CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_MANSM (Spermidine/putrescine import ATP-binding protein potA OS=Mannheimia succiniciproducens (strain MBEL55E) GN=potA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.078e-14 Identity = 53/156 (33.97%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLL---------GEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRI--DDIKGLL---GRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y + + + NLTI GE I+GP+GCGK+T+L+LI G E+ GG+++L EH + F Q+ AL T+ E VA ++ ++IK + R +M DRK + LSGG++ R+A + +V +L+LDE + LD Sbjct: 20 YNENTIIDNFNLTINNGEFLTILGPSGCGKTTVLRLIAGFEEANGGQIILDGEDVTDLPAEHRPVNTVF---QSYALFPHMTIFENVAFGLRMQKVPNEEIKPRVLEALRMVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALD 172
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC_RICFE (Zinc import ATP-binding protein znuC OS=Rickettsia felis GN=znuC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.408e-14 Identity = 46/150 (30.67%), Postives = 84/150 (56.00%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTV---LETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 + ++L N + T+++ T +IGPNG GK+T+++L++GLEKP GE+++ + + Y Q DL TV L+ +A + + I +I + + K D+++S LSGG+ ++ +V L++LDEP LD+ S++ Sbjct: 15 FGNKLPINNVSFTVKKNNITTLIGPNGAGKTTIVRLMLGLEKPTNGEIII-DPKLKIGYVPQKFGLTPDLPITVKKFLDLLAPSNFNSNIKEINSFIDLEHIK----DQEISKLSGGQFQKVVLACSIVNKPDLIILDEPLQSLDVTSQQ 159
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ABCF4_DICDI (ABC transporter F family member 4 OS=Dictyostelium discoideum GN=abcF4 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.839e-14 Identity = 51/151 (33.77%), Postives = 79/151 (52.32%), Query Frame = 1 Query: 10 FGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMG-LEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 FGYE R +F + ++ I+ K A++G NG GKSTL+KL+ G L + G + + F Q+ + LD T +E + + I+ LGR + K++ LSGG+K+R+ + +L+LDEPTNHLDI + E Sbjct: 930 FGYEGRPTMFKKLDIGIDMDSKIALVGMNGVGKSTLMKLMNGDLHETTG--YIERSRKMRVARFSQHFVDQLDTTMTPIEYFQSKFNNPPVQQIRNHLGRFGICNSLPLHKITTLSGGQKSRVILAELAWAEPHILLLDEPTNHLDIDAIE 1078
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: AB4F_ARATH (ABC transporter F family member 4 OS=Arabidopsis thaliana GN=ABCF4 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.138e-14 Identity = 50/153 (32.68%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 10 FGYEDRLLFNRANLT--IERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPS 450 F Y +R F +N+ I+ G + AI+GPNG GKSTLL L+ G P GE+ + + Y Q+ + L + +T ++ + D + + ++ LG+ + ++ LSGG+KAR+ F + +L+LDEPTNHLD+ S Sbjct: 503 FSYPNRPDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEMRRSQKLRIGRY-SQHFVDLLTMGETPVQYLLRLHPDQEGFSKQEAVRAKLGKFGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQS 654
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_HAES1 (Spermidine/putrescine import ATP-binding protein potA OS=Haemophilus somnus (strain 129Pt) GN=potA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.098e-14 Identity = 53/153 (34.64%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVAEAAEDWRID--DIKGLLG---RCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y+ + + N NLTI GE I+GP+GCGK+T+L+LI G E+ G ++L +V E+ Q+ AL T+ E VA ++ DIK + R +M DRK + LSGG++ R+A + +V +L+LDE + LD Sbjct: 20 YDTKTIINNFNLTINNGEFLTILGPSGCGKTTVLRLIAGFEELNEGRIILDGEDVTDIPAERRHINTVFQSYALFPHMTIFENVAFGLRMQKVPNADIKPRVMEALRMVRLEEMADRKPTQLSGGQQQRVAIARAVVNKPKVLLLDESLSALD 172
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: EF3_SCHPO (Elongation factor 3 OS=Schizosaccharomyces pombe GN=tef3 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.098e-14 Identity = 48/146 (32.88%), Postives = 82/146 (56.16%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK---PRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 Y ++L NR L ++RG + + GPNG GKSTL++ I+ + P + EH++ ++++A+ +D +L+ A +D D+I L +F ++++ + LSGG K +LA + M K +L+LDEPTNHLD+ Sbjct: 444 YGAKILLNRTRLRLKRGRRYGLCGPNGSGKSTLMRAIVNGQVEGFPTHLRTVYVEHDI-----DESEADTPSVD-FILQDPAVPIKDR--DEIVKALKENSFTDELINMPIGSLSGGWKMKLALTRAMFKNPDILLLDEPTNHLDV 581
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_FUSNN (Spermidine/putrescine import ATP-binding protein potA OS=Fusobacterium nucleatum subsp. nucleatum GN=potA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.352e-14 Identity = 52/144 (36.11%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---PNYFEQN---QAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML------DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 NL IE+GE +IIGP+GCGK+TLL++I G P G + LG+ N++ PN N Q AL V E VA ++D+ K + N ++ +KVS LSGG++ R++ + ++ +L+LDEP + LD Sbjct: 25 NLKIEQGEFFSIIGPSGCGKTTLLRMIAGFISPDSGAIYLGDENIVNLPPNLRNVNTIFQKYALFPHLNVFENVAFPLRLKKVDE-KTINEEVNKYLKLVGLEEHSTKKVSQLSGGQQQRISIARALINKPGVLLLDEPLSALD 167
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: EF3_CANGA (Elongation factor 3 OS=Candida glabrata GN=TEF3 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 5.352e-14 Identity = 48/147 (32.65%), Postives = 77/147 (52.38%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIM-----GLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y ++L N+ L ++RG + + GPNG GKSTL++ I G P + EH++ + D +VL+ V ++E + I L F +M++ +S LSGG K +LA + ++K + +L+LDEPTNHLD Sbjct: 440 YGAKILLNKTQLRLKRGRRYGLCGPNGAGKSTLMRAIANGQVDGFPTPEECMTVYVEHDI----------DGTHADTSVLDFVV-SSEVGTKEAITAKLVEFGFTEEMINMPISSLSGGWKMKLALARAVLKNADILLLDEPTNHLD 575
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC_MAGSA (Zinc import ATP-binding protein znuC OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=znuC PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.990e-14 Identity = 46/141 (32.62%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 28 LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV--LPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 L+ +R +LT++ G ++GPNG GKS+LLK+ +GL +P G V G + +P + + L + + + VAE R+++ L+G +L R+V LSGGE R+ + +++ LLVLDEP +D+ Sbjct: 17 LVLDRVDLTVDAGRIITVVGPNGAGKSSLLKVALGLLRPDAGTVERGAKVIGYVPQRLDIGRLLPLSVRRFLAMAVAERPPAGRLEETLDLVG----AGHVLGRQVVDLSGGEMQRVLLARALLRRPDLLVLDEPVGGVDV 153
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: HFAC_CAUCR (Holdfast attachment protein C OS=Caulobacter crescentus GN=hfaC PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 6.990e-14 Identity = 51/148 (34.46%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRI-----DDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 + +R + + I RG++ A++GPNG GK+TL+KL++G + G V LG N+ +Y +Q + AL TV + + D I + G F L + V+ LSGGE+ RL + + P+ L+VLDEPTN LD+ Sbjct: 294 FGERTIVENFSTRILRGDRVALVGPNGAGKTTLVKLLLGELERDAGTVQLGT-NLEVSYIDQARM-ALSDKITVWDFLTPGGGDSIIVRGHPKHVAGYAKEFLFTDAQLRQPVTSLSGGERNRLLLARALANPTNLMVLDEPTNDLDM 439 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |