CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: EF3_CANAL (Elongation factor 3 OS=Candida albicans GN=TEF3 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.034e-13 Identity = 46/144 (31.94%), Postives = 74/144 (51.39%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVL-LGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIK-GLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y ++L N+ ++R + + GPNG GKSTL++ I G+V + + ++ + D TV+E V E E D+ L NF +M++ + LSGG K +LA + ++K + +L+LDEPTNHLD Sbjct: 442 YGAKILLNKTQFRLKRNRRYGLCGPNGAGKSTLMRAIAN------GQVEGFPTQDECKTVYVEHDIDGTHADTTVVEFVIEDGEVGLTKDVVVDKLREFNFSDEMINMPIQSLSGGWKMKLALARAVLKNADILLLDEPTNHLD 579
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: CCMA_METCA (Cytochrome c biogenesis ATP-binding export protein ccmA OS=Methylococcus capsulatus GN=ccmA PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 2.034e-13 Identity = 52/155 (33.55%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 22 DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVL---LGEHNVLPNYFEQ----NQAEALDLDKTVLETV-------AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 DRLLF+ NLT+ G+ + G NG GK++LL+++ GL +P GEV L + +YF + A L + + LE + A++ RIDD +G F+ D LS G+K R A C+ ++ P L +LDEP LD+ Sbjct: 17 DRLLFSGLNLTLSPGQLLQVEGANGAGKTSLLRVLAGLSRPAEGEVRWRGLDIQHHRASYFTEMVYMGHAPGLKAELSPLENLRVSVALRGRMADEARIDDALARVGLRGFE----DVPARGLSAGQKQRTALCRLLLDPVPLWILDEPFTALDV 167
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC_AERHH (Zinc import ATP-binding protein znuC OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=znuC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.656e-13 Identity = 49/146 (33.56%), Postives = 81/146 (55.48%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETV---AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 ++ R + ++ + T+ +G+ T ++GPNG GKSTL KL++GL P G++ ++ Y Q L LD T+ TV + ++ R+ I+ L R + D+LD ++ LSGGE R+ + ++ LLVLDEP +DI Sbjct: 14 FDGRSVLDKVSFTLNKGKITTLVGPNGAGKSTLSKLVLGLLTPDSGQI-TRSRDLRVGYVPQR----LYLDPTLPLTVRRFLQLGKNGRL-SIEEALNRVGAE-DLLDNRMQKLSGGEMQRVLLARALLVKPELLVLDEPVQGVDI 152
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: Y089_METJA (Uncharacterized ABC transporter ATP-binding protein MJ0089 OS=Methanocaldococcus jannaschii GN=MJ0089 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.656e-13 Identity = 52/170 (30.59%), Postives = 84/170 (49.41%), Query Frame = 1 Query: 7 EFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGR-CNFKADMLDRKVSL--------------------LSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSK 453 EF Y+ R + N ++RGE +I+G NG GKSTLLK I + KP+ G +L+ + F+ + L+L K V A ++ LLGR + K ++ DR + + LSGGE ++ + +V+ +L+LDEPTN+LD+ ++ Sbjct: 12 EFAYKSRQILNNIKFEVKRGEVVSILGVNGAGKSTLLKCINKILKPKRGTILI-------DNFDIKNLDNLELAKKVGYVPQRAEGNYMTVFDAVLLGRKPHIKWEVSDRDIEITHKVLKLLNLEDYALRYTNELSGGELQKVIIARALVQEPQILLLDEPTNNLDLKNQ 174
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTG_ECOLI (Putrescine transport ATP-binding protein potG OS=Escherichia coli (strain K12) GN=potG PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.656e-13 Identity = 52/162 (32.10%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG--EHNVLPNYF------------------EQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y+ + + +LTI +GE A++G +GCGKSTLL+++ G E+P G+++L + + +P Y EQN A L DK +A R++++ GL+ F RK LSGG++ R+A + + K LL+LDEP LD Sbjct: 29 YDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLVHMQEF----AKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALD 181
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_MYCMS (Spermidine/putrescine import ATP-binding protein potA OS=Mycoplasma mycoides subsp. mycoides SC GN=potA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.656e-13 Identity = 45/160 (28.12%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDR-----------------KVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 Y+ +++ + ++ GE ++GP+GCGK+T+LK+I G +KP GE+L + N++P + Q T+ ++ A D++ L K D+++R K+ LSGG+K R+A + +V +L+LDEP LD+ Sbjct: 15 YDGQVVLKGISFNVKEGEFITLLGPSGCGKTTILKIIGGSQKPNSGEILFEDKNLIPIPINKRQF------NTIFQSYALFPHLNVFDNVAFGLTIKKTKKDIIEREVMRQIRQVGLEGYENKKIDELSGGQKQRIAIARALVMKPKVLLLDEPMAALDV 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_HAEIN (Spermidine/putrescine import ATP-binding protein potA OS=Haemophilus influenzae GN=potA PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.656e-13 Identity = 51/153 (33.33%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVAEAAEDWRI--DDIKGLL---GRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y + N NLTI GE I+GP+GCGK+T+L+L+ GLE+ G ++L ++ E+ Q+ AL T+ E VA ++ ++IK + R +M DRK + LSGG++ R+A + +V +L+LDE + LD Sbjct: 20 YGSNTIINDFNLTINNGEFVTILGPSGCGKTTVLRLLAGLEELDSGSIILDGEDITNVPAEKRHINTVFQSYALFPHMTIFENVAFGLRMQKVPNEEIKPRVLEALRMVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALD 172
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: OPPF2_STAAW (Putative oligopeptide transport ATP-binding protein oppF2 OS=Staphylococcus aureus (strain MW2) GN=oppF2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.656e-13 Identity = 49/158 (31.01%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 10 FGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWR-IDD-------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 FGY + ++ N+TI GE I+G +GCGKSTL L++GL KP GE+ L ++ VLP + Q+ + + D T+ ++ EA +R + D + L A +L + S +SGG+ R + ++ +L+ DE T++LD+ +++ Sbjct: 9 FGYNKKQMVLQDINITIPDGENVGILGESGCGKSTLASLVLGLFKPAKGEIYLSDNAVLPIF--QHPLTSFNPDWTIETSLKEALYYYRGLTDNTAQDQLLLQHLSTFELNAQLLTKLPSEVSGGQLQRFNVMRSLLAQPRVLICDEITSNLDVIAEQ 164
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: OPPF2_STAAS (Putative oligopeptide transport ATP-binding protein oppF2 OS=Staphylococcus aureus (strain MSSA476) GN=oppF2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.656e-13 Identity = 49/158 (31.01%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 10 FGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWR-IDD-------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 FGY + ++ N+TI GE I+G +GCGKSTL L++GL KP GE+ L ++ VLP + Q+ + + D T+ ++ EA +R + D + L A +L + S +SGG+ R + ++ +L+ DE T++LD+ +++ Sbjct: 9 FGYNKKQMVLQDINITIPDGENVGILGESGCGKSTLASLVLGLFKPAKGEIYLSDNAVLPIF--QHPLTSFNPDWTIETSLKEALYYYRGLTDNTAQDQLLLQHLSTFELNAQLLTKLPSEVSGGQLQRFNVMRSLLAQPRVLICDEITSNLDVIAEQ 164
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: OPPF2_STAAB (Putative oligopeptide transport ATP-binding protein oppF2 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=oppF2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.656e-13 Identity = 50/158 (31.65%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 10 FGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWR-IDD-------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 FGY + ++ N+TI GE I+G +GCGKSTL L++GL KP GE+ L ++ VLP + Q+ + + D T+ ++ EA +R + D + L A +L + S +SGGE R + ++ +L+ DE T++LD+ +++ Sbjct: 9 FGYNKKQMVLQDINITIPDGENVGILGESGCGKSTLASLVLGLFKPVKGEIYLSDNAVLPIF--QHPLTSFNPDWTIETSLKEALYYYRGLTDNTAQDQLLIQHLSTFELNAQLLTKLPSEVSGGELQRFNVMRSLLAQPRVLICDEITSNLDVIAEQ 164 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |