CX296622

Overview
NameCX296622
Unique NameCX296622
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.058e-20
Identity = 55/141 (39.01%), Postives = 84/141 (59.57%), Query Frame = 3
Query:  249 RLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            RLS+L  ATN F + N +G G  G +YKA+L DG  + VKR   +     + +EF  E+  L ++++ N+V LLG+     ERLLVY++MP+G+L+D LH        + W  R+ IA+  A+G  +LH+   P IIH ++
Sbjct:  509 RLSELKDATNGFKEFNELGRGSYGFVYKAVLADGRQVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDHLHSG---FSPLSWSLRIKIAMQTAKGLEYLHNEAEPRIIHGDV 646          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.382e-20
Identity = 65/181 (35.91%), Postives = 99/181 (54.70%), Query Frame = 3
Query:  147 KKKDDDPEGNK--WAK-----SLTGAKGIKV-SLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQD-SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            KK+  D +GN   W       + + + G  + S+   S  ++ L  + +ATNSF +N  IG G  G +YK  L DGT + VKR    SQ+   EF  E+  L   ++R+LV L+G+C    E +LVY++M NG+L   L+ +     S+ W +RL I IG+ARG  +LH      +IHR++
Sbjct:  429 KKRGRDQDGNSKTWIPLSSNGTTSSSNGTTLASIASNSSYRIPLVAVKEATNSFDENRAIGVGGFGKVYKGELHDGTKVAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLL--SLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDV 607          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.382e-20
Identity = 53/144 (36.81%), Postives = 88/144 (61.11%), Query Frame = 3
Query:  243 KMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTP--LMVKRLQ-DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPAD-DTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            ++R  DL  AT+ F +N I+G+G  GT+++  L   +   + VK++  +S +  +EF+AE+ +LG ++++NLV L G+C  K + LL+Y ++PNGSL  LL+     +G  + W  R  IA G A G  +LH     ++IHR+I
Sbjct:  348 RLRYKDLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDI 491          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.382e-20
Identity = 57/136 (41.91%), Postives = 84/136 (61.76%), Query Frame = 3
Query:  261 LMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRL-QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLL-HPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            +  ATN F+++N IG G  G +YK    +G  + VKRL ++S++ E EF  E+  +  +++RNLV LLGF +  +ER+LVY++MPN SL  LL  P   T   +DW +R  I  G ARG  +LH +    IIHR++
Sbjct:  346 IQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQT--QLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDL 479          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.382e-20
Identity = 56/133 (42.11%), Postives = 81/133 (60.90%), Query Frame = 3
Query:  270 ATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRL-QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS-VDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            ATN F + N +G G  G +YK +   G  + VKRL + S + E+EF  E+  +  +++RNLV LLGFC+ + ER+LVY+ +PN SL   +   D T +S +DW RR  I  G ARG  +LH +    IIHR++
Sbjct:  347 ATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIF--DSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDL 477          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.805e-20
Identity = 68/189 (35.98%), Postives = 100/189 (52.91%), Query Frame = 3
Query:  144 RKKKDDDPE---------GNKWAKSL--TGAKGIKV--SLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLM-VKRLQ-DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADD-TGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            RKKK ++            + W   L  TG+   K   SL      +  + ++  ATN F +  IIG G  G++YK  ++ G  L+ VKRL+  S +  KEF  E+  L  +++ +LV L+G+C    E +LVY++MP+G+L D L   D  +   + W RRL I IGAARG  +LH      IIHR+I
Sbjct:  466 RKKKSNESSVDTTNKPSTNSSWGPLLHGTGSTNTKSASSLPSDLCRRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDI 654          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.805e-20
Identity = 59/191 (30.89%), Postives = 96/191 (50.26%), Query Frame = 3
Query:   96 LVVGIVMFFYFRRMSMRKKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADD--TGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            L + +V+  + R    R  KD   +  K +    G    K+  FE       L DL++A+       ++G G  GT YK  LED   ++VKR+++    ++EF  ++  +GS+K+ N+  L G+  +K E+L+VY +  +GSL  LLH        K ++W  RL +  G ARG A +H      ++H NI
Sbjct:  251 LAILLVIIIHNREEQRRSSKDKPSKRRKDSDPNVGEGDNKIVFFEGKNLVFDLEDLLRASAE-----VLGKGPFGTTYKVDLEDSATIVVKRIKEVSVPQREFEQQIENIGSIKHENVATLRGYFYSKDEKLVVYDYYEHGSLSTLLHGQKGLRDRKRLEWETRLNMVYGTARGVAHIHSQSGGKLVHGNI 436          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.805e-20
Identity = 54/150 (36.00%), Postives = 83/150 (55.33%), Query Frame = 3
Query:  255 SDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQ--------------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            S++   TN+F+K  +IG G  G +Y   LEDGT + VK + DS               +  KEF  E   L +V +RNL   +G+C   +   L+Y++M NG+L D L  + +  + + W +RL IAI +A+G  +LHH C P I+HR++
Sbjct:  560 SEVSSITNNFNK--VIGKGGFGIVYLGSLEDGTEIAVKMINDSSFGKSKGSSSSSSSSQVSKEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYL--SSENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDV 705          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.805e-20
Identity = 50/145 (34.48%), Postives = 85/145 (58.62%), Query Frame = 3
Query:  234 SITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSEKE---FVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRN 659
            ++    ++ L + TNSFS  N+IG+G  G++Y+A L  G    V++L     + +E   F+  +  +  +++ N+V L+GFC    +RLL++++  NG+L+DLLH  D     + W  R+ IA+ AA+   +LH  C+P  IHRN
Sbjct:  462 AVKHFTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGKLFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIELSWNVRVRIALEAAKALEYLHEICDPPSIHRN 606          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.805e-20
Identity = 65/200 (32.50%), Postives = 101/200 (50.50%), Query Frame = 3
Query:  111 VMFFYFRRMSMRKKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSE----------------KEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            V +FYF+  + +K +    E +KW                 S  K+  S+  +   S  ++N+IG+G +G +YK +L +G  + VKRL      E                + F AE+ TLG ++++N+V L   C  +  +LLVY++MPNGSL DLLH     G  + W  R  I + AA G ++LHH+  P I+HR+I
Sbjct:  636 VAWFYFKYRTFKKARA--MERSKWTLM--------------SFHKLGFSE-HEILESLDEDNVIGAGASGKVYKVVLTNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLH--SSKGGMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDI 816          
The following BLAST results are available for this feature:
BLAST of CX296622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
ACCR1_ARATH1.058e-2039.01Serine/threonine-protein kinase-like protein CCR1 ... [more]
Y5597_ARATH1.382e-2035.91Probable receptor-like protein kinase At5g59700 OS... [more]
LRKA2_ARATH1.382e-2036.81Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK8_ARATH1.382e-2041.91Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK4_ARATH1.382e-2042.11Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
Y5389_ARATH1.805e-2035.98Probable receptor-like protein kinase At5g38990 OS... [more]
Y5332_ARATH1.805e-2030.89Probable inactive receptor kinase At5g53320 OS=Ara... [more]
Y4291_ARATH1.805e-2036.00Probable LRR receptor-like serine/threonine-protei... [more]
SRF1_ARATH1.805e-2034.48Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
HSL1_ARATH1.805e-2032.50Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC05146H12SK FerrChloL1 Citrus clementina cDNA clone C05146H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296622 ID=CX296622; Name=CX296622; organism=Citrus clementina; type=EST; length=665bp
GAGGCCTCGTGCCGAATTCGGCACGAGGGAACTTCAAGGGCCCTCACACT
GGAGTCATTGCTGGGGCAGCAATTGGCGGGGTGACTTTCGCAGCATTGGT
TGTGGGTATTGTTATGTTCTTCTATTTCCGTAGAATGTCTATGAGGAAGA
AGAAGGATGATGATCCTGAAGGAAACAAATGGGCGAAGAGCTTGACAGGA
GCCAAAGGCATTAAGGTTTCCTTGTTTGAGAAGTCAATTACTAAAATGAG
ATTAAGTGATCTCATGAAGGCTACCAACAGCTTCAGCAAAAACAATATTA
TTGGGTCAGGAAGAACTGGGACAATGTACAAAGCATTGCTTGAAGATGGC
ACGCCACTTATGGTAAAGAGGTTGCAGGATTCACAACGTTCTGAGAAAGA
ATTTGTGGCTGAGATGGCTACTCTGGGAAGTGTGAAAAATCGTAACTTAG
TTCCGCTTTTAGGTTTTTGCATGGCTAAGAAGGAGAGGCTTTTGGTTTAC
AAGCACATGCCAAATGGTAGCCTTTATGATCTTTTACATCCCGCTGATGA
CACTGGCAAGAGTGTGGATTGGCCACGGAGGCTCNAAATAGCTATAGGGG
CAGCTAGAGGATTTGCCTGGCTACATCATAACTGCAATCCTCTTATTATT
CACCGAAATATTAGC
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