CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: NODI_BURCA (Nod factor export ATP-binding protein I OS=Burkholderia cenocepacia (strain AU 1054) GN=nodI PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11 Identity = 54/159 (33.96%), Postives = 77/159 (48.43%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV-LLGE------HNVLPNYFEQNQAEALDLDKTVLETV----------AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y D+L+ N + +++ GE ++GPNG GK+T LK+++GL P G + L GE + Q + LD D TV E + A+AA + LL + + D KV LSGG K RL + +V +LVLDEPT LD Sbjct: 15 YGDKLVVNGLSFSVKVGECYGLLGPNGAGKTTTLKMLLGLAHPDAGTISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFSRYFGMSAQAARAL----VAPLLEFAKLE-NKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLD 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: FBPC_PHOLL (Fe(3+) ions import ATP-binding protein fbpC OS=Photorhabdus luminescens subsp. laumondii GN=fbpC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11 Identity = 44/159 (27.67%), Postives = 81/159 (50.94%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETV-----------AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 + + + + L+I +G ++GP+GCGK+T+L+L+ GLEKP G++ + +V +Q Q+ AL ++ E + AE E R+ + L+ F+ DR V +SGG++ R+A + ++ +L+ DEP ++LD Sbjct: 16 FGNNTVIDNLELSIPQGHMVTLLGPSGCGKTTVLRLVAGLEKPSAGKIFIDGEDVTDRSIQQRDICMVFQSYALFPHMSLGENIGYGLKMLGQPKAEIRE--RVKEALELVDLGGFE----DRYVDQISGGQQQRVALARALILKPKVLLFDEPLSNLD 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: Y1051_HAEIN (Uncharacterized ABC transporter ATP-binding protein HI1051 OS=Haemophilus influenzae GN=HI1051 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.241e-11 Identity = 54/168 (32.14%), Postives = 84/168 (50.00%), Query Frame = 1 Query: 10 FGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFE--QNQAEALDLDKTVL-----------------ETVAEAAEDWRIDDIKGLL----GRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 F Y+ + L N NLTI+ GEK +IG +G GKST++ L++ + + GE+ + NVL E + Q + D ++L E + AAE D L GR + A + +R V LSGG++ R+A + M+K + +L+LDE T+ LD Sbjct: 371 FAYDPTKPLLNHFNLTIKPGEKVGLIGRSGAGKSTIVNLLLRFYEAQQGEITIDGQNVLNVQQESLRRQIGLVTQDTSLLHRSVRDNIIYGRPNATDEEMVLAAERAEAADFIPFLSDSQGRKGYDAHVGERGVK-LSGGQRQRIAIARVMLKDAPILLLDEATSALD 537
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: UGPC_RALSO (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Ralstonia solanacearum GN=ugpC PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.241e-11 Identity = 51/151 (33.77%), Postives = 78/151 (51.66%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAE--------ALDLDKTVLETVAEAAEDWRIDDIKGL-----LGRCNFKA------DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 ++ I GE I+GP+GCGKSTLL+++ GLE GGEV +G+ V N E + + AL TV + +A + I+GL L R A +L+RK LSGG++ R+A + +V+ + + DEP ++LD Sbjct: 23 DMEIGDGEFIVIVGPSGCGKSTLLRMVAGLEAITGGEVWIGDRVV--NELEPAERDIAMVFQNYALYPHMTVFDNMAYGLK------IRGLPKSEILARVQQAAGILELGKLLERKPRQLSGGQRQRVAMGRAIVREPAVFLFDEPLSNLD 165
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: THIQ_ERWCT (Thiamine import ATP-binding protein thiQ OS=Erwinia carotovora subsp. atroseptica GN=thiQ PE=3 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 4.241e-11 Identity = 50/153 (32.68%), Postives = 74/153 (48.37%), Query Frame = 1 Query: 40 RANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGE-------------------VLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 R + ++ GE+ AI+GP+G GKSTLL L+ G GE +L E+N+ P + Q AL L + A+ A +I D GL D+LDR S +SGG++ R A + +V+ +L+LDEP + LD Sbjct: 17 RFDFHVKPGERIAILGPSGAGKSTLLNLVAGFLMADSGELRLNGESHRETSPAKRPVSILFQENNLFP-HLTIGQNIALGLHPGLRLNAAQRATLQQIADRVGL-------TDLLDRLPSQVSGGQRQRAALARCLVRHQPILLLDEPFSALD 161
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: SKFE_BACSU (SkfA peptide export ATP-binding protein skfE OS=Bacillus subtilis GN=skfE PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.241e-11 Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRI---------DDIKGLLGRCNFKADMLDRKVSLLSG----GEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 + +I+RGE A++GPNG GK+T ++ + GL KP G++L+ P + AL D+ L AAE + D+K + K L+ K + L G G+K R+ +V+ + L +LDEPT LDIPSK+ Sbjct: 23 SFSIQRGEIVALLGPNGAGKTTTIRCLTGLYKPDKGDILI--EGSPPGDINVQKKVALIPDQPYLYPALTAAEHIQFRARGYHPGKKDVKERVYHA-LKEVHLEEKANQLCGQLSRGQKQRVVLAGAIVQDALLYILDEPTVGLDIPSKQ 169
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_THEFY (Spermidine/putrescine import ATP-binding protein potA OS=Thermobifida fusca (strain YX) GN=potA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.241e-11 Identity = 48/148 (32.43%), Postives = 80/148 (54.05%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---PNYFEQN---QAEALDLDKTVLETVAEAAEDWRID--DIKGLLGRCNFKADMLDR---KVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 +L I +GE +++GP+GCGK+T +++I G E+P G V L +V PN + N Q+ AL TV E VA + ++ +I+ + ++ DR K LSGG++ R+A + +V + L+LDEP LD+ ++ Sbjct: 49 DLEIRQGEFFSLLGPSGCGKTTTMRMIAGFEEPTSGVVRLSGKDVTGVPPNRRDVNMVFQSYALFPHMTVAENVAFGLKRKKVPAAEIRTRVAEMLELVELGDRAKYKPRQLSGGQQQRVALARALVNRPSALLLDEPLGALDLKLRQ 196
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_PSEAB (Spermidine/putrescine import ATP-binding protein potA OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=potA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.241e-11 Identity = 49/167 (29.34%), Postives = 80/167 (47.90%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG-------------EHNVLPNY-------FEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 + D + +LTI GE ++GP+GCGK+TLL+++ G ++P GE+ L H V +Y QN A L + V ++ +A + + D++ AD R + LSGG++ R+A + +V LL+LDEP + LD +E Sbjct: 15 FGDFTAVDNVSLTINTGEFFTLLGPSGCGKTTLLRMLAGFDQPDSGEIRLNGQDLAGVEPEKRPVHTVFQSYALFPHMSVAQNIAFPLKM-AGVAKSEIDARVEQALKDVR--------LADKGGRMPTQLSGGQRQRVAIARALVNRPRLLLLDEPLSALDAKLRE 172
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_NITEU (Spermidine/putrescine import ATP-binding protein potA OS=Nitrosomonas europaea GN=potA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.241e-11 Identity = 48/148 (32.43%), Postives = 77/148 (52.03%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVAEAAE--DWRIDDIKGLLGRCNFKADM---LDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 NL+IE GE ++GP+GCGK+TLL++I G + P G++LL ++ E+ Q+ AL TV + VA + +IK + + + + R LSGG+K R+AF + ++ LL++DEP LD +E Sbjct: 23 NLSIEAGELFTLLGPSGCGKTTLLRMIAGFDVPDSGQILLDGQDIANTPPEKRPIHTVFQSYALFPHMTVADNVAFPLKMSGKTPAEIKKRVEKALEEVQLSRFTHRFPHELSGGQKQRVAFARGLINRPRLLLMDEPLGALDAKLRE 170
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_HAEDU (Spermidine/putrescine import ATP-binding protein potA OS=Haemophilus ducreyi GN=potA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.241e-11 Identity = 48/154 (31.17%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVAEAAEDWRIDD------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y D+ + NLTI GE I+GP+GCGK+T L+LI G E G ++L +V E+ Q+ AL T+ E VA ++ + + L + D ++K + LSGG++ R+A + +V +L+LDE + LD Sbjct: 19 YGDKTILKDLNLTINDGEFLTILGPSGCGKTTALRLIAGFEDLTEGSIILDGQDVSNVSAEKRPVNTVFQSYALFPHMTIFENVAFGLRMQKVPNEQITPRVMEALRMVRLE-DRAEQKPAQLSGGQQQRIAIARAVVNKPKVLLLDESLSALD 171 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |