CX296634

Overview
NameCX296634
Unique NameCX296634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_SHEFN (Chaperone protein htpG OS=Shewanella frigidimarina (strain NCIMB 400) GN=htpG PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.943e-35
Identity = 76/224 (33.93%), Postives = 123/224 (54.91%), Query Frame = 3
Query:   42 DEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            +E  +WES+  GSF V   T  E   RGT+I LHL++++ E+ ++ RL+ +I K+S+ IS P+ +W                                               EW ++NK   +W R   +IT+EEY  FYK +++D+ + L   H  VEG+ E+ ++L++P +AP+D+++ R   + +KL+V+RVFIMD  E+ +P YL FV+G++DS DLPL
Sbjct:  149 NEGVLWESEGEGSFNVESITKNE---RGTEIVLHLRDEETEFADDYRLRSIITKYSDHISVPVQMW---------------------------NEGTPESDGPDGEKVAATEGEWKVMNKATALWTRNKSDITEEEYQEFYKHISHDYSDALKWSHNRVEGKQEYTSLLYIPAKAPWDMWN-RDHKHGLKLFVQRVFIMDEAEQFLPTYLRFVRGLIDSNDLPL 341          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_THICR (Chaperone protein htpG OS=Thiomicrospira crunogena (strain XCL-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.019e-35
Identity = 89/233 (38.20%), Postives = 130/233 (55.79%), Query Frame = 3
Query:   27 RQANDD--EQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSL--VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            R+A DD  E   WES   G +T+    + E   +GT+ITLHLKED  E+L++ RLK +I  +S+ I++PI +W                                             + E SL  VNK   IW +   E++ E+Y  FY+++++D+E  LA  H  VEG LE+ ++L++PK+APFDL+D R +   +KLYV+RVFIMD+ E L+P YL FV+G++DS DLPL
Sbjct:  142 RKAGDDKSEGTRWESAGEGEYTLE---TVEKETKGTEITLHLKEDMDEFLDDFRLKSIITTYSDHINFPIKMW-----------------------------------QVKLDEEGKETEEKSLEQVNKATAIWTQPKSELSDEDYNNFYQTISHDYENPLAHIHNKVEGTLEYTSLLYLPKKAPFDLYD-RDRRYGLKLYVKRVFIMDDAEHLMPTYLRFVRGVIDSNDLPL 335          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_MYCPA (Chaperone protein htpG OS=Mycobacterium paratuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.555e-35
Identity = 84/234 (35.90%), Postives = 128/234 (54.70%), Query Frame = 3
Query:   27 RQANDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLK----EDQL-EYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            R+A + E   WES   G++T+    S E   +GT +TLHLK    ED+L +Y  E ++K L+KK+S+FI++PI + +                                           V+ E   +N  K +W R  +E+++EEY  FYK + + W++ L V     EG  E++A+LF+P  APFDLF+ R     I+LYV+RVFIM +C++L+PEYL FVKG+VD++D+ L
Sbjct:  148 RKAGESEATKWESSGEGTYTIE---SVENAPQGTSVTLHLKPEDTEDELHDYTSEFKIKSLVKKYSDFIAWPIRMEVERRTPATEEGGEET-----------------------------VTREVETLNSMKALWARPKDEVSEEEYKEFYKHIAHAWDDPLEVIAMKAEGTFEYQALLFIPSHAPFDLFN-RDAHTGIQLYVKRVFIMGDCDQLMPEYLRFVKGVVDAQDMSL 348          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_MYCA1 (Chaperone protein htpG OS=Mycobacterium avium (strain 104) GN=htpG PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.555e-35
Identity = 84/234 (35.90%), Postives = 128/234 (54.70%), Query Frame = 3
Query:   27 RQANDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLK----EDQL-EYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            R+A + E   WES   G++T+    S E   +GT +TLHLK    ED+L +Y  E ++K L+KK+S+FI++PI + +                                           V+ E   +N  K +W R  +E+++EEY  FYK + + W++ L V     EG  E++A+LF+P  APFDLF+ R     I+LYV+RVFIM +C++L+PEYL FVKG+VD++D+ L
Sbjct:  148 RKAGESEATKWESSGEGTYTIE---SVENAPQGTSVTLHLKPEDTEDELHDYTSEFKIKSLVKKYSDFIAWPIRMEVERRTPATEEGGEET-----------------------------VTREVETLNSMKALWARPKDEVSEEEYKEFYKHIAHAWDDPLEVIAMKAEGTFEYQALLFIPSHAPFDLFN-RDAHTGIQLYVKRVFIMGDCDQLMPEYLRFVKGVVDAQDMSL 348          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_CHRVO (Chaperone protein htpG OS=Chromobacterium violaceum GN=htpG PE=3 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 6.555e-35
Identity = 85/229 (37.12%), Postives = 122/229 (53.28%), Query Frame = 3
Query:   27 RQANDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            R+A + E   WES   G +T+    S E   RGT+I LHLKE + E L + +LK +I+K+S+ IS PI +                                             VS E   VN    +W R   +I++E+Y  FYK + +D+   LA  H  VEG+ E+  +L++P RAPFDL+D R++   +KLYVRRVFIM++ E+L+P YL FV+G++DS DLPL
Sbjct:  143 RRAGEAEAVRWESHGEGEYTLE---SVEKAERGTEIVLHLKEGEDELLNDWKLKGIIRKYSDHISIPIEM--------------------------------KKGNSYGENGEVIVSDEMEAVNSASALWTRSKNDISEEQYQEFYKHVAHDFTAPLAWSHARVEGRQEYTELLYIPSRAPFDLYD-RERKQGVKLYVRRVFIMEDTEKLMPHYLRFVRGVIDSNDLPL 335          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_RALEJ (Chaperone protein htpG OS=Ralstonia eutropha (strain JMP134) GN=htpG PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.562e-35
Identity = 85/224 (37.95%), Postives = 119/224 (53.12%), Query Frame = 3
Query:   42 DEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            DE   WES   G FTV   T  E   RGT ITLH++E + ++L   RLK +I+K+S+ IS PI +                                              + EW  VN+   +W R   +IT E+Y AFY+ + +D E  L+  H  VEG+ E+  +L++P RAPFDL+D R   + +KLYV+RVFIMD+ E+L+P YL +VKG++DS DLPL
Sbjct:  150 DEAVRWESTGDGEFTVDAITRAE---RGTTITLHMREGEDDFLSAWRLKSIIQKYSDHISLPIRM--------------------------------PKEVWDADTSAYKRTDEWESVNQASALWTRPKSDITDEQYIAFYQHIAHDNEAPLSWTHNRVEGRSEYTQLLYIPARAPFDLWD-RNHKHGLKLYVKRVFIMDDAEQLLPSYLRWVKGVIDSADLPL 337          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_BORA1 (Chaperone protein htpG OS=Bordetella avium (strain 197N) GN=htpG PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.562e-35
Identity = 81/229 (35.37%), Postives = 123/229 (53.71%), Query Frame = 3
Query:   27 RQANDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            R+A  DE   WES   G F++    S E   RGT + LHL+ D+ E+L   +L+++++++S+ IS PI +                                                EW  VN+   +W R   EI+ E+Y  FYK++++ ++E LA  H  VEG+ E+  +L+VP++APFDL+D R     +KLYV+RVFIMD+ E+L+P YL FV+G++DS DLPL
Sbjct:  145 RRAGSDEAIRWESDGQGEFSIA---SAEKATRGTDVVLHLRADEDEFLNGWKLREVLRRYSDHISLPILM--------------------------------RKEEWDADKDEQVTRDEWETVNQANALWTRSKSEISDEQYREFYKTVSHGFDEPLAWTHNRVEGRSEYTQLLYVPRQAPFDLWD-RDARRGVKLYVKRVFIMDDAEQLLPAYLRFVRGVIDSADLPL 337          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_PSYCK (Chaperone protein htpG OS=Psychrobacter cryohalolentis (strain K5) GN=htpG PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.460e-34
Identity = 87/231 (37.66%), Postives = 122/231 (52.81%), Query Frame = 3
Query:   42 DEQYIWESQAGGSFTV---TRDTSGELLGRGTKITLHLKEDQLE----YLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            D+   W S   GSFTV   T++T      RGT ITLHLKE   E    YL+  ++K L+ K+S+ IS PI +                                             ++ EW  +NK   +W R   EI  EEY  FYK++T D +  LA  H  VEG++++  +L++PK+AP DL+ TR++ + +KLYV+RVFIMD  E+L+P YL FVKG++DS DLPL
Sbjct:  169 DKGVRWVSDGTGSFTVEPITKET------RGTAITLHLKEQYSEGEESYLDRGKIKQLVNKYSDHISLPIQM----------------------RKEVWQEDEVEEGSDTPANGQMVLTDEWETINKASALWTRSASEIEDEEYIDFYKNITYDMDAPLAWTHNRVEGRVQYTQLLYIPKKAPVDLY-TREQQHGLKLYVKRVFIMDEAEQLLPMYLRFVKGVIDSADLPL 370          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_NOCFA (Chaperone protein htpG OS=Nocardia farcinica GN=htpG PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.491e-34
Identity = 85/234 (36.32%), Postives = 127/234 (54.27%), Query Frame = 3
Query:   27 RQANDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLK----EDQL-EYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            R+A +     WES AG S     D +     +GT ++LHLK    ED L +Y +E +L++++KK+S+FI++PI + +                                              E   +N +K +W R   E++ EEY  FYK +++ W+E L +     EG  E++A+LF+P +APFDLF TR+    ++LYV+RVFIMDNCEEL+PEYL FVKG+VD++DL L
Sbjct:  145 RKAGETGGTRWESSAGSSTYTIEDLAEA--PQGTAVSLHLKPADEEDHLYDYTQEWKLREIVKKYSDFIAWPIRMQVERTVTEGEGEDKQEKTIV----------------------------EEQTLNSRKALWTRPRGEVSDEEYKEFYKHVSHAWDEPLEIIPLKAEGTFEYQALLFLPSQAPFDLF-TREHKRGVQLYVKRVFIMDNCEELMPEYLRFVKGVVDAQDLSL 347          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_RALME (Chaperone protein htpG OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=htpG PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.253e-34
Identity = 83/224 (37.05%), Postives = 119/224 (53.12%), Query Frame = 3
Query:   42 DEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            DE   WES   G F++      E   RG+ ITLHL+E + ++L   RL+++I+K+S+ IS PI +                                             V+ EW  VN+   +W R   +IT E+Y AFY+ + +D E  LA  H  VEG+ E+  +L++P RAPFDL+D   K   +KLYV+RVFIMD+ ++L+P YL +VKG+VDS DLPL
Sbjct:  150 DEAVRWESAGDGEFSIDAINRAE---RGSTITLHLREGEDDFLSSYRLQNIIRKYSDHISLPIRM--------------------------------PKEEWDAEAQQQKVTGEWESVNQASALWTRSKSDITDEQYQAFYQHIAHDHEAPLAWTHNRVEGRSEYTQLLYIPARAPFDLWDRNHKA-GLKLYVKRVFIMDDADQLLPAYLRWVKGVVDSADLPL 337          
The following BLAST results are available for this feature:
BLAST of CX296634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
HTPG_SHEFN2.943e-3533.93Chaperone protein htpG OS=Shewanella frigidimarina... [more]
HTPG_THICR5.019e-3538.20Chaperone protein htpG OS=Thiomicrospira crunogena... [more]
HTPG_MYCPA6.555e-3535.90Chaperone protein htpG OS=Mycobacterium paratuberc... [more]
HTPG_MYCA16.555e-3535.90Chaperone protein htpG OS=Mycobacterium avium (str... [more]
HTPG_CHRVO6.555e-3537.12Chaperone protein htpG OS=Chromobacterium violaceu... [more]
HTPG_RALEJ8.562e-3537.95Chaperone protein htpG OS=Ralstonia eutropha (stra... [more]
HTPG_BORA18.562e-3535.37Chaperone protein htpG OS=Bordetella avium (strain... [more]
HTPG_PSYCK1.460e-3437.66Chaperone protein htpG OS=Psychrobacter cryohalole... [more]
HTPG_NOCFA2.491e-3436.32Chaperone protein htpG OS=Nocardia farcinica GN=ht... [more]
HTPG_RALME3.253e-3437.05Chaperone protein htpG OS=Ralstonia metallidurans ... [more]

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Properties
Property NameValue
Genbank descriptionC05801B01SK FerrChloL1 Citrus clementina cDNA clone C05801B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296634 ID=CX296634; Name=CX296634; organism=Citrus clementina; type=EST; length=714bp
TTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCCAACGATGATGAGCAG
TACATCTGGGAGTCTCAGGCCGGTGGATCATTCACTGTTACCAGGGACAC
TTCTGGTGAGCTTCTTGGCCGCGGTACAAAGATCACTCTCCACCTCAAGG
AAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATTTGATTAAG
AAGCACTCTGAGTTCATTAGTTACCCAATTTCCCTCTGGATTGAGAAGAC
CACTGAGAAGGAGATTTCTGATGATGAGGACGAGGAAGAAAAGAAGGATG
AGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAGAGAAG
AAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTGAACAA
GCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAAGAAGAGT
ATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACTTGGCT
GTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATCCTCTT
TGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAAGCCCA
ATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACTGTGAG
GAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGA
GGATCTCCCTCTTA
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