ + D M +R V +SGG++ R+A + +V +L+ DEP ++LD Sbjct: 26 DLEIKKGSLVTLLGPSGCGKTTVLRLVAGLEKPTSGQIFIDGEDVTERSIQQRDICMVFQSYALFPHMSLYENVAYGLKMLKLPSEEVRQRVDEALKIVDLEGMGERYVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLD 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: FBPC_ACTPL (Fe(3+) ions import ATP-binding protein fbpC OS=Actinobacillus pleuropneumoniae GN=fbpC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 43/149 (28.86%), Postives = 78/149 (52.35%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVA------EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 + + +L I+RG ++GP+GCGK+T+L+L+ GLE P G++ + +V + + Q+ AL ++ + V + + R +K L + A DR V +SGG++ R+A + +V +L+LDEP ++LD Sbjct: 20 VIDNLDLVIKRGTMVTLLGPSGCGKTTVLRLVAGLENPTSGQIFIDGEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLRMQGVSNEERKQRVKEALELVDL-AGFADRFVDQISGGQQQRVALARALVLKPKVLILDEPLSNLD 167
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: FBPC1_HAEIN (Fe(3+) ions import ATP-binding protein fbpC 1 OS=Haemophilus influenzae GN=fbpC1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 43/150 (28.67%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 28 LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVAEA------AEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 ++ + +LTI+RG ++GP+GCGK+T+L+L+ GLE P G++ + +V + + Q+ AL ++ + V ++ R +K L + A DR V +SGG++ R+A + +V +L+ DEP ++LD Sbjct: 20 VVIDNLDLTIKRGTMVTLLGPSGCGKTTVLRLVAGLENPTSGQIFIDGEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLKMQGIGKEERAQRVKEALELVDL-AGFEDRFVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLD 168 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |