CX296628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: FDH_ARATH (Formate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=FDH1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14 Identity = 49/156 (31.41%), Postives = 77/156 (49.36%), Query Frame = -3 Query: 242 GNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCH--EDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVT 703 G IG L +RL+PFG ++ H ++ + +L E G ED+ + DV+V + L ++T G+ NK + +KKG L+VN ARG +++ +A+ +ESGH+GG DV +P + P N +TPH G T Sbjct: 206 GRIGKLLLQRLKPFGCNLLY-------HDRLQ-----------MAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTT 343
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: SERA_SHIFL (D-3-phosphoglycerate dehydrogenase OS=Shigella flexneri GN=serA PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 46/126 (36.51%), Postives = 71/126 (56.35%), Query Frame = -3 Query: 155 SMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPND----PILKFKNVLITPHVGGVTEHSYRSMA-KVVGDVALQLHAGTPLTGLEF 517 +M+DVV + N T ++ +S MK GSLL+N +RG ++D A+ L S HL G IDV TEP +D P+ +F NVL+TPH+GG T+ + ++ +V G + G+ L+ + F Sbjct: 202 NMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNF 327
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: SERA_ECOLI (D-3-phosphoglycerate dehydrogenase OS=Escherichia coli (strain K12) GN=serA PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 46/126 (36.51%), Postives = 71/126 (56.35%), Query Frame = -3 Query: 155 SMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPND----PILKFKNVLITPHVGGVTEHSYRSMA-KVVGDVALQLHAGTPLTGLEF 517 +M+DVV + N T ++ +S MK GSLL+N +RG ++D A+ L S HL G IDV TEP +D P+ +F NVL+TPH+GG T+ + ++ +V G + G+ L+ + F Sbjct: 202 NMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNF 327
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: SERA_ECOL6 (D-3-phosphoglycerate dehydrogenase OS=Escherichia coli O6 GN=serA PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 46/126 (36.51%), Postives = 71/126 (56.35%), Query Frame = -3 Query: 155 SMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPND----PILKFKNVLITPHVGGVTEHSYRSMA-KVVGDVALQLHAGTPLTGLEF 517 +M+DVV + N T ++ +S MK GSLL+N +RG ++D A+ L S HL G IDV TEP +D P+ +F NVL+TPH+GG T+ + ++ +V G + G+ L+ + F Sbjct: 202 NMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNF 327
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: SERA_ECO57 (D-3-phosphoglycerate dehydrogenase OS=Escherichia coli O157:H7 GN=serA PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 46/126 (36.51%), Postives = 71/126 (56.35%), Query Frame = -3 Query: 155 SMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPND----PILKFKNVLITPHVGGVTEHSYRSMA-KVVGDVALQLHAGTPLTGLEF 517 +M+DVV + N T ++ +S MK GSLL+N +RG ++D A+ L S HL G IDV TEP +D P+ +F NVL+TPH+GG T+ + ++ +V G + G+ L+ + F Sbjct: 202 NMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNF 327
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 51/165 (30.91%), Postives = 87/165 (52.73%), Query Frame = -3 Query: 209 GNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVTEHSYRSMAKVV 703 G IG +A+R + FG++I+ R+ ++ ++L E E++ K +D VV + L K+T ++ + L MK ++LVNIARG ++D EA+ L+ G + G G+DV EP+ N+ + KNV++ PH+G T + MA++V Sbjct: 159 GRIGQAVARRAKGFGMRILYYSRTRKPEAE---------------EELKAEFKPLEELLK---ESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALIKALKEGWIAGAGLDVFEEEPY-YNEELFSLKNVILAPHIGSATFGAREGMAELV 304
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 49/165 (29.70%), Postives = 85/165 (51.52%), Query Frame = -3 Query: 209 GNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVTEHSYRSMAKVV 703 G IG +A+R + FG++I+ R+ + + + +D+L+ E +D VV + L K+T ++N+ L MK ++LVNIARG ++D EA+ L G + G G+DV EP+ ++ + NV++ PH+G T + MA++V Sbjct: 159 GRIGQAIARRAKGFGMRILYNSRTRKPEVEKELGAEFMP-----LDELLKE-------------SDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEEPY-YHEELFSLDNVVLAPHIGSATYGAREGMAELV 304
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: GYAR_KORCO (Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 47/176 (26.70%), Postives = 90/176 (51.14%), Query Frame = -3 Query: 179 LGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVTEHSYRSMAKVVGDVALQLHAG 706 +G IG +A+R + FG++I+ + + L V+ ++ L++E +D V + L ++T ++ + L MK+ ++LVN +RG ++D +A+ L+ G + G G+DV EP P+DP+LK +NV++ PH + + MA++V + + G Sbjct: 155 MGRIGAAVARRAKGFGMRIL-----YYDSIRREDFEKELGVEYVPLEKLLEE-------------SDFVSLHVPLTEETYHMIGEEQLRRMKRTAILVNTSRGKVVDQKALYKALKEGWIAGAGLDVFEQEPIPPDDPLLKLENVVLAPHAASASHETRSRMAEMVAENLIAFKRG 312
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14 Identity = 49/166 (29.52%), Postives = 82/166 (49.40%), Query Frame = -3 Query: 209 GNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGC-HEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVTEHSYRSMAKVV 703 G IG LAKR + FG+KII R+ ++ +E G + D +D + + L K+T ++ + L MK ++L+N +RG ++D A+ L+ G + G G+DV EP+ N+ + K KNV++ PH+G T + MA++V Sbjct: 159 GRIGQALAKRAKGFGMKIIYYSRTRKPEAE-------------------EEIGAEYVDFETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNAILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEPY-YNEELFKLKNVVLAPHIGSATHEAREGMAELV 304
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: FDH_NEUCR (Formate dehydrogenase OS=Neurospora crassa GN=fdh PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14 Identity = 52/162 (32.10%), Postives = 80/162 (49.38%), Query Frame = -3 Query: 242 LGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHE--DIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVL-----ITPHVGGVT 706 +G IG + +RL+PF K + + + +S + A E GC D+ + + DVV L+++T G+ NK +S MKKGS LVN ARG ++ E +A L+SGHL G G DV + +P + P+ KN + PH+ G + Sbjct: 173 VGRIGERVLRRLKPFDCKELL----YYDYQPLSAEKEA-------------EIGCRRVADLEEMLAQCDVVTINCPLHEKTQGLFNKELISKMKKGSWLVNTARGAIVVKEDVAEALKSGHLRGYGGDVWFPQPAPQDHPLRYAKNPFGGGNAMVPHMSGTS 317 The following BLAST results are available for this feature:
BLAST of CX296628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296628 ID=CX296628; Name=CX296628; organism=Citrus clementina; type=EST; length=708bpback to top |