CX296608

Overview
NameCX296608
Unique NameCX296608
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length457
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: HMUV_BRAJA (Hemin import ATP-binding protein hmuV OS=Bradyrhizobium japonicum GN=hmuV PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.538e-11
Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 1
Query:   31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV---LPNYFEQNQAEA-----LDLDKTVLETVAEAAEDWR-------IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST--------LLVLDEPTNHLDI 444
            L +   LT+  GE  AIIGPNG GKSTLL+L+ G  +P  GEV L + ++    P      +A       +    TV E V   A D         +D     +G  +F+    +R++  LSGGE+ R  F + +V+ +         LL+LDEPT+ LD+
Sbjct:   19 LLDGVGLTVAAGEMVAIIGPNGAGKSTLLRLLSGDLRPSQGEVWLKQRDIGSYTPRELAARRAMLSQHINVTFPFTVEEIVLMGAGDRSAREAGRLVDAALDEVGLAHFR----ERQLPTLSGGEQQRAHFARVLVQLACGEAEHGPGLLLLDEPTSSLDL 175          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: FBPC_BRUSU (Fe(3+) ions import ATP-binding protein fbpC OS=Brucella suis GN=fbpC PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.538e-11
Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 1
Query:   46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV--LP----NYFEQNQAEALDLDKTVLETVAEAAED---------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441
            +LT+E G    ++GP+GCGK+T L+L+ GLE P  G +L+G  +V  LP    +     Q+ AL    T LE VA   E           R ++   L+G       M  R  + LSGG++ R+A  + +V    +L+LDEP ++LD
Sbjct:   28 SLTVEPGTLVTLLGPSGCGKTTTLRLLAGLEHPTSGRILVGGKDVTNLPANERDVSMVFQSYALFPHMTSLENVAYGLESSGFKKNEARERAEEGLKLVG----LGGMGHRLPAELSGGQQQRVAVARALVLEPQVLLLDEPLSNLD 170          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: CYSA_PSEAE (Sulfate/thiosulfate import ATP-binding protein cysA OS=Pseudomonas aeruginosa GN=cysA PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.538e-11
Identity = 50/152 (32.89%), Postives = 78/152 (51.32%), Query Frame = 1
Query:   46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVL-----LGEHNVLP-NYFEQNQAEALDLDKTVLETVA-------------EAAEDWRIDDIKGLLGRCNFKADML-DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441
            NL I+ GE  A++GP+GCGK+TLL++I GLE P  G ++     + +H+V   N     Q  AL    TV + VA             E+A   ++ ++  ++     + D L DR    LSGG++ R+A  + +     +L+LDEP   LD
Sbjct:   22 NLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDAGNIVFHGEDVSQHDVRDRNVGFVFQHYALFRHMTVFDNVAFGLRMKPKGERPGESAIKAKVHELLNMV-----QLDWLADRYPEQLSGGQRQRIALARALAVEPKILLLDEPFGALD 168          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC_VIBVY (Zinc import ATP-binding protein znuC OS=Vibrio vulnificus (strain YJ016) GN=znuC PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.233e-11
Identity = 43/146 (29.45%), Postives = 79/146 (54.11%), Query Frame = 1
Query:   16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH---NVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444
            ++D+ + +  +L + +G+ T +IGPNG GKSTL+K+I+GL KP  G+V          +P   + N    L++ +  L    + ++   ++ ++ +     +K++M       LSGGE  R+   + +++   LLVLDEP   +DI
Sbjct:   14 FDDKKVLDSISLDLHKGKITTLIGPNGAGKSTLVKIIIGLLKPTSGQVQRQAKLTIGYVPQKLKLNDTLPLNVIR-FLNLSGKYSQQETMEALRLVGAEHLYKSNM-----HKLSGGETQRVLLARALLQRPDLLVLDEPAQGVDI 153          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC_VIBVU (Zinc import ATP-binding protein znuC OS=Vibrio vulnificus GN=znuC PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.233e-11
Identity = 43/146 (29.45%), Postives = 79/146 (54.11%), Query Frame = 1
Query:   16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH---NVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444
            ++D+ + +  +L + +G+ T +IGPNG GKSTL+K+I+GL KP  G+V          +P   + N    L++ +  L    + ++   ++ ++ +     +K++M       LSGGE  R+   + +++   LLVLDEP   +DI
Sbjct:   14 FDDKKVLDSISLDLHKGKITTLIGPNGAGKSTLVKIIIGLLKPTSGQVQRQAKLTIGYVPQKLKLNDTLPLNVIR-FLNLSGKYSQQETMEALRLVGAEHLYKSNM-----HKLSGGETQRVLLARALLQRPDLLVLDEPAQGVDI 153          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC_ROSDO (Zinc import ATP-binding protein znuC OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=znuC PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.233e-11
Identity = 50/148 (33.78%), Postives = 73/148 (49.32%), Query Frame = 1
Query:   16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAE------AAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441
            Y  R + +R +L+I  GE   I+GPNG GK++LL+ I+G  KP  G V  G   V   Y  Q     L +D+T+  TVA        A +  ID      G      D+   +++ LSGG+  R+   + ++    LL+LDE T  LD
Sbjct:   13 YGARTVLSRVSLSIAPGEIVTIVGPNGSGKTSLLRAIIGAVKPFQGRVTRGA-GVTLGYVPQK----LHIDETLPMTVARFLRLPGGASEAEIDQALAQAG----VRDLSGSQLAQLSGGQFQRVMLARALIGKPDLLLLDEATQGLD 151          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC1_VIBF1 (Zinc import ATP-binding protein znuC 1 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=znuC1 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.233e-11
Identity = 42/146 (28.77%), Postives = 75/146 (51.37%), Query Frame = 1
Query:   16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH---NVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444
            ++DR + +  +L+IE  +   +IGPNG GKSTL+K I+GL+KP  G +   +      +P     N +  L +    L+   + ++   +  +K +         +L+  +  LSGGE  R+   + +++   LLVLDEP   +D+
Sbjct:   14 FDDRHVIDNVSLSIESNKIITLIGPNGAGKSTLVKTILGLQKPTSGTIKKEKKLRIGYVPQKLHLNDSLPLSV-HGFLKLAGKYSQQEHLSALKLVEAE-----HLLNSNMHKLSGGESQRVLLARALLQRPDLLVLDEPAQGVDV 153          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YXDL_BACSU (ABC transporter ATP-binding protein yxdL OS=Bacillus subtilis GN=yxdL PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 7.233e-11
Identity = 41/165 (24.85%), Postives = 85/165 (51.52%), Query Frame = 1
Query:    1 RGEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHN------VLPNYFEQNQAEALDLDKTVLETVA------------EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441
            +G+  Y+      + + +IE GE TA++GP+G GK+TLL +I  +++P  G++L+   N          +F + Q   +  D  +L+T+             + A     + + G+  +   + ++L+++   +SGG++ R A  + ++   +L++ DEPT +LD
Sbjct:   15 KGQVSYQ---ALKQISFSIEEGEFTAVMGPSGSGKTTLLNIISTIDRPDSGDILINGENPHRLKRTKLAHFRRKQLGFVFQDFNLLDTLTIGENIMLPLTLEKEAPSVMEEKLHGIAAKLGIE-NLLNKRTFEVSGGQRQRAAIARAVIHKPSLILADEPTGNLD 175          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: Y1470_HAEIN (Uncharacterized ABC transporter ATP-binding protein HI1470 OS=Haemophilus influenzae GN=HI1470 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.233e-11
Identity = 44/158 (27.85%), Postives = 84/158 (53.16%), Query Frame = 1
Query:    4 GEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH-NVLPNYFEQNQA-EALDL----DKTVLETVAE-AAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456
            G +   +  LF + N  + +G+  A++G NGCGKSTLL L++G+ +P  G++ + +    +P +F    A   LD+      T + T A+  + D+++      L   N    +  R+ + LSGG++  +   + +     L++LDEPT+ LD+ +++
Sbjct:   11 GFYYQAENFLFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLGIHRPIQGKIEVYQSIGFVPQFFSSPFAYSVLDIVLMGRSTHINTFAKPKSHDYQV--AMQALDYLNL-THLAKREFTSLSGGQRQLILIARAIASECKLILLDEPTSALDLANQD 165          
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: Y020_ONYPE (Putative ABC transporter ATP-binding protein PAM_020 OS=Onion yellows phytoplasma GN=PAM_020 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.233e-11
Identity = 49/154 (31.82%), Postives = 75/154 (48.70%), Query Frame = 1
Query:   31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDL----------DKTVLETVAEA--AEDWRIDDIK----GLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444
            + N  +L +  G+  +I+G NG GKSTL K+I G   P+ G +LL   + L +   Q ++E +             KTV E VA     +   + +IK     +L  CN     ++R +S LS G+K RL     +V    +L+LDEPT   D+
Sbjct:  333 ILNDISLDLFPGKMISIVGKNGSGKSTLAKVICGFSNPQTGTILLNNQD-LTHLSLQQRSEKIGFVMQNPHHMISQKTVFEEVALGLLGKQLSLTEIKTKVHAILKTCNLDC-FVNRPISALSFGQKKRLTIASILVMQPQILILDEPTIGQDL 484          
The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
HMUV_BRAJA5.538e-1133.54Hemin import ATP-binding protein hmuV OS=Bradyrhiz... [more]
FBPC_BRUSU5.538e-1134.69Fe(3+) ions import ATP-binding protein fbpC OS=Bru... [more]
CYSA_PSEAE5.538e-1132.89Sulfate/thiosulfate import ATP-binding protein cys... [more]
ZNUC_VIBVY7.233e-1129.45Zinc import ATP-binding protein znuC OS=Vibrio vul... [more]
ZNUC_VIBVU7.233e-1129.45Zinc import ATP-binding protein znuC OS=Vibrio vul... [more]
ZNUC_ROSDO7.233e-1133.78Zinc import ATP-binding protein znuC OS=Roseobacte... [more]
ZNUC1_VIBF17.233e-1128.77Zinc import ATP-binding protein znuC 1 OS=Vibrio f... [more]
YXDL_BACSU7.233e-1124.85ABC transporter ATP-binding protein yxdL OS=Bacill... [more]
Y1470_HAEIN7.233e-1127.85Uncharacterized ABC transporter ATP-binding protei... [more]
Y020_ONYPE7.233e-1131.82Putative ABC transporter ATP-binding protein PAM_0... [more]

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Properties
Property NameValue
Genbank descriptionC05146G08SK FerrChloL1 Citrus clementina cDNA clone C05146G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bp
CGAGGGGAATTTGGATACGAGGATAGACTTCTGTTTAATCGAGCAAATCT
CACAATTGAAAGGGGAGAGAAAACTGCCATCATTGGCCCAAATGGTTGTG
GTAAGAGTACTTTGCTGAAATTGATAATGGGTTTAGAGAAGCCAAGAGGA
GGTGAAGTTCTGCTTGGTGAGCATAATGTCCTACCAAACTATTTTGAGCA
GAATCAGGCTGAGGCACTTGATTTGGACAAAACAGTACTTGAGACAGTAG
CAGAAGCTGCAGAGGACTGGAGAATTGATGATATAAAGGGCCTCCTTGGT
CGTTGTAATTTCAAAGCTGACATGCTTGATAGAAAGGTTTCCCTTTTGAG
TGGTGGTGAGAAGGCACGTCTTGCATTTTGCAAATTCATGGTAAAACCAT
CAACTCTTCTAGTTTTGGATGAACCAACTAATCACTTGGATATTCCTTCA
AAAGAGA
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