CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: SSUB_YERPE (Aliphatic sulfonates import ATP-binding protein ssuB OS=Yersinia pestis GN=ssuB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11 Identity = 48/148 (32.43%), Postives = 73/148 (49.32%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ------NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y +R + + L I G+ A++G +GCGKSTLL+L+ GLE G +L G N L ++ + +A L K + WR D+ +L AD + + LSGG+K R+A + ++ LL+LDEP LD Sbjct: 22 YGNRTVLDNLQLRITAGQFVAVVGRSGCGKSTLLRLLAGLEAASDGTLLSG--NALLSHAKDETRLMFQEARLLPWKKVIDNVGLGLRGHWR-DEALQVLDTVGL-ADRANEWPAALSGGQKQRVALARALIHRPRLLLLDEPLGALD 165
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: SSUB_YERPA (Aliphatic sulfonates import ATP-binding protein ssuB OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ssuB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11 Identity = 48/148 (32.43%), Postives = 73/148 (49.32%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ------NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y +R + + L I G+ A++G +GCGKSTLL+L+ GLE G +L G N L ++ + +A L K + WR D+ +L AD + + LSGG+K R+A + ++ LL+LDEP LD Sbjct: 22 YGNRTVLDNLQLRITAGQFVAVVGRSGCGKSTLLRLLAGLEAASDGTLLSG--NALLSHAKDETRLMFQEARLLPWKKVIDNVGLGLRGHWR-DEALQVLDTVGL-ADRANEWPAALSGGQKQRVALARALIHRPRLLLLDEPLGALD 165
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: SSUB_PSEE4 (Aliphatic sulfonates import ATP-binding protein ssuB OS=Pseudomonas entomophila (strain L48) GN=ssuB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11 Identity = 46/146 (31.51%), Postives = 72/146 (49.32%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ----NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 + R + +L I G+ AI+G +GCGKSTLL+L+ GL++P GGE+L G + + A L K + + +WR ++ L A+ + LSGG+K R+A + ++ LL+LDEP LD Sbjct: 26 FGQREVLRGVDLHIPAGQFVAIVGRSGCGKSTLLRLLAGLDQPSGGELLAGAAPLAEAREDTRLMFQDARLLPWKKVIDNVGLGLSGNWRPRALEAL--DAVGLAERAHEWPAALSGGQKQRVALARALIHQPRLLLLDEPLGALD 169
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: SSUB1_BURXL (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Burkholderia xenovorans (strain LB400) GN=ssuB1 PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11 Identity = 52/147 (35.37%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGG--EVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRK---VSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y +R + + +L+IERG AI+G +GCGKSTLL+L+ GLEK G E E L A L K+VL+ V +D + +L + +L+R + LSGG++ R+A + +V LL+LDEP LD Sbjct: 89 YGEREVLSGFDLSIERGSFVAIVGRSGCGKSTLLRLVAGLEKATSGVLEKRNEEGGPLDTRIMFQDARLLPW-KSVLQNVMLGLGRSAREDARAVLA----EVGLLERANDWPAQLSGGQRQRVALARALVHRPQLLLLDEPLGALD 230
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_NITEC (Spermidine/putrescine import ATP-binding protein potA OS=Nitrosomonas eutropha (strain C91) GN=potA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11 Identity = 47/158 (29.75%), Postives = 82/158 (51.90%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVAEAAEDWRI--DDIKGLLGRCNFKADM---LDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 + D + +L+I+ GE ++GP+GCGK+TLL++I G + P G++LL ++ E+ Q+ AL TV + VA + ++ +IK + + + + R LSGG+K R+AF + ++ LL++DEP LD +E Sbjct: 13 FGDFTAVDNVSLSIQAGEFFTLLGPSGCGKTTLLRMIAGFDVPDSGQILLDGQDIANTPPEKRPIHTVFQSYALFPHMTVADNVAFPLKMSKVAPAEIKKRMEKALEEVQLSRFTHRFPHELSGGQKQRVAFARGLINRPRLLLMDEPLGALDAKLRE 170
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_HAHCH (Spermidine/putrescine import ATP-binding protein potA OS=Hahella chejuensis (strain KCTC 2396) GN=potA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11 Identity = 49/144 (34.03%), Postives = 74/144 (51.39%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVAEAAEDWRI------DDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 NL+IE GE I+GP+GCGK+T+L+LI G E G ++L +V E+ Q+ AL TV + VA + ++ + +K L +D RK LSGG+K R+A + +V +L+LDE + LD Sbjct: 26 NLSIEDGEFFTILGPSGCGKTTVLRLIAGFEGADEGRIMLNGQDVSKLSAEKRPVNTVFQSYALFPHMTVFDNVAFGLKMAKVSKPEIAERVKEALATVRL-SDFATRKPHQLSGGQKQRVAIARAVVNRPKVLLLDESLSALD 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_CHRVO (Spermidine/putrescine import ATP-binding protein potA OS=Chromobacterium violaceum GN=potA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11 Identity = 49/158 (31.01%), Postives = 79/158 (50.00%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML-----DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 + D N +L++E GE + GP+GCGK+TLL+++ G E+P G++LL ++ E+ Q+ AL TV E +A + + D K D+ DR +SGG++ R+A + +V LL+LDEP + LD +E Sbjct: 13 FGDYTAVNDVSLSVEAGEFFTLPGPSGCGKTTLLRMLAGFEQPDAGQILLDGQDMSQVAPEKRPVHTVFQSYALFPHMTVRENIAFPLKMAKWDKRKIAAQVDELLEDVRLTQFGDRYPHEMSGGQRQRVAIARALVDRPRLLLLDEPLSALDAKLRE 170
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: NODI_BURPS (Nod factor export ATP-binding protein I OS=Burkholderia pseudomallei GN=nodI PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11 Identity = 50/155 (32.26%), Postives = 76/155 (49.03%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV-LLGE------HNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y+D+L+ + + ++ GE ++GPNG GK+T LK+++G+ P G + L GE + Q + LD D TV E + A + + + LL ++ D KV LSGG K RL + +V +LVLDEPT LD Sbjct: 15 YDDKLVVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLES-KADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLD 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: NODI_BURP1 (Nod factor export ATP-binding protein I OS=Burkholderia pseudomallei (strain 1710b) GN=nodI PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11 Identity = 50/155 (32.26%), Postives = 76/155 (49.03%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV-LLGE------HNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y+D+L+ + + ++ GE ++GPNG GK+T LK+++G+ P G + L GE + Q + LD D TV E + A + + + LL ++ D KV LSGG K RL + +V +LVLDEPT LD Sbjct: 15 YDDKLVVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLES-KADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLD 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: NODI_BURMA (Nod factor export ATP-binding protein I OS=Burkholderia mallei GN=nodI PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11 Identity = 50/155 (32.26%), Postives = 76/155 (49.03%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV-LLGE------HNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y+D+L+ + + ++ GE ++GPNG GK+T LK+++G+ P G + L GE + Q + LD D TV E + A + + + LL ++ D KV LSGG K RL + +V +LVLDEPT LD Sbjct: 15 YDDKLVVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLES-KADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLD 168 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |