CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_CLONN (Spermidine/putrescine import ATP-binding protein potA OS=Clostridium novyi (strain NT) GN=potA PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11 Identity = 46/144 (31.94%), Postives = 75/144 (52.08%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLL--GEHNVLPNYFEQ----NQAEALDLDKTVLETVAEAAEDWRI--DDIKGLLGRCNFKADM---LDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 NL I++ E ++GP+GCGK+T L+++ G E GEV+ + N +P Y Q Q AL ++ E +A ++ D IK + R D+ +R + LSGG++ R+A + +V +L+LDEP LD+ Sbjct: 25 NLNIKKNEFLTLLGPSGCGKTTTLRILGGFEDATNGEVIFEGKKINDVPPYKRQINTVFQKYALFPHMSIFENIAFGLNIKKVPKDQIKTRVKRMLKLVDLEGYENRSIDSLSGGQQQRIAIARALVNEPKVLLLDEPLGALDL 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA1_PSEAE (Spermidine/putrescine import ATP-binding protein potA 1 OS=Pseudomonas aeruginosa GN=potA1 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11 Identity = 49/154 (31.82%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 40 RANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLL-GEHNVLPNYFEQN-----QAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML---------DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 R +L I E ++GP+GCGK+TLL++I G E P GE+LL GE+ FE+ Q AL ++ E +A E + G +ML DR+ LSGG++ R+A + + +L+LDEP + LD+ ++ Sbjct: 33 RVDLDIRDNEFFTLLGPSGCGKTTLLRMIAGFEFPTEGEILLYGENIAARPPFERPVNTVFQHYALFPHMSIAENLAFGLESRPLGRSLGKAEIAERVREMLALVQMERFADRRPGQLSGGQQQRVALARALAPQPRVLLLDEPLSALDLKLRQ 186
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: NIKE_SHIBS (Nickel import ATP-binding protein nikE OS=Shigella boydii serotype 4 (strain Sb227) GN=nikE PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11 Identity = 45/163 (27.61%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV-LLGEHNVLPNYFE------------QNQAEALDLDKTVLETVAE-------AAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 ++ + + N +LT++ GE A++G +GCGKSTL +L++GLE P G + GE N + Q+ A++ KTV E + E + ++ +L + +LD++ LSGG+ R+ + + LL+LDE ++LD+ Sbjct: 22 HQHQAVLNNVSLTLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNISWRGESLAKLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRVCLARALAVEPKLLILDETVSNLDL 184
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: HMUV_RHOPA (Hemin import ATP-binding protein hmuV OS=Rhodopseudomonas palustris GN=hmuV PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11 Identity = 54/176 (30.68%), Postives = 79/176 (44.89%), Query Frame = 1 Query: 10 FGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV--------------------LLGEHNVL--PNYFEQNQAEALDLDKTVLETVAEAA-EDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK--------PSTLLVLDEPTNHLDI 444 F L +R +LTI +GE AI+GPNG GKSTLL+++ G +P G V +L +H + P E+ A D+D + +AA D +D + R ++ LSGGE+ R F + +V+ LL+LDEPT+ LDI Sbjct: 12 FALPGATLVDRVDLTITQGELVAIVGPNGAGKSTLLRMLSGDLRPTSGTVSLDGRALADYPPRALAARRAMLAQHTTVSFPFSVEEIVAMGADIDPRKAAPLFDAALRDVGLDHFR-------------HRDITTLSGGEQQRAHFARILVQLWSGEADAGPGLLLLDEPTSSLDI 174
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: FBPC_BRUAB (Fe(3+) ions import ATP-binding protein fbpC OS=Brucella abortus GN=fbpC PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11 Identity = 51/147 (34.69%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV--LP----NYFEQNQAEALDLDKTVLETVAEAAED---------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 +LT+E G ++GP+GCGK+T L+L+ GLE P G +L+G +V LP + Q+ AL T LE VA E R ++ L+G M R + LSGG++ R+A + +V +L+LDEP + LD Sbjct: 28 SLTVEPGTLVTLLGPSGCGKTTTLRLLAGLEHPTSGRILIGGKDVTNLPANERDVSMVFQSYALFPHMTSLENVAYGLESSGFKKNEARERAEEGLKLVG----LGGMGHRLPAELSGGQQQRVAVARALVLEPQVLLLDEPLSTLD 170
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: FBPC_BRUA2 (Fe(3+) ions import ATP-binding protein fbpC OS=Brucella abortus (strain 2308) GN=fbpC PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11 Identity = 51/147 (34.69%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV--LP----NYFEQNQAEALDLDKTVLETVAEAAED---------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 +LT+E G ++GP+GCGK+T L+L+ GLE P G +L+G +V LP + Q+ AL T LE VA E R ++ L+G M R + LSGG++ R+A + +V +L+LDEP + LD Sbjct: 28 SLTVEPGTLVTLLGPSGCGKTTTLRLLAGLEHPTSGRILIGGKDVTNLPANERDVSMVFQSYALFPHMTSLENVAYGLESSGFKKNEARERAEEGLKLVG----LGGMGHRLPAELSGGQQQRVAVARALVLEPQVLLLDEPLSTLD 170
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: CYSA_METCA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Methylococcus capsulatus GN=cysA PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11 Identity = 49/152 (32.24%), Postives = 75/152 (49.34%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVA-------------EAAEDWRIDDIKGLLGRCNFKADML-DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 +LTI GE A++GP+GCGK+TLL++I GLE G++LL + + + Q AL +V E +A EA R+ ++ L+ + D L DR LSGG++ R+A + + +L+LDEP LD Sbjct: 22 DLTIGSGELVALLGPSGCGKTTLLRIIAGLEAADSGQILLHGEDTTHRHVRERRVGFVFQHYALFRHMSVFENIAFGLRVRPRGQRPPEAEIRRRVQELLELV-----QLDWLADRHPGQLSGGQRQRIALARALAVEPKVLLLDEPFGALD 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: CBIO1_STAS1 (Cobalt import ATP-binding protein cbiO 1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=cbiO1 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11 Identity = 49/165 (29.70%), Postives = 84/165 (50.91%), Query Frame = 1 Query: 1 RGEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVL-------------LGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRI--DDIKGLLGRCNFKADMLDR---KVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 R ++ ++ L N + I +G+ T+I+G NG GKST+ KL++G+EKP G + L +H + +NQ + TV VA E+ + DD++ ++ + +MLDR + LSGG+K R+A + + +++LDE T+ LD Sbjct: 14 RFKYNSDEPLALNDVSFGIPKGKWTSIVGHNGSGKSTIAKLMVGIEKPSDGHIYFRNQCINQQNLSDLRQHIGIVFQNPENQF----VGSTVAFDVAFGLENNSVSYDDMQRIVPKALEDVEMLDRADYEPQSLSGGQKQRVAIAGVLALNTDVIILDEATSMLD 174 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |