CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: AB3F_ARATH (ABC transporter F family member 3 OS=Arabidopsis thaliana GN=ABCF3 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.032e-17 Identity = 55/150 (36.67%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 10 FGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 FGY LLF N I+ + A++GPNG GKST+LKLI G +P G V V F Q+ + LDL L + ++ LG ++ + + LSGG+K+R+AF K K LL+LDEP+NHLD+ + E Sbjct: 511 FGYPGGPLLFRNLNFGIDLDSRIAMVGPNGIGKSTILKLISGDLQPSSGTVFRSA-KVRVAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRSHLGSLGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHLLLLDEPSNHLDLDAVE 659
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YFMR_BACSU (Uncharacterized ABC transporter ATP-binding protein yfmR OS=Bacillus subtilis GN=yfmR PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 5.172e-17 Identity = 53/147 (36.05%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAE-----DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y+ R+L +R N + GE+ IIGPNG GK+TLL + G P GG++ +G+ V Y+ Q+ +E ++ + V++ + E AE D + + +L R F M + LSGGEK RL + +++ +L LDEPTN LD Sbjct: 328 YDGRMLVDRFNELVIPGERIGIIGPNGIGKTTLLNALAGRHTPDGGDITIGQ-TVRIGYYTQDHSE-MNGELKVIDYIKETAEVVKTADGDMITAEQMLERFLFPRSMQQTYIRKLSGGEKRRLYLLQVLMQEPNVLFLDEPTNDLD 472
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ABCF2_DICDI (ABC transporter F family member 2 OS=Dictyostelium discoideum GN=abcF2 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.755e-17 Identity = 54/151 (35.76%), Postives = 78/151 (51.66%), Query Frame = 1 Query: 13 GYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVA-------EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 G E +L+ +L I+ + A++GPNG GKSTLLKL++G P G + H + Y Q+ E LDL T L+ V + E+WR + +GR + +S G K+RL FC ++ LL+LDEPTNHLD+ Sbjct: 375 GKEADVLYRNLDLAIDLDSRIALVGPNGAGKSTLLKLMVGQISPTQGFIKKHSHLKMARY-HQHAHEVLDLTATPLDFVRSKFAHMNKDTEEWRRE-----IGRFGVTGKAQTEAIGCMSDGIKSRLIFCLMALENPHLLLLDEPTNHLDM 519
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ARB1_YEAST (ABC transporter ATP-binding protein ARB1 OS=Saccharomyces cerevisiae GN=ARB1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.718e-16 Identity = 50/144 (34.72%), Postives = 82/144 (56.94%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETV----AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPS 450 L+ N ++ + A++GPNG GKSTLLK++ G P+ G V H L Y + +Q + LDL K+ LE V + ++D++ +G LGR + +++ LS G+++R+ F ++ +L+LDEPTN LDIP+ Sbjct: 410 LYEHLNFGVDMDSRIALVGPNGVGKSTLLKIMTGELTPQSGRVSRHTHVKLGVYSQHSQ-DQLDLTKSALEFVRDKYSNISQDFQF--WRGQLGRYGLTGEGQTVQMATLSEGQRSRVVFALLALEQPNVLLLDEPTNGLDIPT 550
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC_RICBR (Zinc import ATP-binding protein znuC OS=Rickettsia bellii (strain RML369-C) GN=znuC PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 9.754e-16 Identity = 45/147 (30.61%), Postives = 85/147 (57.82%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 + ++L N + T+++ T +IGPNG GK+T+++L++GLEKP GE+++ + + Y Q + DL TV + + A + +DIK + + + + D+K+S LSGG+ ++ ++ L++LDEP LD+ S++ Sbjct: 15 FGNKLPINNVSFTVKKNNITTLIGPNGAGKTTIVRLMLGLEKPTSGEIII-DPRLKIGYVPQKFNLSSDLPITVKKFLDLLAPNNLTNDIKEIHSFIDLER-LKDQKISTLSGGQFQKIVLASSLLSKPDLIILDEPLQSLDVTSQQ 159
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: TLRC_STRFR (Tylosin resistance ATP-binding protein tlrC OS=Streptomyces fradiae GN=tlrC PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.274e-15 Identity = 61/183 (33.33%), Postives = 84/183 (45.90%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLL---GEHNVLPNYF----EQNQAEALDLDKTVLE-----------TVAEAAEDWRIDDIKGLLGRCNFKADM-----------------------LDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y+DR++ ++ +L I GEK IIG NG GKSTLL+L+ G E+P GEV + G LP +A+DL T L +AEAA D + D R + ++ DR++ LSGGE++RLA + LL+LDEPTN LD Sbjct: 18 YDDRVVLSQVSLAISPGEKAGIIGDNGAGKSTLLRLLAGEERPDAGEVTVIAPGGVGYLPQTLGLPPRATVQDAIDLAMTELRVLEAELRRTEAALAEAATDEALQDALTAYARLTEQYEVRDGYGADARVDAALHGLGLPGLPRDRRLGTLSGGERSRLALAATLASQPELLLLDEPTNDLD 200
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: AB1F_ARATH (ABC transporter F family member 1 OS=Arabidopsis thaliana GN=ABCF1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.274e-15 Identity = 50/146 (34.25%), Postives = 74/146 (50.68%), Query Frame = 1 Query: 10 FGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 FGY D L++ + ++ + A++GPNG GKSTLLKL+ G P G V H + Y Q+ AE LDL+ L + + ++ +GR + LS G+++R+ F K +L+LDEPTNHLDI Sbjct: 387 FGYTPDYLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGELHPTEGMVRRHNHLKIAQY-HQHLAEKLDLELPALLYMMREFPGTEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYKQPNMLLLDEPTNHLDI 531
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC_MARAV (Zinc import ATP-binding protein znuC OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=znuC PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.706e-15 Identity = 51/145 (35.17%), Postives = 77/145 (53.10%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAE--AAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 ++DR + +R NLT+ RG+ IIGPNG GK+TL+K ++G+++ G++ +V P + L L+ T+ +V + D L R A +LD V LSGGEK RL + + + LLVLDEP +DI Sbjct: 15 FDDRPVVDRVNLTVSRGDIVTIIGPNGAGKTTLIKTVLGIQRATSGQL-----SVAPGLVIGYVPQHLTLEPTLPLSVRRFMLLSGRTLADCTAALERTGV-AHLLDASVHHLSGGEKQRLLLARALARKPDLLVLDEPAQGVDI 153
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YB89_SCHPO (Uncharacterized ABC transporter ATP-binding protein C29A3.09c OS=Schizosaccharomyces pombe GN=SPBC29A3.09c PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.706e-15 Identity = 45/143 (31.47%), Postives = 78/143 (54.55%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP-NYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 + ++ ++ + ++GPNG GKST+LKL++ P G ++ H L YF Q+ + LDL+ L +A+ ++ + LG + +K+ LSGG+K+R+AF ++ +L+LDEPTNHLD+ S + Sbjct: 533 ILKHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTSG--IVSRHPRLRIAYFAQHHVDTLDLNLNALSFLAKTFPGKGEEEYRRHLGAFGVSGPLALQKMITLSGGQKSRVAFACLGLQNPHILILDEPTNHLDMESMD 673
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC_RICCN (Zinc import ATP-binding protein znuC OS=Rickettsia conorii GN=znuC PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.078e-14 Identity = 47/150 (31.33%), Postives = 84/150 (56.00%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTV---LETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 + ++L N + T+++ T +IGPNG GK+T+++L++GLEKP GE+++ + + Y Q DL TV LE +A + + I +I + + K D+++S LSGG+ ++ +V L++LDEP LD+ S++ Sbjct: 15 FGNKLPINNVSFTVKKNNITTLIGPNGAGKTTIVRLMLGLEKPTSGEIII-DPKLKIGYVPQKFGLTPDLPITVKNFLELLAPSNFNNNIKEINSFIDLEHIK----DQEISKLSGGQFQKVVLACSIVNNPDLIILDEPLQSLDVTSQQ 159 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |