CX296634

Overview
NameCX296634
Unique NameCX296634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX296634_ssr346 microsatellite CX296634_ssr346:346..363. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10970 contig Ccv1_Contig10970:8..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: ENPL_CHICK (Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.444e-42
Identity = 94/230 (40.87%), Postives = 132/230 (57.39%), Query Frame = 3
Query:   36 NDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSH--EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            N+D Q+IWES +   F+V  D  G  LGRGT ITL LKE+  +YLE   +K+L+KK+S+FI++PI +W                                                 +W L+N  KPIW R  +E+ ++EY AFYK+ + + ++ +A  HF+ EG++ FK+ILFVP  AP  LFD    KK + IKLYVRRVFI D+  +++P+YL FVKG+VDS+DLPL
Sbjct:  215 NNDTQHIWESDSN-EFSVIDDPRGNTLGRGTTITLVLKEEASDYLELDTVKNLVKKYSQFINFPIYVWSSKTETVEEPVEEEEAKEEKEETDDNEAAVEEEEEEKKPKTKKVEKTVWDWELMNDIKPIWQRPSKEVEEDEYKAFYKTFSKEHDDPMAYIHFTAEGEVTFKSILFVPNSAPRGLFDEYGSKKSDFIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPL 443          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 94/230 (40.87%), Postives = 130/230 (56.52%), Query Frame = 3
Query:   36 NDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSH--EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            N+D Q+IWES +   F+V  D  G  LGRGT ITL LKE+  +YLE   +K+L+KK+S+FI++PI +W                                                 +W L+N  KPIW R  +E+ ++EY AFYKS + + ++ +A  HF+ E +  FK+ILFVP  AP  LFD    KK + IKLYVRRVFI D+  +++P+YL FVKG+VDS+DLPL
Sbjct:  137 NNDTQHIWESDSN-EFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTETVEEPAGEEEAAKEEKEEAVDEAAVEEEEEEKKPKTKKVEKQVWDWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAE-ESTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPL 364          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.572e-39
Identity = 88/219 (40.18%), Postives = 119/219 (54.34%), Query Frame = 3
Query:   57 WESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            W S+A GSFTV      E   RGT ITLHLKEDQ E+L E RL+ LI ++S+++ +PI L +                                                 +VNK   +W R   EIT E+Y  FYK LT+DWE  LA  HF  +G  +F  +LFVPK+ PFDL    ++   ++L+V+RVFIMD CEEL+P++L FV+G++DS+DLPL
Sbjct:  159 WTSEAKGSFTVE---PAERAARGTSITLHLKEDQKEFLGEWRLRSLITQYSDYVGHPIKLQVSKTTGTGDEAK--------------------------------TETSLEVVNKASALWQRSKSEITDEQYQEFYKHLTHDWEAPLAWTHFKADGNTQFTGLLFVPKQPPFDL--DAQQQRGVRLFVKRVFIMDRCEELVPQWLRFVRGVIDSDDLPL 340          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_GEOSL (Chaperone protein htpG OS=Geobacter sulfurreducens GN=htpG PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.273e-38
Identity = 84/219 (38.36%), Postives = 121/219 (55.25%), Query Frame = 3
Query:   57 WESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            WES   G++TV          RGT+ITLHLKE+  EYL+E +++ +++K+S+++ YPI + +                                              E   +N  K IW R   E+T+EEY  FYK +++D+E+ L   H+S EG  EFKA+L++P   PFDLF   +K   ++LYVRRVFI D+CE+L+P+YL FVKG+VDS DLPL
Sbjct:  154 WESTGDGTYTVEECAKET---RGTEITLHLKEEMKEYLDEWKIRSIVRKYSDYVQYPIVMDVTRTEVPKGVNGEEIEGAGTIEKT-----------------------EEETLNSMKAIWTRSKSEVTEEEYEEFYKHVSHDFEKPLKTIHYSAEGTSEFKALLYLPAHKPFDLFMPERK-KGVQLYVRRVFITDSCEQLLPDYLRFVKGVVDSSDLPL 345          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_GEOMG (Chaperone protein htpG OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.407e-37
Identity = 83/219 (37.90%), Postives = 120/219 (54.79%), Query Frame = 3
Query:   57 WESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            WES   G++TV          RGT+ITLHLKE+  EYL+E +++ +++K+S+++ YP+ + +                                                  +N  K IW R   E+T+EEY  FYK +++D+E+ L   H+S EG  EFKA+L++P   PFDLF   +K   ++LYVRRVFI D+CE+LIP+YL FVKG+VDS DLPL
Sbjct:  154 WESTGDGTYTVEEAVKET---RGTEITLHLKEEMKEYLDEWKIRSIVRKYSDYVQYPVVMDVTRTEVPKGVNGEEIEGAGTIEKTVE-----------------------ETLNSMKAIWARAKSEVTEEEYEEFYKHVSHDFEKPLKTIHYSAEGVSEFKALLYLPAHKPFDLFMPERK-KGVQLYVRRVFITDSCEQLIPDYLRFVKGVVDSSDLPL 345          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_PSEHT (Chaperone protein htpG OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.144e-37
Identity = 82/229 (35.81%), Postives = 127/229 (55.46%), Query Frame = 3
Query:   27 RQANDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            R+A +   Y WESQ  G +T+      E  GRGT I LHL+E++ E+ +E RL+ ++ K+S+ IS P+ ++                                            V  EW  +N+   +W R   E++ +EY  FYK ++ DWE+ L+  H  VEG+ E+ ++L++PK+APFDL++ R + + +KLYV+RVFIMD+ E+ +P YL FVKG++DS DLPL
Sbjct:  144 RKAGETTAYEWESQGEGEYTLQEI---EKEGRGTDIILHLREEEKEFADEWRLRSIVTKYSDHISTPVQMY---------------------------KAEVPESEGEDGEKIPAVPGEWESINRATALWTRDKSELSDDEYKEFYKHVSLDWEDPLSWAHNKVEGKTEYTSLLYIPKKAPFDLWN-RDRQSGLKLYVQRVFIMDDAEQFMPSYLRFVKGLLDSNDLPL 341          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.476e-36
Identity = 84/219 (38.36%), Postives = 119/219 (54.34%), Query Frame = 3
Query:   57 WESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            WES   GS+T+   +   L  RGT+I LHLK++  EYLEE +++ ++KK+S++I YP+ + I                                                  +N  K IW R   E+T+EEY  FYK +++D+E      HFS EG  EFKA++++P + PFDLF   +K   ++LYV+RVFI D CEEL+P+YL FVKG+VDS DLPL
Sbjct:  153 WESIGDGSYTIEECS---LDRRGTEIVLHLKDEFKEYLEEWKIRSIVKKYSDYIQYPVVMDITRTETPKGVDGEEIEGAGTIEKTVE-----------------------ETLNSMKAIWARPKSEVTEEEYQEFYKHISHDFENPFNTIHFSAEGISEFKALIYLPAKKPFDLFMADRK-KGLQLYVKRVFITDRCEELLPDYLRFVKGVVDSSDLPL 344          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_SHESW (Chaperone protein htpG OS=Shewanella sp. (strain W3-18-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.540e-36
Identity = 79/224 (35.27%), Postives = 124/224 (55.36%), Query Frame = 3
Query:   42 DEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            DE  +WES+  GSFTV   T      RGT+ITLHL++++ E+ ++ RL+ +I K+S+ IS P+ +W                                                W ++NK   +WMR   EI+ EEY  FYK +++D+ + L   H  VEG+ E+  +L++P +AP+DL++ R + + +KL+V+RVFIMD+ E+ +P YL FV+G++DS DLPL
Sbjct:  149 DEAVLWESEGEGSFTVETITKAS---RGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMW---------------------------QEGTPERDGPDGEKIPATEGYWKVMNKATALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPWDLWN-RDRKHGLKLFVQRVFIMDDAEQFMPSYLRFVQGLIDSNDLPL 341          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPC (Chaperone protein htpG OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=htpG PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.540e-36
Identity = 79/224 (35.27%), Postives = 124/224 (55.36%), Query Frame = 3
Query:   42 DEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            DE  +WES+  GSFTV   T      RGT+ITLHL++++ E+ ++ RL+ +I K+S+ IS P+ +W                                                W ++NK   +WMR   EI+ EEY  FYK +++D+ + L   H  VEG+ E+  +L++P +AP+DL++ R + + +KL+V+RVFIMD+ E+ +P YL FV+G++DS DLPL
Sbjct:  149 DEAVLWESEGEGSFTVETITKAS---RGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMW---------------------------QEGTPERDGPDGEKIPATEGYWKVMNKATALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPWDLWN-RDRKHGLKLFVQRVFIMDDAEQFMPSYLRFVQGLIDSNDLPL 341          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_SHEON (Chaperone protein htpG OS=Shewanella oneidensis GN=htpG PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.540e-36
Identity = 80/224 (35.71%), Postives = 123/224 (54.91%), Query Frame = 3
Query:   42 DEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            +E  +WES+  GSFTV   T      RGT+ITLHL++D+ E+ ++ RL+ +I K+S+ IS P+ +W                                                W  +NK   +WMR   EIT EEY  FYK +++D+ + L   H  VEG+ E+  +L++P +AP+DL++ R + + +KL+V+RVFIMD+ E+ +P YL FV+G++DS DLPL
Sbjct:  149 NEAVLWESEGEGSFTVETITKAT---RGTEITLHLRDDEKEFADDWRLRSIITKYSDHISIPVEMW---------------------------QEGTPERDGPDGEKIPATEGYWKAMNKATALWMRNKSEITDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPWDLWN-RDRKHGLKLFVQRVFIMDDAEQFMPSYLRFVQGLIDSNDLPL 341          
The following BLAST results are available for this feature:
BLAST of CX296634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
ENPL_CHICK9.444e-4240.87Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1[more]
ENPL_RABIT5.182e-4040.87Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]
HTPG_MYXXD2.572e-3940.18Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]
HTPG_GEOSL8.273e-3838.36Chaperone protein htpG OS=Geobacter sulfurreducens... [more]
HTPG_GEOMG2.407e-3737.90Chaperone protein htpG OS=Geobacter metallireducen... [more]
HTPG_PSEHT3.144e-3735.81Chaperone protein htpG OS=Pseudoalteromonas halopl... [more]
HTPG_PELPD3.476e-3638.36Chaperone protein htpG OS=Pelobacter propionicus (... [more]
HTPG_SHESW4.540e-3635.27Chaperone protein htpG OS=Shewanella sp. (strain W... [more]
HTPG_SHEPC4.540e-3635.27Chaperone protein htpG OS=Shewanella putrefaciens ... [more]
HTPG_SHEON4.540e-3635.71Chaperone protein htpG OS=Shewanella oneidensis GN... [more]

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Properties
Property NameValue
Genbank descriptionC05801B01SK FerrChloL1 Citrus clementina cDNA clone C05801B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296634 ID=CX296634; Name=CX296634; organism=Citrus clementina; type=EST; length=714bp
TTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCCAACGATGATGAGCAG
TACATCTGGGAGTCTCAGGCCGGTGGATCATTCACTGTTACCAGGGACAC
TTCTGGTGAGCTTCTTGGCCGCGGTACAAAGATCACTCTCCACCTCAAGG
AAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATTTGATTAAG
AAGCACTCTGAGTTCATTAGTTACCCAATTTCCCTCTGGATTGAGAAGAC
CACTGAGAAGGAGATTTCTGATGATGAGGACGAGGAAGAAAAGAAGGATG
AGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAGAGAAG
AAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTGAACAA
GCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAAGAAGAGT
ATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACTTGGCT
GTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATCCTCTT
TGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAAGCCCA
ATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACTGTGAG
GAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGA
GGATCTCCCTCTTA
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