CX296634

Overview
NameCX296634
Unique NameCX296634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX296634_ssr346 microsatellite CX296634_ssr346:346..363. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10970 contig Ccv1_Contig10970:8..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 9.378e-66
Identity = 128/233 (54.94%), Postives = 154/233 (66.09%), Query Frame = 3
Query:   36 NDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------VSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            N+D+ Y WES AGG+FTVT     +L  RGT+I LHLKEDQ EYLEERRLKDLIKKHSEFI Y I L +                                                  V  E+ + NK KP+W R P+++TKEEYA+FYK+++NDWEE L+ KHFSVEGQLEF+AILF+PKRAPFD+F+  KK NNIKLYVRRVFIMDNCE+L PE+LGF++G+VDSEDLPL
Sbjct:  140 NEDDAYTWESSAGGTFTVTSTPDCDLK-RGTRIVLHLKEDQQEYLEERRLKDLIKKHSEFIGYDIELMVENTTEKEVTDEDEDEEAAKKAEEGEEPKVEEVKDGVDADAKKKKTKKVKEVKQEFVVQNKHKPLWTRDPKDVTKEEYASFYKAISNDWEEQLSTKHFSVEGQLEFRAILFLPKRAPFDMFEPNKKRNNIKLYVRRVFIMDNCEDLCPEWLGFLRGVVDSEDLPL 371          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 1.225e-65
Identity = 125/229 (54.59%), Postives = 153/229 (66.81%), Query Frame = 3
Query:   36 NDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSH---EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            N DE Y+WES A G+FT+T     ++  RGT+ITLHLKEDQ+EYLE RRLK+LIKKHSEFI Y I L +                                           V     E+ + NK KP+W R P+++TKEEYAAFYK+++NDWE+  A KHFSVEGQLEF++I+FVPKRAPFD+F+  KK NNIKLYVRRVFIMDNCE+L P++LGFVKG+VDSEDLPL
Sbjct:  140 NSDESYVWESSACGTFTITSTPESDMK-RGTRITLHLKEDQMEYLEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADEDEEPKVEEVREGDEGEKKKTKKVKEVTKEYEVQNKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPRATKHFSVEGQLEFRSIMFVPKRAPFDMFEPNKKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGVVDSEDLPL 367          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HSP90_CAEEL (Heat shock protein 90 OS=Caenorhabditis elegans GN=daf-21 PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.564e-65
Identity = 122/226 (53.98%), Postives = 152/226 (67.26%), Query Frame = 3
Query:   36 NDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            NDD+ Y WES AGGSF V      E+  RGTKI +H+KEDQ+++LEER++K+++KKHS+FI YPI L +                                              E   +NK KPIW R P++I+ EEYA FYKSL+NDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ +K  N+IKLYVRRVFIM+NCEEL+PEYL F+KG+VDSEDLPL
Sbjct:  143 NDDDSYQWESSAGGSFVVRPFNDPEVT-RGTKIVMHIKEDQIDFLEERKIKEIVKKHSQFIGYPIKLVVEKEREKEVEDEEAVEAKDEEKKEGEVENVADDADKKKTKKIKEKYFEDEELNKTKPIWTRNPDDISNEEYAEFYKSLSNDWEDHLAVKHFSVEGQLEFRALLFVPQRAPFDLFENKKSKNSIKLYVRRVFIMENCEELMPEYLNFIKGVVDSEDLPL 367          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.037e-64
Identity = 126/238 (52.94%), Postives = 156/238 (65.55%), Query Frame = 3
Query:   30 QANDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQ----------KPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            ++NDDEQYIWES AGGSFTVT D   E +GRGT + L LK+DQLEYLEE+R+K++IK+HSEF++YPI L +                                              +   V ++          KP+W R P +IT+EEY AFYKS++NDWE+ L VKHFSVEGQLEF+AILF+PKRAPFDLF+++KK NNIKLYVRRVFI D  E+LIPE+L FVKG+VDSEDLPL
Sbjct:  139 KSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDDKKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPL 376          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.721e-64
Identity = 125/233 (53.65%), Postives = 154/233 (66.09%), Query Frame = 3
Query:   30 QANDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLV-----NKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            ++NDDEQYIWES AGG+F VT+D  G  +GRGTK+ LHLK++Q EYL E ++K+++KK SEFI YPI L +                                              + + +     NK KPIW R P +IT+EEYA+FYK  TNDWE+HLAVKHFSVEGQLEF+AILFVPKRAPFDLF+T+K  NNIKLYVRRVFI D+  +LIPE+L F+KG+VDSEDLPL
Sbjct:  139 KSNDDEQYIWESNAGGTFKVTQDDDGRAIGRGTKMILHLKDEQTEYLNESKIKEVVKKQSEFIFYPIYLHVLKENEKEVPDEDAEEVKDEGDDKAPKVEEVDEDEEDKTKAKKTKKIKENKIEEEELNKTKPIWTRNPADITQEEYASFYK--TNDWEDHLAVKHFSVEGQLEFRAILFVPKRAPFDLFETKKTKNNIKLYVRRVFITDDATDLIPEWLSFIKGVVDSEDLPL 369          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.146e-63
Identity = 124/230 (53.91%), Postives = 151/230 (65.65%), Query Frame = 3
Query:   36 NDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----VSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            N DE Y+WES AGG+FT+T     ++     +ITLHLKEDQLEYLE RRLK+LIKKHSEFI Y I L +                                               V+ E+ + NK KP+W R P+++TKEEYAAFYK+++NDWE+  A KHFSVEGQLEF+AI+FVPKRAPFD+ +  KK NNIKLYVRRVFIMDNCE+L P++LGFVKG+VDSEDLPL
Sbjct:  140 NSDEVYVWESSAGGTFTITSAPESDMK-LPARITLHLKEDQLEYLEARRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEEAKKADEDGEEPKVEEVTEGEEGKKKKTKKVKEVTKEYEVQNKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPPATKHFSVEGQLEFRAIMFVPKRAPFDMLEPNKKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGVVDSEDLPL 368          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.554e-63
Identity = 122/230 (53.04%), Postives = 152/230 (66.09%), Query Frame = 3
Query:   36 NDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSL----VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            NDD+ Y WES AGGSF V      EL  RGTKIT+++KEDQ+++LEER++K+++KKHS+FI YPI L +                                              E       +NK KPIW R P++I+ EEYA FYKSL+NDWE+HLAVKHFSVEGQLEF+A+LF P+RAPFDLF+ +K  N+IKLYVRRVFIM+NCEEL+PEYL F+KG+VDSEDLPL
Sbjct:  143 NDDDSYQWESSAGGSFVVRPYNDPELT-RGTKITMYIKEDQVDFLEERKIKEIVKKHSQFIGYPIKLVVEKEREKEVEDEEAVESKDEEKKEGDVENVGEDADAEKDKKKTKKIKEKYFEDEELNKTKPIWTRNPDDISNEEYAEFYKSLSNDWEDHLAVKHFSVEGQLEFRALLFAPQRAPFDLFENKKSKNSIKLYVRRVFIMENCEELMPEYLNFIKGVVDSEDLPL 371          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 3.336e-63
Identity = 132/247 (53.44%), Postives = 154/247 (62.35%), Query Frame = 3
Query:   36 NDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKE---------------------EYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            N D+QY+WES A G FTV +D S E L RGT++ LHLKEDQ EYLEERRLK+L+KKHSEFIS+PISL +                                              E     K+K    RK   +T+E                     EYAAFYK+LTNDWE+HLAVKHFSVEGQLEFKA+LFVP+RAPFD+F++RKK NNIKLYVRRVFIMD+CEELIPE+L FVKG+VDSEDLPL
Sbjct:  148 NADDQYVWESTASGHFTVKKDDSHEPLKRGTRLILHLKEDQTEYLEERRLKELVKKHSEFISFPISLSVEKTQETEVTDDEAELDEDKKPEEEKPKDDKVEDVTDEKVTDVTDEEEKKEEKKKK---KRKVTNVTREWEMLNKQKPIWMRLPSEVTNEEYAAFYKNLTNDWEDHLAVKHFSVEGQLEFKALLFVPRRAPFDMFESRKKKNNIKLYVRRVFIMDDCEELIPEWLSFVKGVVDSEDLPL 391          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.291e-62
Identity = 125/228 (54.82%), Postives = 151/228 (66.23%), Query Frame = 3
Query:   36 NDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIW--MRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            NDDEQY WES AGGSFTV  D  GE +GRGTK+ LHLKEDQ EYLEERR+K+++KKHS+FI YPI+L++                                              E    +++KP    +   EE   +EY  FYKSLT+DWE+HLAVKHFSVEGQLEF+A+LF P+RAPFDLF+ +KK NNIKLYVRRVFIMD+C+ELIPEYL F+ G+VDSEDLPL
Sbjct:  129 NDDEQYAWESSAGGSFTVHAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEQDKEISDDEAEEEKGE-------------------------KEEEDKDDEEKPKIKDVGSDEEDDSKEYGEFYKSLTSDWEDHLAVKHFSVEGQLEFRALLFSPRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIHGVVDSEDLPL 330          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.888e-60
Identity = 115/168 (68.45%), Postives = 121/168 (72.02%), Query Frame = 3
Query:  210 EFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            EFISYPI LW                                            VSHEW L+NKQKPIW+RKPEEITK+EYA+FYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPEYLGFVKG+VDS+DLPL
Sbjct:    1 EFISYPIYLWTEKTTEKEISDDEDDEPKKDEEGAVEEVDEDKEKEKGKKKKIKEVSHEWQLINKQKPIWLRKPEEITKDEYASFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPL 168          
The following BLAST results are available for this feature:
BLAST of CX296634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
HSP83_TRYBB9.378e-6654.94Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSP83_LEIIN1.225e-6554.59Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSP90_CAEEL3.564e-6553.98Heat shock protein 90 OS=Caenorhabditis elegans GN... [more]
HSP82_YEAST1.037e-6452.94ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSP82_AJECA6.721e-6453.65Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
HSP83_LEIAM1.146e-6353.91Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HSP90_CAEBR2.554e-6353.04Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
HSP90_THEPA3.336e-6353.44Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
H90B3_HUMAN6.291e-6254.82Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
HSP82_TOBAC5.888e-6068.45Heat shock protein 82 (Fragment) OS=Nicotiana taba... [more]

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Properties
Property NameValue
Genbank descriptionC05801B01SK FerrChloL1 Citrus clementina cDNA clone C05801B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296634 ID=CX296634; Name=CX296634; organism=Citrus clementina; type=EST; length=714bp
TTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCCAACGATGATGAGCAG
TACATCTGGGAGTCTCAGGCCGGTGGATCATTCACTGTTACCAGGGACAC
TTCTGGTGAGCTTCTTGGCCGCGGTACAAAGATCACTCTCCACCTCAAGG
AAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATTTGATTAAG
AAGCACTCTGAGTTCATTAGTTACCCAATTTCCCTCTGGATTGAGAAGAC
CACTGAGAAGGAGATTTCTGATGATGAGGACGAGGAAGAAAAGAAGGATG
AGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAGAGAAG
AAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTGAACAA
GCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAAGAAGAGT
ATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACTTGGCT
GTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATCCTCTT
TGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAAGCCCA
ATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACTGTGAG
GAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGA
GGATCTCCCTCTTA
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