CX296636

Overview
NameCX296636
Unique NameCX296636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length568
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14483 contig Ccv1_Contig14483:20..590. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: PGFS2_BOVIN (Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.910e-23
Identity = 56/153 (36.60%), Postives = 87/153 (56.86%), Query Frame = 2
Query:  134 QYFELNNGAKMPPIGLGTWQAQH---GVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLL---QPDIPSTWKAMEALYDSG 568
            Q  + N+G  +P +G GT+  +                 G+RH+D A+ Y NE+++G  ++    DG +KRED++ TSKLWC    PE V  A++++LQ+LQ+DYVDLY++H PV  K G  F+  +    L     D+  TW+A+E   D+G
Sbjct:    6 QRVKFNDGHFIPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKPGNKFVPKDESGKLIFDSVDLCHTWEALEKCKDAG 158          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1D1_RAT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus norvegicus GN=Akr1d1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.910e-23
Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = 2
Query:  137 YFELNNGAKMPPIGLGTWQAQH---GVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSG 568
            +  LN+G  +P IGLGT+       G            GYRHID AY Y NE E+G  +++   +G +KRE+++   KLW  DH PE V  A++RTLQ L++DY+DLY++  P+  K G     P+D        + ++ +TW+A+EA  D+G
Sbjct:    9 HIPLNDGNSIPIIGLGTYSDPRPVPGKTFIAVKTAIDEGYRHIDGAYVYRNEHEVGEAIREKVAEGKVKREEIFYCGKLWSTDHDPEMVRPALERTLQTLKLDYIDLYIIEMPMAFKPG-EEFYPKDENGRVIYHKSNLCATWEALEACKDAG 160          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AKCL2_HUMAN (1,5-anhydro-D-fructose reductase OS=Homo sapiens GN=AKR1E2 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 6.412e-23
Identity = 48/114 (42.11%), Postives = 72/114 (63.16%), Query Frame = 2
Query:  164 MPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPE 505
            +P +GL +W+A  G V          GYRH DCAYFY NE+E+G  ++   ++G ++REDL+I +KLWC  H    V  A  ++L+ L+++Y+DLYL+HWP+    GF   +PE
Sbjct:    4 IPAVGLSSWKASPGKVTEAVKEAIDAGYRHFDCAYFYHNEREVGAGIRCKIKEGAVRREDLFIATKLWCTCHKKSLVETACRKSLKALKLNYLDLYLIHWPM----GFKPPHPE 113          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1C3_PONAB (Aldo-keto reductase family 1 member C3 homolog OS=Pongo abelii GN=AKR1C3 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.412e-23
Identity = 59/154 (38.31%), Postives = 86/154 (55.84%), Query Frame = 2
Query:  134 QYFELNNGAKMPPIGLGTW---QAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSG 568
            Q  +LN+G  MP +G GT+   +                G+RHID A+ Y NE+++G  ++    DG +KRED++ TSKLW   H PE V  A++ +L+  Q+DYVDLYL+H P+  K G   L+P D          D+ +TW+AME   D+G
Sbjct:    6 QCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPG-EELSPTDENGKVIFDIVDLCTTWEAMEECKDAG 158          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1C3_HUMAN (Aldo-keto reductase family 1 member C3 OS=Homo sapiens GN=AKR1C3 PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 6.412e-23
Identity = 59/154 (38.31%), Postives = 86/154 (55.84%), Query Frame = 2
Query:  134 QYFELNNGAKMPPIGLGTW---QAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSG 568
            Q  +LN+G  MP +G GT+   +                G+RHID A+ Y NE+++G  ++    DG +KRED++ TSKLW   H PE V  A++ +L+  Q+DYVDLYL+H P+  K G   L+P D          D+ +TW+AME   D+G
Sbjct:    6 QCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPG-EELSPTDENGKVIFDIVDLCTTWEAMEKCKDAG 158          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: XYL1_CANPA (NADH-dependent D-xylose reductase OS=Candida parapsilosis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 8.375e-23
Identity = 55/153 (35.95%), Postives = 87/153 (56.86%), Query Frame = 2
Query:  143 ELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTK---------KGFISLNPEDLLQPDIP--STWKAMEALYDSG 568
            +LN+G ++P +G G W+  + V           GYR  D A  Y NE+E+G  +K+  ++G++KRE+L+ITSKLW   H  ++V  A+ +TL DL +DYVDL+ +H+P+  K          GF   + +     ++P   TW+A+E L D G
Sbjct:   11 KLNSGYEIPLVGFGCWKLTNDVASDQIYRAIKSGYRLFDGAEDYANEQEVGEGIKRAIKEGIVKREELFITSKLWNSFHDKKNVEVALMKTLSDLNLDYVDLFYIHFPIAQKPVPIEKKYPPGFYCGDGDKWSIEEVPLLDTWRALEKLVDQG 163          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1CD_MOUSE (Aldo-keto reductase family 1 member C13 OS=Mus musculus GN=Akr1c13 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 8.375e-23
Identity = 58/150 (38.67%), Postives = 88/150 (58.67%), Query Frame = 2
Query:  143 ELNNGAKMPPIGLGTWQAQH---GVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF----ISLNPEDLLQP-DIPSTWKAMEALYDSG 568
            +LN+G  +P +G GT++ +                 GYRH+D AY Y  E+EIG  ++   + GV+KREDL+IT+KLWC    PE V  A++++L+ LQ+DYVDLY++H+PV  K G     ++   + LL   D   TW+ +E   D+G
Sbjct:    9 KLNDGHLIPALGFGTYKPKEVPKSKSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQSKIKAGVVKREDLFITTKLWCTCFRPELVKPALEKSLKKLQLDYVDLYIMHYPVPMKSGDNDFPVNEQGKSLLDTVDFCDTWERLEECKDAG 158          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: DDBX_BOVIN (Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.094e-22
Identity = 55/153 (35.95%), Postives = 87/153 (56.86%), Query Frame = 2
Query:  134 QYFELNNGAKMPPIGLGTW---QAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQP-----DIPSTWKAMEALYDSG 568
            Q  +LN+G  +P +G GT+   +                G+RHID A+ Y NE+++G  ++    DG +KRED++ TSKLW     PE V  A++++L +LQ+DYVDLY++H+PV  K G      ++  +P     D+  TW+A+E   D+G
Sbjct:    6 QRVKLNDGHFIPVLGFGTFAPREVPKSEALEVTKFAIEAGFRHIDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWSTSLRPELVRPALEKSLNNLQLDYVDLYIIHFPVALKPGETLFPTDENGKPIFDSVDLCRTWEALEKCKDAG 158          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: DIDH_RAT (3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus GN=Akr1c9 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.182e-22
Identity = 58/150 (38.67%), Postives = 82/150 (54.67%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTW---QAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSG 568
            LN+G  +P +G GT    +     V          G+RH D AY Y  E+E+G  ++   EDG +KRED++ TSKLW   H PE V   +++TL+  Q+DYVDLY++H+P+  + G I   P D          DI  TW+AME   D+G
Sbjct:   10 LNDGNFIPVLGFGTTVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFF-PRDEHGKLLFETVDICDTWEAMEKCKDAG 158          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1D1_HUMAN (3-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapiens GN=AKR1D1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.182e-22
Identity = 57/151 (37.75%), Postives = 85/151 (56.29%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQ----AQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSG 568
            L++G  +P IGLGT+        G            GYRHID AY Y NE E+G  +++   +G ++RED++   KLW  +H PE V   ++RTL+ LQ+DYVDLY++  P+  K G   + P D        + ++ +TW+AMEA  D+G
Sbjct:   12 LSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPG-DEIYPRDENGKWLYHKSNLCATWEAMEACKDAG 161          
The following BLAST results are available for this feature:
BLAST of CX296636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
PGFS2_BOVIN4.910e-2336.60Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1[more]
AK1D1_RAT4.910e-2337.913-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus nor... [more]
AKCL2_HUMAN6.412e-2342.111,5-anhydro-D-fructose reductase OS=Homo sapiens G... [more]
AK1C3_PONAB6.412e-2338.31Aldo-keto reductase family 1 member C3 homolog OS=... [more]
AK1C3_HUMAN6.412e-2338.31Aldo-keto reductase family 1 member C3 OS=Homo sap... [more]
XYL1_CANPA8.375e-2335.95NADH-dependent D-xylose reductase OS=Candida parap... [more]
AK1CD_MOUSE8.375e-2338.67Aldo-keto reductase family 1 member C13 OS=Mus mus... [more]
DDBX_BOVIN1.094e-2235.95Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=... [more]
DIDH_RAT3.182e-2238.673-alpha-hydroxysteroid dehydrogenase OS=Rattus nor... [more]
AK1D1_HUMAN3.182e-2237.753-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionC05801B03SK FerrChloL1 Citrus clementina cDNA clone C05801B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296636 ID=CX296636; Name=CX296636; organism=Citrus clementina; type=EST; length=568bp
GAGGAATTTCTGCCATCTCCCCGCAAATTCAATCTCATCTCTCCACAAAT
TAAAAGGCCAGTGATCACTCACTGCCCCTGGTCATTTCACACACATAACT
CGGGAAATGGACCAAATAGCAAACGATAACGTTCAATACTTCGAGTTGAA
CAATGGAGCCAAAATGCCGCCTATCGGATTAGGCACATGGCAGGCTCAAC
ATGGTGTTGTTGCCGAAGCCATTGCTATTGCCATCAAGGCTGGATACCGT
CATATCGATTGTGCTTATTTCTATGGCAATGAAAAGGAGATTGGTACCGA
GCTGAAGAAACTGTTTGAAGATGGAGTGATCAAGCGTGAGGATCTATGGA
TCACCTCCAAGCTCTGGTGTTGTGATCATGCACCAGAAGATGTACCAAAG
GCAATGGACAGAACTTTGCAGGACTTGCAGATTGATTACGTGGATTTGTA
CCTCGTGCACTGGCCAGTGCGAACGAAGAAGGGATTTATAAGCCTCAATC
CCGAAGACCTTCTTCAACCAGATATACCAAGCACATGGAAAGCAATGGAG
GCACTTTATGATTCTGGC
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