CX296628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: FDH_SOLTU (Formate dehydrogenase, mitochondrial OS=Solanum tuberosum GN=FDH1 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 47/154 (30.52%), Postives = 77/154 (50.00%), Query Frame = -3 Query: 242 GNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVT 703 G IG L +RL+PF ++ H ++ S +++ + K ED+ K S D+VV L ++T G+ +K ++ +KKG L+VN ARG ++D +A+ SGH+ G DV + +P + P N +TPH+ G T Sbjct: 203 GRIGRLLLQRLKPFNCNLLY-------HDRLKMDSE--------LENQIGAK-FEEDLDKMLSKCDIVVINTPLTEKTKGMFDKERIAKLKKGVLIVNNARGAIMDTQAVVDACNSGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPHISGTT 340
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: SERA_MYCTU (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis GN=serA PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 54/174 (31.03%), Postives = 88/174 (50.57%), Query Frame = -3 Query: 188 LGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVT-EHSYRSMAKVVGDVALQL 706 LG IG +A+R+ FG ++A + +++ L ++ +DDL+ + AD + L +TAG+++K L+ K G ++VN ARGGL+D A+A + GH+ G+DV TEP + P+ + V++TPH+G T E R+ V V L L Sbjct: 149 LGRIGQLVAQRIAAFGAYVVAYDPYVSP-----ARAAQLGIELLSLDDLL-------------ARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPC-TDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLAL 303
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: SERA_MYCBO (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium bovis GN=serA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 54/174 (31.03%), Postives = 88/174 (50.57%), Query Frame = -3 Query: 188 LGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVT-EHSYRSMAKVVGDVALQL 706 LG IG +A+R+ FG ++A + +++ L ++ +DDL+ + AD + L +TAG+++K L+ K G ++VN ARGGL+D A+A + GH+ G+DV TEP + P+ + V++TPH+G T E R+ V V L L Sbjct: 149 LGRIGQLVAQRIAAFGAYVVAYDPYVSP-----ARAAQLGIELLSLDDLL-------------ARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPC-TDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLAL 303
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: GYAR_AERPE (Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 48/168 (28.57%), Postives = 80/168 (47.62%), Query Frame = -3 Query: 203 LGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVTEHSYRSMAKVVGD 706 +G IG +A+ + FG++II RS + L + ++DL+ E +D++ L L +T ++ +S L MKK ++LVN RG ++D A+ L G + +DV EP +PN P+ FKNV++ PH T + MA + + Sbjct: 159 MGRIGSRVAEIGKAFGMRIIYHSRSRKREIE-----KELGAEYRSLEDLLRE-------------SDILSIHLPLTDETRHLIGESELKLMKKTAILVNTGRGAIVDTGALVKALREGWIAAAALDVFEEEPLNPNHPLTAFKNVVLAPHAASATRETRLRMAMMAAE 308
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: FDH_HORVU (Formate dehydrogenase, mitochondrial OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 53/170 (31.18%), Postives = 80/170 (47.06%), Query Frame = -3 Query: 200 GNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGC--HEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVTEHSYRSMAKVVGDV 703 G G L +RL+PF ++ H ++ I +L E G ED+ DVVV L ++T G+ NK ++ MKKG ++VN ARG ++D +A+A SGH+ G G DV + +P + P N +TPH+ G T + A V D+ Sbjct: 199 GRYGRLLLQRLKPFNCNLLY-------HDRLQ-----------INPELEKEIGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMFNKEKIAKMKKGVIIVNNARGAIMDTQAVADACSSGHIAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRYAAGVKDM 350
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: FDH2_ORYSJ (Formate dehydrogenase 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os06g0486900 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 52/156 (33.33%), Postives = 75/156 (48.08%), Query Frame = -3 Query: 242 GNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGC--HEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVT 703 G IG L +RL+PF ++ H +V I +L E G ED+ DVVV + L ++T G+ NK ++ MKKG +VN ARG ++D +A+A SGH+ G G DV + +P + P N +TPH G T Sbjct: 200 GRIGRLLLQRLKPFNCNLMY-------HDRVK-----------IDPELEKEIGAKYEEDLDAMLPKCDVVVINMPLTEKTRGMFNKERIAKMKKGVTIVNNARGAIMDTQAVADACASGHVAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHCSGTT 337
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: SERA_METJA (D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 51/168 (30.36%), Postives = 84/168 (50.00%), Query Frame = -3 Query: 203 LGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVTEHSYRSMAKVVGD 706 LG IG ++ KR + FG+ II +A G+ +LVD DI + AD + + L +T I+ + ++ MKK +++VN ARGGL+D +A+ L+ G + +DV EP ++P+L NV+ TPH G TE + ++ +V + Sbjct: 147 LGRIGQQVVKRAKAFGMNIIGYDPYIPKE---------VAESMGV--ELVD------DINELCKRADFITLHVPLTPKTRHIIGREQIALMKKNAIIVNCARGGLIDEKALYEALKEGKIRAAALDVFEEEP-PKDNPLLTLDNVIGTPHQGASTEEAQKAAGTIVAE 296
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: YPRB2_CORML (Uncharacterized protein in proB 3'region OS=Corynebacterium melassecola PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 50/155 (32.26%), Postives = 69/155 (44.52%), Query Frame = -3 Query: 239 GNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVTE 703 G IGV L + L+PF VK IA S G + DE + + ADV V L L T IVN L MK ++LVN+ RG L++ + + L +G + G +DV EP + P+ + NV+ITPH E Sbjct: 135 GGIGVRLLEMLKPFNVKTIAVNNS------------------GRPVEGADETFAMDKAEHVWAEADVFVLILPLTDATYQIVNAETLGKMKPSAVLVNVGRGPLINTDDLVDALNNGTIAGAALDVTDPEPLPDSHPLWEMDNVVITPHTANTNE 271
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: FDH1_ORYSJ (Formate dehydrogenase 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os06g0486800 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 52/170 (30.59%), Postives = 80/170 (47.06%), Query Frame = -3 Query: 200 GNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGC--HEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVTEHSYRSMAKVVGDV 703 G IG L +RL+PF ++ H ++ I +L E G ED+ DV+V L ++T G+ NK ++ MKKG ++VN ARG ++D +A+A SG + G G DV + +P + P N +TPH+ G T + A V D+ Sbjct: 198 GRIGRLLLQRLKPFNCNLLY-------HDRLK-----------IDPELEKEIGAKYEEDLDAMLPKCDVIVINTPLTEKTRGMFNKERIAKMKKGVIIVNNARGAIMDTQAVADACSSGQVAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRYAAGVKDM 349
BLAST of CX296628 vs. ExPASy Swiss-Prot
Match: SERA_SYNY3 (D-3-phosphoglycerate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=serA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 50/179 (27.93%), Postives = 84/179 (46.93%), Query Frame = -3 Query: 173 LGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCH-EDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGGLGIDVAWTEPFDPNDPILKFKNVLITPHVGGVTEHSYRSMAKVVGDVALQLHAGTP 706 LG IG +A + G+K+ LA I + D+ GC D+ S AD + + +TA ++N L+ MK + ++N +RGG++D EA+ +E+ +GG +DV EP + +F NV++TPH+G TE + ++A V + + G P Sbjct: 175 LGKIGSHVAGVAKAMGMKL-------------------LAYDPFISQERADQIGCTLVDLDLLFSEADFITLHIPKTPETANLINAETLAKMKPTARIINCSRGGIIDEEALVTAIETAQIGGAALDVFAQEPLG-ESRLREFSNVILTPHLGASTEEAQVNVAVDVAEQIRDVLLGLP 333 The following BLAST results are available for this feature:
BLAST of CX296628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296628 ID=CX296628; Name=CX296628; organism=Citrus clementina; type=EST; length=708bpback to top |