CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_MYCCT (Spermidine/putrescine import ATP-binding protein potA OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=potA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.469e-13 Identity = 45/160 (28.12%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDR-----------------KVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 Y+ +++ + ++ GE ++GP+GCGK+T+LK+I G +KP GE+L + N++P + Q T+ ++ A D++ L K D+++R K+ LSGG+K R+A + +V +L+LDEP LD+ Sbjct: 15 YDGQVVLKGISFNVKEGEFITLLGPSGCGKTTILKIIGGSQKPNSGEILFEDKNLIPIPINKRQF------NTIFQSYALFPHLNVFDNVAFGLTIKKTKKDIIEREVMRQIRQVGLEGYENKKIDELSGGQKQRVAIARALVMKPKVLLLDEPMAALDV 168
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: POTA_MESFL (Spermidine/putrescine import ATP-binding protein potA OS=Mesoplasma florum GN=potA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.531e-13 Identity = 46/164 (28.05%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML-----------------DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 Y+ +++ +L I+ GE ++GP+GCGK+T L+++ G EKP G+++ ++LP + Q T+ ++ A D+I L K D+L DR ++ LSGG+K R+A + +V +L+LDEP LD+ ++ Sbjct: 15 YDGKVVLKGIDLNIKEGEFITLLGPSGCGKTTTLRIVAGFEKPNSGQIMFEGKDLLPIPINKRQF------NTIFQSYALFPHLNVFDNIAFGLRTKKTKKDILQREVLKQIRQVGLEGFEDRNINDLSGGQKQRVAIARALVMKPKVLLLDEPLAALDVQLRQ 172
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: OPPF2_STAAC (Putative oligopeptide transport ATP-binding protein oppF2 OS=Staphylococcus aureus (strain COL) GN=oppF2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.531e-13 Identity = 49/158 (31.01%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 10 FGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWR-IDD-------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 FGY + ++ N+TI GE I+G +GCGKSTL L++GL KP GE+ L ++ VLP + Q+ + + D T+ ++ EA +R + D + L A +L + S +SGG+ R + ++ +L+ DE T++LD+ +++ Sbjct: 9 FGYNKKQMVLQDINITIPDGENVGILGESGCGKSTLASLVLGLFKPVKGEIYLSDNAVLPIF--QHPLTSFNPDWTIETSLKEALYYYRGLTDNTAQDQLLLQHLSTFELNAQLLTKLPSEVSGGQLQRFNVMRSLLAQPRVLICDEITSNLDVIAEQ 164
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: OPPF2_STAA8 (Putative oligopeptide transport ATP-binding protein oppF2 OS=Staphylococcus aureus (strain NCTC 8325) GN=oppF2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.531e-13 Identity = 49/158 (31.01%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 10 FGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWR-IDD-------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 FGY + ++ N+TI GE I+G +GCGKSTL L++GL KP GE+ L ++ VLP + Q+ + + D T+ ++ EA +R + D + L A +L + S +SGG+ R + ++ +L+ DE T++LD+ +++ Sbjct: 9 FGYNKKQMVLQDINITIPDGENVGILGESGCGKSTLASLVLGLFKPVKGEIYLSDNAVLPIF--QHPLTSFNPDWTIETSLKEALYYYRGLTDNTAQDQLLLQHLSTFELNAQLLTKLPSEVSGGQLQRFNVMRSLLAQPRVLICDEITSNLDVIAEQ 164
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: OPPF2_STAA3 (Putative oligopeptide transport ATP-binding protein oppF2 OS=Staphylococcus aureus (strain USA300) GN=oppF2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.531e-13 Identity = 49/158 (31.01%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 10 FGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWR-IDD-------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 FGY + ++ N+TI GE I+G +GCGKSTL L++GL KP GE+ L ++ VLP + Q+ + + D T+ ++ EA +R + D + L A +L + S +SGG+ R + ++ +L+ DE T++LD+ +++ Sbjct: 9 FGYNKKQMVLQDINITIPDGENVGILGESGCGKSTLASLVLGLFKPVKGEIYLSDNAVLPIF--QHPLTSFNPDWTIETSLKEALYYYRGLTDNTAQDQLLLQHLSTFELNAQLLTKLPSEVSGGQLQRFNVMRSLLAQPRVLICDEITSNLDVIAEQ 164
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ELF1_SCHPO (mRNA export factor elf1 OS=Schizosaccharomyces pombe GN=elf1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.531e-13 Identity = 46/147 (31.29%), Postives = 74/147 (50.34%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRID----DIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 Y RLL + NL + RG + ++G NGCGKSTLL+ I + + + F + + D +L+ VA+ ++ + L F A+M + V+ LSGG K +L + M++ + +L+LDEPTNHLD+ Sbjct: 454 YGGRLLLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAIGDYKVEN-----FPSPDEVKTCFVAHSLQGEDTSMAILDFVAQDKALLTMNVTRQEAADALHSVGFTAEMQENPVASLSGGWKMKLELARAMLQKADILLLDEPTNHLDV 595
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: EF3_PNECA (Elongation factor 3 OS=Pneumocystis carinii GN=TEF3 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.531e-13 Identity = 49/146 (33.56%), Postives = 77/146 (52.74%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAE---AAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 Y ++L NR +L ++RG + + GPNG GKSTLL+ I + L G L + ++ + + +V + +A + + I LL +F DML +S LSGG K +LA + M++ +L+LDEPTNHLD+ Sbjct: 439 YGAKILLNRTSLNLKRGYRYGLCGPNGSGKSTLLRSIFNGQ-------LEGFPTELKTAYVEHDIDDTESKTSVFDFIANDPSVVVKNKQEVISSLLEH-SFTEDMLSIPISNLSGGWKMKLALVRAMLRQVDILLLDEPTNHLDV 576
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC_VIBPA (Zinc import ATP-binding protein znuC OS=Vibrio parahaemolyticus GN=znuC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.917e-13 Identity = 43/146 (29.45%), Postives = 84/146 (57.53%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH---NVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 ++DR + + ++ +E+G+ T +IGPNG GKSTL+K+I+GL+KP G+++ + +P + N + L++ + L + ++ +D ++ L+G ++ + LSGGE R+ + +++ LLVLDEP +D+ Sbjct: 14 FDDRRVLDNISMELEKGKITTLIGPNGAGKSTLVKVILGLQKPTSGKLVKAKKLKIGYVPQKLKLNDSLPLNVIR-FLNLAGKYSKQECLDALR-LVG----AEHLIKSNMHRLSGGENQRVLLARALLQRPDLLVLDEPAQGVDV 153
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: OPPF2_STAAR (Putative oligopeptide transport ATP-binding protein oppF2 OS=Staphylococcus aureus (strain MRSA252) GN=oppF2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.917e-13 Identity = 49/158 (31.01%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 10 FGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWR-IDD-------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 FGY + ++ N+TI GE I+G +GCGKSTL L++GL KP GE+ L ++ VLP + Q+ + + D T+ ++ EA +R + D + L A +L + S +SGG+ R + ++ +L+ DE T++LD+ +++ Sbjct: 9 FGYNKKQMVLQDINITIPDGENVGILGESGCGKSTLASLVLGLFKPVKGEIYLSDNAVLPIF--QHPLTSFNPDWTIETSLKEALYYYRGLTDNTAQDQLLIQHLSTFELNAQLLTKLPSEVSGGQLQRFNVMRSLLAQPRVLICDEITSNLDVIAEQ 164
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: MALK_MANSM (Maltose/maltodextrin import ATP-binding protein malK OS=Mannheimia succiniciproducens (strain MBEL55E) GN=malK PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.917e-13 Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGE---HNVLPN-----YFEQNQAEALDLDKT-------VLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 Y D + NL I GE +GP+GCGKSTLL++I GLE GE+ +GE ++V P+ Q+ A LD L V + D R++ + +L A +LDRK LSGG++ R+A + +V + +LDEP ++LD Sbjct: 13 YGDVHISKDINLEINEGEFVVFVGPSGCGKSTLLRMIAGLEDITTGELYIGEKLMNDVEPSKRGIGMVFQSYALYPHLDVADNMSFGLKLAGVKKNERDQRVNQVAEILQ----LAHLLDRKPKALSGGQRQRVAIGRTLVSQPEVFLLDEPLSNLD 165 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |