CX296636

Overview
NameCX296636
Unique NameCX296636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length568
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: ALD1_MOUSE (Aldose reductase-related protein 1 OS=Mus musculus GN=Akr1b7 PE=2 SV=4)

HSP 1 Score: 126.331 bits (316), Expect = 1.021e-28
Identity = 66/150 (44.00%), Postives = 87/150 (58.00%), Query Frame = 2
Query:  137 YFELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSG 568
            + EL+  AKMP +GLGTW++  G V          GYRHIDCAY Y NE E+G  +++  ++  +KREDL+I SKLW        V KA   TL DL++DY+DLYLVHWP   + G  +L P+D      L +      W+AME L D G
Sbjct:    4 FVELSTKAKMPLVGLGTWKSSPGQVKEAVKAAIDAGYRHIDCAYVYHNENEVGEAIQEKIKENAVKREDLFIVSKLWATFFEKSLVKKAFQNTLSDLKLDYLDLYLVHWPQGFQAG-NALLPKDNKGKVLLSKSTFLDAWEAMEELVDQG 152          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: A1A1A_DANRE (Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=akr1a1a PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.275e-28
Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGV-IKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQPD---IPSTWKAMEALYDSG 568
            L+ G +MP +GLGTW++  G V          GYRHIDCA  Y NE+E+G  L +    G  ++R+D+++TSKLW   H P+DV +A  R+L DL++ Y+DLYL+HWP+   +G   I  +P+  +Q D      TW AME L D G
Sbjct:    7 LSTGQRMPTVGLGTWKSAPGQVKQAVLAALDCGYRHIDCAAAYSNEREVGEALTERLGPGKSLRRDDIFVTSKLWNTKHHPDDVEEACRRSLSDLRLSYLDLYLIHWPMAFGRGDELIPRHPDGTIQYDDTHYRDTWAAMEKLVDQG 153          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: CRO_RANTE (Rho crystallin OS=Rana temporaria PE=2 SV=3)

HSP 1 Score: 124.405 bits (311), Expect = 3.881e-28
Identity = 63/150 (42.00%), Postives = 91/150 (60.67%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQH---GVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQP------DIPSTWKAMEALYDSG 568
            LN+G  MP +GLGT+ + H    +           GYRHIDCA+  GNE  IG  ++    DG +KRED++ T KLWC   +PE V K ++R+L+D+ +DY+DL+L+HWPV  K    S +P D  +P      D+ +TW+A+EA  D+G
Sbjct:   11 LNDGNMMPILGLGTYASPHVPKSLAEEAVKIAIDVGYRHIDCAFITGNEMHIGNGIRSKISDGTVKREDIFYTGKLWCTYFSPEMVRKGLERSLRDVGMDYLDLFLMHWPVSLKPSGAS-DPSDKDKPFIYDNVDLCATWEALEARKDAG 159          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AKCL2_PIG (1,5-anhydro-D-fructose reductase OS=Sus scrofa GN=AKR1E2 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.069e-28
Identity = 63/142 (44.37%), Postives = 82/142 (57.75%), Query Frame = 2
Query:  161 KMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSG 568
            K+P +GLGTWQA  G V          GYRH DCAY Y NE E+G  ++   ++GV++REDL+I SKLWC  H    V  A  R+L+ L++ Y+DLYL+HWP+  K G + L P D          D   TW+AME L   G
Sbjct:    3 KIPVLGLGTWQAAPGEVTEAVKVAIDTGYRHFDCAYLYHNENEVGVGIQAKIDEGVVRREDLFIVSKLWCTCHKKSLVKSACTRSLKALKLQYLDLYLIHWPMGFKPGEVDL-PVDRSGMIVASNTDFLDTWEAMEDLVIEG 143          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: ALRA_DICDI (Aldose reductase A OS=Dictyostelium discoideum GN=alrA PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.646e-28
Identity = 65/146 (44.52%), Postives = 86/146 (58.90%), Query Frame = 2
Query:  140 FELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFE-DGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQP--DIPSTWKAMEALYDSG 568
            F+L++G K+P +G GTW+A+  +V          GYRHIDCA  Y NEKE+G    K F  +  +KRED++ITSKLW   H  E V  A++RTL DL + Y+DLYLVHWPV  +     +      Q    I  TW+ ME L D+G
Sbjct:    5 FKLSSGHKIPLVGFGTWKAETTLVGKAVEVALDAGYRHIDCAAVYLNEKEVGEAFTKKFTTEATVKREDVFITSKLWNTFHKKEHVRPALERTLSDLGLQYLDLYLVHWPVAFEYTSNDIQTSGSTQEFVSIRETWEEMEKLVDAG 150          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: A1A1B_DANRE (Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=akr1a1b PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.129e-27
Identity = 65/147 (44.22%), Postives = 89/147 (60.54%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLF-EDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG---FISLNPEDLLQPDI--PSTWKAMEALYDSG 568
            L+ G KMP +GLGTW+++ G+V          GYRHIDCA  Y NE EIG   ++    D  I+RED+++TSKLW   H P+DV  ++ +TL+DL+++Y+DLYL+HWP   ++G   F       LL  DI    TW AME L   G
Sbjct:    7 LSTGRKMPLLGLGTWKSEPGLVKQAVIWALESGYRHIDCAPIYANEPEIGEAFQETMGPDKGIRREDVFVTSKLWNTKHHPDDVEPSLLKTLKDLKLEYLDLYLIHWPYAFQRGDTPFPRKEDGTLLYDDIDYKLTWAAMEKLVGKG 153          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AKCL2_MOUSE (1,5-anhydro-D-fructose reductase OS=Mus musculus GN=Akr1e2 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.926e-27
Identity = 63/141 (44.68%), Postives = 81/141 (57.45%), Query Frame = 2
Query:  164 MPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPS------TWKAMEALYDSG 568
            +P +GLGTW+A  G V          GYRH DCAY Y NE E+G  + +  ++GV+KREDL++ SKLWC  H    V  A   TL+ L +DY+DLYL+HWP+  K G   + P D     IPS      TW+AME L   G
Sbjct:    4 IPTVGLGTWKASPGEVTDAVKLAINLGYRHFDCAYLYHNESEVGMGISEKIKEGVVKREDLFVVSKLWCTCHKKSLVKTACTNTLEALNLDYLDLYLIHWPMGFKPGEKDI-PLDRNGKVIPSHTSFLDTWEAMEDLVFEG 143          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: XYL1_CANSH (NAD(P)H-dependent D-xylose reductase OS=Candida shehatae GN=XYL1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.516e-27
Identity = 59/154 (38.31%), Postives = 93/154 (60.39%), Query Frame = 2
Query:  140 FELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTK---------KGFISLNPEDLLQPDIP--STWKAMEALYDSG 568
            F+LNNG +MP IG G W+                GYR  D A  YGNE+E+G  +K+  ++G++ RE++++TSKLW   H P++V  A+++TL+DL++DYVDL+L+H+P+  K          GF   + ++ +  D+P   TWKA+E L  +G
Sbjct:    9 FKLNNGLEMPSIGFGCWKLDKSTAADQVYNAIKAGYRLFDGAEDYGNEQEVGEGVKRAIDEGIVTREEIFLTSKLWNNYHDPKNVETALNKTLKDLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFVYEDVPILETWKALEKLVKAG 162          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AKCL2_RAT (1,5-anhydro-D-fructose reductase OS=Rattus norvegicus GN=Akr1e2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.516e-27
Identity = 63/142 (44.37%), Postives = 83/142 (58.45%), Query Frame = 2
Query:  161 KMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPS------TWKAMEALYDSG 568
            ++P +GLGTW+A  G V          GYRH DCAY Y NE E+G  +K+  ++GV+KR++L+I SKLWC  H    V  A   TL+ L +DY+DLYL+HWP+  K G   + P D     IPS      TW+AME L   G
Sbjct:    3 QIPTVGLGTWKASPGEVTDAVKVAINLGYRHFDCAYLYHNESEVGMGIKEKIKEGVVKRDELFIVSKLWCTYHKQSLVKTACINTLEALNLDYLDLYLIHWPMGFKPGDKDI-PLDRSGKVIPSHTSFLDTWEAMEDLVIEG 143          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AKC1H_RAT (Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus GN=Akr1c18 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.516e-27
Identity = 64/158 (40.51%), Postives = 91/158 (57.59%), Query Frame = 2
Query:  122 NDNVQYFELNNGAKMPPIGLGTWQAQHGV---VXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSG 568
            N  +Q  ELN+G  +P +G GT+  +  +              G+RHIDC++ Y NE+EIG  +    EDG +KRED++ TSKLW   H PE V  +++ +L+ L +DYVDLYL+H+PV  K G   L P+D      L   D+  TW+AME   D+G
Sbjct:    2 NSKIQKMELNDGHSIPVLGFGTYATEENLRKKSMESTKIAIDVGFRHIDCSHLYQNEEEIGQAIVSKIEDGTVKREDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVSLKPG-DELLPQDEHGNLILDTVDLCDTWEAMEKCKDAG 158          
The following BLAST results are available for this feature:
BLAST of CX296636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
ALD1_MOUSE1.021e-2844.00Aldose reductase-related protein 1 OS=Mus musculus... [more]
A1A1A_DANRE2.275e-2842.86Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=... [more]
CRO_RANTE3.881e-2842.00Rho crystallin OS=Rana temporaria PE=2 SV=3[more]
AKCL2_PIG5.069e-2844.371,5-anhydro-D-fructose reductase OS=Sus scrofa GN=... [more]
ALRA_DICDI8.646e-2844.52Aldose reductase A OS=Dictyostelium discoideum GN=... [more]
A1A1B_DANRE1.129e-2744.22Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=... [more]
AKCL2_MOUSE1.926e-2744.681,5-anhydro-D-fructose reductase OS=Mus musculus G... [more]
XYL1_CANSH2.516e-2738.31NAD(P)H-dependent D-xylose reductase OS=Candida sh... [more]
AKCL2_RAT2.516e-2744.371,5-anhydro-D-fructose reductase OS=Rattus norvegi... [more]
AKC1H_RAT2.516e-2740.51Aldo-keto reductase family 1 member C18 OS=Rattus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05801B03SK FerrChloL1 Citrus clementina cDNA clone C05801B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296636 ID=CX296636; Name=CX296636; organism=Citrus clementina; type=EST; length=568bp
GAGGAATTTCTGCCATCTCCCCGCAAATTCAATCTCATCTCTCCACAAAT
TAAAAGGCCAGTGATCACTCACTGCCCCTGGTCATTTCACACACATAACT
CGGGAAATGGACCAAATAGCAAACGATAACGTTCAATACTTCGAGTTGAA
CAATGGAGCCAAAATGCCGCCTATCGGATTAGGCACATGGCAGGCTCAAC
ATGGTGTTGTTGCCGAAGCCATTGCTATTGCCATCAAGGCTGGATACCGT
CATATCGATTGTGCTTATTTCTATGGCAATGAAAAGGAGATTGGTACCGA
GCTGAAGAAACTGTTTGAAGATGGAGTGATCAAGCGTGAGGATCTATGGA
TCACCTCCAAGCTCTGGTGTTGTGATCATGCACCAGAAGATGTACCAAAG
GCAATGGACAGAACTTTGCAGGACTTGCAGATTGATTACGTGGATTTGTA
CCTCGTGCACTGGCCAGTGCGAACGAAGAAGGGATTTATAAGCCTCAATC
CCGAAGACCTTCTTCAACCAGATATACCAAGCACATGGAAAGCAATGGAG
GCACTTTATGATTCTGGC
back to top