CX296622

Overview
NameCX296622
Unique NameCX296622
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.132e-21
Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = 3
Query:  234 SITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVK-RLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            S+    L  +  AT  +    +IG G  G++Y+  L+DG  + VK R   S +  +EF  E+  L ++++ NLVPLLG+C    +++LVY  M NGSL D L+      K +DWP RL IA+GAARG A+LH      +IHR++
Sbjct:  581 SVKPFTLEYIELATEKYK--TLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDV 722          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.785e-21
Identity = 62/188 (32.98%), Postives = 101/188 (53.72%), Query Frame = 3
Query:  105 GIVMFFYFRRMSMRKKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQ--DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            G++ F   RR  +RK+      G    K     +G  V   +   +K    +L KAT++F+ N ++G G  GT+YK +L DG  + VKR +  D  + E EF+ E+  L  + +RN+V L+G C+  +  +LVY+H+PNG L+  LH  D    ++ W  RL I++  A   A+LH   +  + HR++
Sbjct:  366 GLIKFVKKRRKIIRKRMFFKRNGGLLLKQQLTTRGGNVQSSKIFSSK----ELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVE-EFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLH-HDSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDV 547          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.637e-21
Identity = 55/139 (39.57%), Postives = 86/139 (61.87%), Query Frame = 3
Query:  213 KVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLH 626
            K+  FE+      L DL+KA+       ++G G  GT YKA+LED T ++VKRL++   S+KEF  +M  +G + ++ N VPLL +  +K E+LLVYK+M  GSL+ ++H  +   + VDW  R+ IA G ++  ++LH
Sbjct:  329 KLFFFERCNHNFDLEDLLKASAE-----VLGKGSFGTAYKAVLEDTTAVVVKRLREVVASKKEFEQQMEIVGKINQHSNFVPLLAYYYSKDEKLLVYKYMTKGSLFGIMH-GNRGDRGVDWETRMKIATGTSKAISYLH 461          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.637e-21
Identity = 54/138 (39.13%), Postives = 80/138 (57.97%), Query Frame = 3
Query:  252 LSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQD-SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            L  + +ATN+F   N IG G  G +YK +L DG  + VK+L   S++  +EFV E+  + ++++ NLV L G C+  KE LLVY+++ N SL   L   +     +DW  R  I IG A+G A+LH      I+HR+I
Sbjct:  659 LKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDI 796          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.637e-21
Identity = 51/135 (37.78%), Postives = 85/135 (62.96%), Query Frame = 3
Query:  258 DLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            +L+KAT  F     +G G +GT+YK +LED   + VK+L++ ++ ++ F AE++ +G + + NLV + GFC     RLLV +++ NGSL ++L  ++     +DW  R  IA+G A+G A+LHH C   +IH ++
Sbjct:  528 ELVKATRKFKVE--LGRGESGTVYKGVLEDDRHVAVKKLENVRQGKEVFQAELSVIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGSLANILF-SEGGNILLDWEGRFNIALGVAKGLAYLHHECLEWVIHCDV 659          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.750e-21
Identity = 53/138 (38.41%), Postives = 80/138 (57.97%), Query Frame = 3
Query:  252 LSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQD-SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            L  + +ATN+F   N IG G  G +YK +L DG  + VK+L   S++  +EFV E+  + ++++ NLV L G C+  KE LLVY+++ N SL   L   +     +DW  R  + IG A+G A+LH      I+HR+I
Sbjct:  657 LKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDI 794          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.750e-21
Identity = 53/149 (35.57%), Postives = 91/149 (61.07%), Query Frame = 3
Query:  240 TKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF---CMAKKERLLVYKHMPNGSLYDLLHP-----ADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            TK +L DL +AT+ F   ++IG G +G+++K +L+DG+ + VKR++  ++ E+EF +E+A + SV+++NLV L G+     A + R LVY ++ N SL   + P         G  + W +R  +AI  A+  A+LHH+C   I+H ++
Sbjct:   91 TKFKLEDLEEATDGF--RSLIGKGGSGSVFKGVLKDGSQVAVKRIEGEEKGEREFRSEVAAIASVQHKNLVRLYGYSSSTSANRPRFLVYDYIVNSSLDIWIFPDRGNRGRSGGGCLSWEQRYQVAIDVAKALAYLHHDCRSKILHLDV 237          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.204e-21
Identity = 65/195 (33.33%), Postives = 110/195 (56.41%), Query Frame = 3
Query:   96 LVVGIVMFFYF-----RRMSMRKKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQD-SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            +VVGIV+         RR + ++K   + E N+     TG   ++   +       +   +  ATN+FS+   +G G +G ++K  L DG  + VKRL + +++S+KEF  E+  +  +++RNLV LLGF +  +E+++VY+++PN SL  +L      G+ +DW +R  I  G ARG  +LH +  P IIHR++
Sbjct:  305 VVVGIVILIIISGILARRFARKEKPYQEVELNQ-----TGITSVRSLQY-------KFKTIETATNNFSER--LGHGGSGHVFKGRLPDGKEIAVKRLSEKTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQGE-LDWKKRYKIIGGTARGILYLHQDSQPTIIHRDL 484          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.103e-21
Identity = 62/168 (36.90%), Postives = 86/168 (51.19%), Query Frame = 3
Query:  171 GNKWAKSLTGAKGIKVSLF---EKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQD-SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            G  W K    +K      F   E  I    L  +  ATN+F   N IG G  G +YK  L DGT + VK+L   S++  +EF+ E+  + ++ + NLV L G C+   + LLVY+ + N SL   L    +T   +DWP R  I IG ARG A+LH      I+HR+I
Sbjct:  584 GTLWKKGYLRSKSQMEKDFKSLELMIASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDI 751          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.058e-20
Identity = 59/142 (41.55%), Postives = 85/142 (59.86%), Query Frame = 3
Query:  261 LMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQ-DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLL------HPADDTGKS-VDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            L  AT+ FS+NN +G G  G +YK +L + T + VKRL  +S +  +EF  E+  +  ++++NLV LLGFC+ + E++LVY+ +PN SL   L      H  D T KS +DW RR  I  G  RG  +LH +    IIHR+I
Sbjct:  314 LEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDI 455          
The following BLAST results are available for this feature:
BLAST of CX296622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
NORK_PEA2.132e-2139.58Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
WAKLI_ARATH2.785e-2132.98Wall-associated receptor kinase-like 22 OS=Arabido... [more]
Y5516_ARATH3.637e-2139.57Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
Y5343_ARATH3.637e-2139.13Probable LRR receptor-like serine/threonine-protei... [more]
KPRO_MAIZE3.637e-2137.78Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
Y5344_ARATH4.750e-2138.41Probable LRR receptor-like serine/threonine-protei... [more]
Y5005_ARATH4.750e-2135.57Probable receptor-like protein kinase At5g20050 OS... [more]
CRK13_ARATH6.204e-2133.33Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
Y1534_ARATH8.103e-2136.90Probable LRR receptor-like serine/threonine-protei... [more]
CRK32_ARATH1.058e-2041.55Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC05146H12SK FerrChloL1 Citrus clementina cDNA clone C05146H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296622 ID=CX296622; Name=CX296622; organism=Citrus clementina; type=EST; length=665bp
GAGGCCTCGTGCCGAATTCGGCACGAGGGAACTTCAAGGGCCCTCACACT
GGAGTCATTGCTGGGGCAGCAATTGGCGGGGTGACTTTCGCAGCATTGGT
TGTGGGTATTGTTATGTTCTTCTATTTCCGTAGAATGTCTATGAGGAAGA
AGAAGGATGATGATCCTGAAGGAAACAAATGGGCGAAGAGCTTGACAGGA
GCCAAAGGCATTAAGGTTTCCTTGTTTGAGAAGTCAATTACTAAAATGAG
ATTAAGTGATCTCATGAAGGCTACCAACAGCTTCAGCAAAAACAATATTA
TTGGGTCAGGAAGAACTGGGACAATGTACAAAGCATTGCTTGAAGATGGC
ACGCCACTTATGGTAAAGAGGTTGCAGGATTCACAACGTTCTGAGAAAGA
ATTTGTGGCTGAGATGGCTACTCTGGGAAGTGTGAAAAATCGTAACTTAG
TTCCGCTTTTAGGTTTTTGCATGGCTAAGAAGGAGAGGCTTTTGGTTTAC
AAGCACATGCCAAATGGTAGCCTTTATGATCTTTTACATCCCGCTGATGA
CACTGGCAAGAGTGTGGATTGGCCACGGAGGCTCNAAATAGCTATAGGGG
CAGCTAGAGGATTTGCCTGGCTACATCATAACTGCAATCCTCTTATTATT
CACCGAAATATTAGC
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