CX296636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: Y2161_MYCVP (Uncharacterized oxidoreductase Mvan_2161 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_2161 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.301e-11 Identity = 39/115 (33.91%), Postives = 58/115 (50.43%), Query Frame = 2 Query: 146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFI 490 LN+ MP IGLG + GYR ID A YGNE +G + K + R +L++T+KL D + A+ +L+ L +DYVDLYL+HWP ++ ++ Sbjct: 12 LNDDNTMPVIGLGVGELSDAEAEQSVLAALEAGYRLIDTAAAYGNEAAVGRAIAK----SGVPRGELFVTTKLATDDLGFQSSQDALRASLERLGLDYVDLYLIHWPAGSQGTYV 122
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: YOF5_CAEEL (Uncharacterized oxidoreductase ZK1290.5 OS=Caenorhabditis elegans GN=ZK1290.5 PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11 Identity = 44/139 (31.65%), Postives = 72/139 (51.80%), Query Frame = 2 Query: 146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYD 562 L+N +MP IGLGT + GYR ID A YG EK++G +K + RE++++++KLW D ++V A + + LQ DY+D+Y++H P + +N ++ + TW+ ME LY+ Sbjct: 7 LSNNVEMPLIGLGTTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKNCS----VPREEMFLSTKLWPVD-CGDEVYNAFQTSCEKLQTDYLDMYMIHMP---QLPDWIVNQKETKE----KTWRQMELLYE 133
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: YER5_SCHPO (Uncharacterized oxidoreductase C2F3.05c OS=Schizosaccharomyces pombe GN=SPAC2F3.05c PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11 Identity = 36/110 (32.73%), Postives = 54/110 (49.09%), Query Frame = 2 Query: 137 YFELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWP 466 + +LNNG K P G++ GYRHID A Y NE + G + K E+ KRED+W TSKL + ++D +++ + Y+DL+L+H P Sbjct: 5 FVKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFMEETGTKREDIWFTSKLNDLS-GYKSTLSSIDASVKACGLGYIDLFLLHSP 113
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: YKW2_SCHPO (Uncharacterized oxidoreductase P32A8.02 OS=Schizosaccharomyces pombe GN=SPAP32A8.02 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11 Identity = 48/142 (33.80%), Postives = 65/142 (45.77%), Query Frame = 2 Query: 146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLW-CCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSG 568 L NG +P IG G + ++ GYRHID A YGNE G + E +KR D+++TSKL C D+ A+ +L L Y+DL+L+ P KK I ++WKAME DSG Sbjct: 13 LTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGKAIVDWCEKNNVKRTDIFLTSKLANCSDY--YSTRAAIRSSLHHLG-TYIDLFLIQSPAGGKKSRI-------------ASWKAMEEFVDSG 138 The following BLAST results are available for this feature:
BLAST of CX296636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 114
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296636 ID=CX296636; Name=CX296636; organism=Citrus clementina; type=EST; length=568bpback to top |