CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: EF3A_YEAST (Elongation factor 3A OS=Saccharomyces cerevisiae GN=YEF3 PE=1 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 6.990e-14 Identity = 48/147 (32.65%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIM-----GLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y ++L N+ L ++R + I GPNGCGKSTL++ I G + EH++ + D +VL+ V E+ + + IK L F +M+ +S LSGG K +LA + +++ + +L+LDEPTNHLD Sbjct: 440 YGAKILLNKTQLRLKRARRYGICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDI----------DGTHSDTSVLDFVFESGVGTK-EAIKDKLIEFGFTDEMIAMPISALSGGWKMKLALARAVLRNADILLLDEPTNHLD 575
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YBP8_SCHPO (Uncharacterized ABC transporter ATP-binding protein C16H5.08c OS=Schizosaccharomyces pombe GN=SPBC16H5.08c PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 9.129e-14 Identity = 50/150 (33.33%), Postives = 75/150 (50.00%), Query Frame = 1 Query: 13 GYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAE----DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPS 450 G D L+ + I+ + AI+G NG GKSTLL LI GL P G V + Y Q+ A+ L DK+ LE + + + + + + +LG+ ++ LS G K+R+ F ++ +L+LDEPTNHLDI S Sbjct: 399 GNLDHALYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGLLIPIEGNVSRYSGLKMAKY-SQHSADQLPYDKSPLEYIMDTYKPKFPERELQQWRSVLGKFGLSGLHQTSEIRTLSDGLKSRVVFAALALEQPHILLLDEPTNHLDITS 547
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_LAWIP (Spermidine/putrescine import ATP-binding protein potA OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=potA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 9.129e-14 Identity = 51/153 (33.33%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAE------ALDLDKTVLETVA-----EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 +ED + NL I GE ++GP+GCGK+T+L++I G E P GE+L+ NV E+ Q AL TV + VA + +++++ R + DR+ S LSGG++ R+A + +V LL+LDEP + LD Sbjct: 17 FEDTCALDNINLQIANGEFLTLLGPSGCGKTTILRIISGFETPDVGEILIAGVNVSGFPPERRQVNTVFQHYALFPHMTVRDNVAFGLRMQKCPREKVNELVFEALRMVHLENFADRRPSQLSGGQQQRVAIARAVVNKPLLLLLDEPFSALD 169
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: CCMA_GLUOX (Cytochrome c biogenesis ATP-binding export protein ccmA OS=Gluconobacter oxydans GN=ccmA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 9.129e-14 Identity = 54/154 (35.06%), Postives = 74/154 (48.05%), Query Frame = 1 Query: 22 DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVL-------LGEHNVLPN--YFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 DRL+ + +LT++ G+ + GPNG GKSTLL+ I GL +P GEV+ LG + L QN A A L L EA + + D+ LLS G+K R AF + M+ + L +LDEPT LD+ S E Sbjct: 28 DRLVLDGVSLTLDAGDAMILTGPNGAGKSTLLRTISGLRRPDSGEVIRYGDLAWLGHQDALKPGLTLAQNLALAEKLGTNSLSDALEALDLTHLTDL----------------PARLLSSGQKRRAAFARVMLSGALLWLLDEPTVGLDVASIE 165
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: FBPC_PHOPR (Fe(3+) ions import ATP-binding protein fbpC OS=Photobacterium profundum GN=fbpC PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.192e-13 Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVA--------EAAE-DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 + D + N +L I++G ++GP+GCGK+T+L+L+ GLEKP G++ + +V +Q Q+ AL ++ + V AAE R+DD L+ + M DR V +SGG++ R+A + +V +L+ DEP ++LD Sbjct: 16 FGDNTVINNLDLEIKKGSLVTLLGPSGCGKTTVLRLVAGLEKPTSGQIFIDGEDVTNTSIQQRDICMVFQSYALFPHLSLYDNVGYGLKMLKLPAAEIKQRVDDALKLVD----LSGMGDRFVDQISGGQQQRIALARALVLKPKVLLFDEPLSNLD 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ABCF2_MOUSE (ATP-binding cassette sub-family F member 2 OS=Mus musculus GN=Abcf2 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.192e-13 Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEA-AEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 ++N I+ + A++GPNG GKSTLLKL+ G P G + H + Y Q+ E LDLD + LE + + E ++++ ++GR + LS G+K R+ + +L LDEPTNHLDI Sbjct: 417 IYNNLEFGIDLDTRVALVGPNGAGKSTLLKLLTGELLPTDGMIRKHSHVKIGRY-HQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDI 554
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ABCF2_HUMAN (ATP-binding cassette sub-family F member 2 OS=Homo sapiens GN=ABCF2 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.192e-13 Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEA-AEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 ++N I+ + A++GPNG GKSTLLKL+ G P G + H + Y Q+ E LDLD + LE + + E ++++ ++GR + LS G+K R+ + +L LDEPTNHLDI Sbjct: 412 IYNNLEFGIDLDTRVALVGPNGAGKSTLLKLLTGELLPTDGMIRKHSHVKIGRY-HQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDI 549
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ABCF2_BOVIN (ATP-binding cassette sub-family F member 2 OS=Bos taurus GN=ABCF2 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.192e-13 Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEA-AEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 ++N I+ + A++GPNG GKSTLLKL+ G P G + H + Y Q+ E LDLD + LE + + E ++++ ++GR + LS G+K R+ + +L LDEPTNHLDI Sbjct: 414 IYNNLEFGIDLDTRVALVGPNGAGKSTLLKLLTGELLPTDGMIRKHSHVKIGRY-HQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDI 551
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: SSUB1_NOCFA (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Nocardia farcinica GN=ssuB1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.557e-13 Identity = 55/149 (36.91%), Postives = 75/149 (50.34%), Query Frame = 1 Query: 1 RGEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLL-GEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKAD-MLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 R FG D+ + + +LTI RGE ++GP+G GK+TLL+L+ GLE P GEVL+ G + Q L K VL V R + GL + D D+ + LSGGE R A + +V+ LL+LDEP LD Sbjct: 14 RKSFG--DKTVLDGVDLTIRRGEFVVLLGPSGTGKTTLLRLLTGLEVPDAGEVLVPGRRTTV------YQEPRLIPSKRVLANVLVGLRRTRSNRAAGLAALAEVQLDGKADQWPATLSGGEAQRAALARALVREPELLLLDEPFAALD 154
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YVRA_BACSU (Uncharacterized ABC transporter ATP-binding protein yvrA OS=Bacillus subtilis GN=yvrA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.034e-13 Identity = 53/163 (32.52%), Postives = 77/163 (47.24%), Query Frame = 1 Query: 13 GYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEAL-----DLDKTVLETVAEAAEDWRIDDIKGLLGRCNFK--------------ADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 GY D L N +LT+E+GE I+GPNG GK+TLL L+ G + G V L +L +Y + A+ + +D+ TV E R GL + K AD + + LSGGE+ R+ + + + +L LDEPTN LD+ Sbjct: 9 GYGDSRLINNVSLTVEKGEFLGILGPNGSGKTTLLHLLTGTLPAKKGRVYLA-GKLLADYKPKELAQIMAVLPQKMDQAFTFTVEETVAFGRYPFQTGLFRQQTEKGEAIVQEAMEQTGVADFAQKPIRELSGGEQQRVYLAQALAQQPRILFLDEPTNFLDL 170 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |