CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: LOLD_MAGSA (Lipoprotein-releasing system ATP-binding protein lolD OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=lolD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.318e-12 Identity = 54/168 (32.14%), Postives = 81/168 (48.21%), Query Frame = 1 Query: 13 GYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVL--------LGE-----------------HNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 G +D + ANL I GE A++GP+G GKSTLL + LE+P GGEV LGE H++LP + + E + L + + A + ++ LLGR A+ + + LSGGE+ R+A C+ + +L+ DEPT +LD Sbjct: 18 GKDDLEVLKGANLEIRAGEIVALVGPSGAGKSTLLHIAGLLERPDGGEVFLAGNPAGALGEKERTQLRRLHLGFVYQYHHLLPEF---SAIENVVLPQMIAGVPQAKARERAME----LLGRMKL-AERAEHRPGQLSGGEQQRVAICRALANAPRVLLADEPTGNLD 177
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: FHUC_BACSU (Iron(3+)-hydroxamate import ATP-binding protein fhuC OS=Bacillus subtilis GN=fhuC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.318e-12 Identity = 46/166 (27.71%), Postives = 79/166 (47.59%), Query Frame = 1 Query: 13 GYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDI--------KGLLGRCNFK--------------ADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 GY DR++ N++I +G+ T +IGPNGCGKST+LK + + + G V L + + + + D +L EA + ++ + GR N + A+ +R + LSGG++ R+ + + + LL+LDEPT +LD+ Sbjct: 12 GYGDRVIVEDLNISIPKGKITTLIGPNGCGKSTILKTMSRIMRSHAGAVYLNGKAI-----HKMSTKDIAKDMAILPQTPEAPSGLTVHELVSYGRFPHQSGFGRLNDEDRRIIKWALEETGMAEYAERPIEALSGGQRQRVWIAMALAQGTELLLLDEPTTYLDL 172
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: EF3B_YEAST (Elongation factor 3B OS=Saccharomyces cerevisiae GN=HEF3 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.318e-12 Identity = 47/153 (30.72%), Postives = 77/153 (50.33%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFE------QNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 Y ++L N+ L ++RG + + GPNG GKSTL++ I G+ + P E ++ + D +VL+ V + D I L F +M++ ++ LSGG K +LA + ++K + +L+LDEPTNHLD + E Sbjct: 440 YGAKILLNKTQLRLKRGRRYGLCGPNGAGKSTLMRSIAN-----------GQVDGFPTQDECRTVYVEHDIDNTHSDMSVLDFVYSGNVGTK-DVITSKLKEFGFSDEMIEMPIASLSGGWKMKLALARAVLKDADILLLDEPTNHLDTVNVE 580
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ZNUC_PHOLL (Zinc import ATP-binding protein znuC OS=Photorhabdus luminescens subsp. laumondii GN=znuC PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.722e-12 Identity = 49/146 (33.56%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 16 YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAE---AAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 444 + DR + N +L ++RG ++GPNG GKSTL+++++GL +P G + + + Y Q L LD T+ TV + DI L R N A +L + + LSGGE R+ + ++ LLVLDEPT +D+ Sbjct: 14 FGDRRVLNNISLHLQRGNILTLLGPNGAGKSTLVRVVLGLIEPSSGTIEQTD-GLKIGYVPQK----LHLDPTLPLTVKRFMMLKPGVKSGDILPALERVN-AAHLLQQPMQKLSGGESQRVLLARALLNQPQLLVLDEPTQGVDV 153
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: UGPC_JANSC (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Jannaschia sp. (strain CCS1) GN=ugpC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.722e-12 Identity = 51/157 (32.48%), Postives = 79/157 (50.32%), Query Frame = 1 Query: 43 ANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH-------------NVLPNY-------FEQNQAEAL---DLDKTVL-ETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 ++ TI GE T ++GP+GCGKSTLL+++ GLE+ GE+ +G+ V NY QN L +DK + E V EAA+ ++ + LDR+ S LSGG++ R+A + +V+ L + DEP ++LD Sbjct: 23 SSFTIPDGELTVLVGPSGCGKSTLLRMVAGLEEITEGELSIGDRIVNDIDPADRNIAMVFQNYALYPHMSVAQNMGYGLKNRGMDKAAISEKVREAADMLNLN-------------EFLDRRPSQLSGGQRQRVAMGRAIVREPDLFLFDEPLSNLD 166
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: UGPC2_AGRT5 (sn-glycerol-3-phosphate import ATP-binding protein ugpC 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ugpC2 PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.722e-12 Identity = 45/147 (30.61%), Postives = 80/147 (54.42%), Query Frame = 1 Query: 46 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH-------------NVLPNY-FEQNQAEALDLDKTV-LETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 +L+ + GE I+GP+GCGKSTLL++I GLE+ GE+ +G V NY + + A ++ + + V +A RI++ ++G +D L+RK + LSGG++ R+A + +++ + + DEP ++LD Sbjct: 23 DLSFDSGEFVVILGPSGCGKSTLLRMIAGLEEITSGEIAIGGRVVNTLEPRERGCAMVFQNYALYPHMSVAANIGYALKVAGVPKAERQRRIEETAKIVG----LSDYLERKPAALSGGQRQRVAMARAIIREPAVFLFDEPLSNLD 165
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: LOLD_SHEDO (Lipoprotein-releasing system ATP-binding protein lolD OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=lolD PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.722e-12 Identity = 55/161 (34.16%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDK-------------TVLETVAEAA------EDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 + + NLT+ RGE+ AI+G +G GKSTLL ++ LE P G VLL N L + QA+ + D + LE VA A + + + K LL R L S LSGGE+ R+A + ++ L++ DEPT +LD S E Sbjct: 27 VLHEVNLTVHRGEQLAIVGSSGSGKSTLLHIMGTLESPTSGTVLLEGEN-LHQLSSKRQAQIRNQDLGFIYQFHHLLPEFSALENVAMPAFIQGKNKAQTLAEAKALLERVGL-GHRLTHLPSQLSGGERQRVAIARALINKPKLVLADEPTGNLDAVSGE 185
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: FBPC_HAES1 (Fe(3+) ions import ATP-binding protein fbpC OS=Haemophilus somnus (strain 129Pt) GN=fbpC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.722e-12 Identity = 45/150 (30.00%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 28 LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVA------EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 ++ + NL+I+RG ++GP+GCGK+T+L+L+ GLE P GE+ + +V + + Q+ AL ++ + V D R +K L + A DR V +SGG++ R+A + +V +L+ DEP ++LD Sbjct: 19 VVIDNLNLSIKRGSMVTLLGPSGCGKTTVLRLVAGLESPTEGEIFIDGEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLKMQGVGSDERKQRVKEALELVDL-AGFEDRYVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLD 167
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: BMRA_BACSU (Multidrug resistance ABC transporter ATP-binding/permease protein bmrA OS=Bacillus subtilis GN=bmrA PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.722e-12 Identity = 51/174 (29.31%), Postives = 87/174 (50.00%), Query Frame = 1 Query: 1 RGEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV---------------------LPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 R FGY+ D+L+ + IE G+ TAI+GP+G GK+TL KL+ P G + LG+ V + +N L+ D T E A + ++ IK L + F ++ +R + +LSGG++ R+A + +++ ++L+LDE T+ LD S++ Sbjct: 345 RVSFGYKPDQLILKEVSAVIEAGKVTAIVGPSGGGKTTLFKLLERFYSPTAGTIRLGDEPVDTYSLESWREHIGYVSQESPLMSGTIRENICYGLERDVTDAEIEKAAEMAYALNFIKELPNQ--FDTEVGERGI-MLSGGQRQRIAIARALLRNPSILMLDEATSSLDSQSEK 515
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: ADCC_BACSU (Probable zinc transport system ATP-binding protein adcC OS=Bacillus subtilis GN=adcC PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.722e-12 Identity = 52/164 (31.71%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 10 FGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV----LPNYFEQNQAEALD--LDKTVLETVAEAAED---W--RIDDIKGLLGRCNFKA----DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 FGY + ++ +L IE GE I GPNG KSTL+K+++G+ KP G V + + N L + Q + + TVLE V W R+++ L K D+ RK+ LSGG+K ++ + + LL+LDEPT +D S++ Sbjct: 11 FGYSHTPVLDKVSLDIESGEFVGITGPNGASKSTLIKVMLGMLKPWEGTVTISKRNTEGKRLTIGYVPQQISSFNAGFPSTVLELVQSGRYTKGKWFKRLNEEDHLEVEKALKMVEMWDLRHRKIGDLSGGQKQKICIARMLASNPDLLMLDEPTTAVDYDSRK 174 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |