CX296622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.886e-23 Identity = 61/160 (38.12%), Postives = 94/160 (58.75%), Query Frame = 3 Query: 195 TGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSEK---EFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTG-KSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662 T G + + E + + L TN+FS +NI+GSG G +YK L DGT + VKR+++ + K EF +E+A L V++R+LV LLG+C+ E+LLVY++MP G+L L + G K + W +RL +A+ ARG +LH + IHR++ Sbjct: 559 TSEVGDNIQMVEAGNMLISIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDL 718
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.886e-23 Identity = 48/147 (32.65%), Postives = 86/147 (58.50%), Query Frame = 3 Query: 231 KSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662 + + L+DL + FS N ++G G G +YKA +DG VK + S + + +EF ++++ S+ ++N+ L+G+C + +LVY++ +GSL+ LH +DD K + W R+ IA+G A+ +LH C+P ++H+NI Sbjct: 398 RGVKAFSLADLQNTASCFSPNRLLGEGTIGRVYKAKFQDGRKFAVKEIDSSLLGKGNPEEFSHIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNTRIRIALGTAKAIEYLHETCSPPLVHKNI 544
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.075e-23 Identity = 65/174 (37.36%), Postives = 101/174 (58.05%), Query Frame = 3 Query: 144 RKKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRL-QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662 RK+K D PE + K SL + L + AT +FSK N++G G G ++K +L+DG+ + VKRL ++S + +EF E + + +++RNLV +LGFCM +E++LVY+ +PN SL L G+ +DW +R I +G ARG +LHH+ IIHR++ Sbjct: 292 RKRKTDPPEESP-----------KYSL------QYDLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQ-LDWAKRYKIIVGTARGILYLHHDSPLKIIHRDL 447
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 6.629e-23 Identity = 60/151 (39.74%), Postives = 93/151 (61.59%), Query Frame = 3 Query: 213 KVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQD-SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662 K SL + + ++L AT++F+ + IG G G +YK L GT + +KR Q+ S + EKEF+ E+ L + +RNLV LLGFC + E++LVY++M NG+L D + + + +D+ RL IA+G+A+G +LH NP I HR+I Sbjct: 602 KASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNI--SVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDI 750
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 6.629e-23 Identity = 52/127 (40.94%), Postives = 83/127 (65.35%), Query Frame = 3 Query: 288 KNNIIGSGRTGTMYKALLEDGTPLMVKRL--QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662 + NIIG G G +Y+ + + + +KRL + + RS+ F AE+ TLG +++R++V LLG+ K LL+Y++MPNGSL +LLH G + W R +A+ AA+G +LHH+C+PLI+HR++ Sbjct: 694 EENIIGKGGAGIVYRGSMPNNVDVAIKRLVGRGTGRSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLH--GSKGGHLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDV 818
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 8.657e-23 Identity = 53/138 (38.41%), Postives = 84/138 (60.87%), Query Frame = 3 Query: 252 LSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662 L +L ATN + N+IG G G +Y+ +L DGT + VK L +++ ++EKEF E+ +G V+++NLV LLG+C+ R+LVY + NG+L +H + W R+ I +G A+G A+LH P ++HR+I Sbjct: 144 LRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDI 281
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.131e-22 Identity = 65/180 (36.11%), Postives = 95/180 (52.78%), Query Frame = 3 Query: 129 RRMSMRKKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662 RR++M + D EG L G ++ F +L AT+ FS +I+G+G G +Y+ DGT + VKRL+D +F E+ + +RNL+ L+G+C + ERLLVY +M NGS+ L ++DW R IAIGAARG +LH C+P IIHR++ Sbjct: 263 RRLTMLRISDKQEEG------LLGLGNLRSFTFR---------ELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAKP----ALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDV 423
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.131e-22 Identity = 72/198 (36.36%), Postives = 105/198 (53.03%), Query Frame = 3 Query: 96 LVVGIVMFFYFRRMSMRKKKDDDPEGNKWAKSLTGAKGIKVSLFEK--------SITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVK-RLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662 L VGI+ F +R S+ EG + K+ A I SL K S+ L + +AT + +IG G G++Y+ L+DG + VK R S + +EF E+ L ++++ NLVPLLG+C +++LVY M NGSL D L+ K +DWP RL IA+GAARG A+LH +IHR++ Sbjct: 536 LAVGILFFCRYRHKSITL------EG--FGKTYPMATNIIFSLPSKDDFFIKSVSVKPFTLEYIEQATEQYK--TLIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDV 723
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.477e-22 Identity = 56/150 (37.33%), Postives = 91/150 (60.67%), Query Frame = 3 Query: 213 KVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662 +V+L++K + D++K + + N+IG+G +G +Y+ + G L VK++ + S F +E+ TLGS+++RN+V LLG+C + +LL Y ++PNGSL LH A G VDW R + +G A A+LHH+C P IIH ++ Sbjct: 742 EVTLYQK--LDFSIDDIVK---NLTSANVIGTGSSGVVYRITIPSGESLAVKKMWSKEESGA-FNSEIKTLGSIRHRNIVRLLGWCSNRNLKLLFYDYLPNGSLSSRLHGA-GKGGCVDWEARYDVVLGVAHALAYLHHDCLPTIIHGDV 884
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.477e-22 Identity = 69/194 (35.57%), Postives = 105/194 (54.12%), Query Frame = 3 Query: 99 VVGIVMFFYF----RRMSMRKKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQ--DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662 VVGI + + F R+++ +KK G + L G + EK+I +L KAT +FS N I+G G GT+YK +L DG + VK+ + D + E EF+ E+ L + +RN+V LLG C+ K +LVY+ +PNG+L++ LH D W RL IAI A ++LH + + I HR++ Sbjct: 387 VVGIYLLYKFIKKQRKLNQKKKFFKRNGGLLLQQQLISTVG----MVEKTIV-FSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLE-EFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDV 574 The following BLAST results are available for this feature:
BLAST of CX296622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 253
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296622 ID=CX296622; Name=CX296622; organism=Citrus clementina; type=EST; length=665bpback to top |